RNA–Protein interactions for RNA: ENST00000459711.5

CHRD-207, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 503 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-207ENST00000459711 TSPYL6Q8N831 410 aa25.54■■□□□ 1.68
CHRD-207ENST00000459711 CD99L2Q8TCZ2 262 aa25.54■■□□□ 1.68
CHRD-207ENST00000459711 ARMC5Q96C12 935 aa25.54■■□□□ 1.68
CHRD-207ENST00000459711 MPHOSPH8Q99549 860 aa25.54■■□□□ 1.68
CHRD-207ENST00000459711 KCNJ4P48050 445 aa25.53■■□□□ 1.68
CHRD-207ENST00000459711 CRHR2Q13324 411 aa25.53■■□□□ 1.68
CHRD-207ENST00000459711 PCDHAC2Q9Y5I4 1007 aa25.53■■□□□ 1.68
CHRD-207ENST00000459711 IRS2Q9Y4H2 1338 aa25.53■■□□□ 1.68
CHRD-207ENST00000459711 GJA5P36382 358 aa25.52■■□□□ 1.68
CHRD-207ENST00000459711 CHRNDQ07001 517 aa25.52■■□□□ 1.68
CHRD-207ENST00000459711 SUPT20HL1Q3ZLR7 823 aa25.52■■□□□ 1.68
CHRD-207ENST00000459711 OTUD7BQ6GQQ9 843 aa25.52■■□□□ 1.68
CHRD-207ENST00000459711 EFCC1Q9HA90 598 aa25.52■■□□□ 1.68
CHRD-207ENST00000459711 SPDYE2BA6NHP3 402 aa25.51■■□□□ 1.67
CHRD-207ENST00000459711 SPDYE6P0CI01 402 aa25.51■■□□□ 1.67
CHRD-207ENST00000459711 CLRN2A0PK11 232 aa25.5■■□□□ 1.67
CHRD-207ENST00000459711 TESPA1A2RU30 521 aaPredicted RBP25.5■■□□□ 1.67
CHRD-207ENST00000459711 MYO1BO43795 1136 aa25.5■■□□□ 1.67
CHRD-207ENST00000459711 CSF1RP07333 972 aa25.5■■□□□ 1.67
CHRD-207ENST00000459711 IREB2P48200 963 aaKnown RBP25.5■■□□□ 1.67
CHRD-207ENST00000459711 CFAP100Q494V2 611 aa25.5■■□□□ 1.67
CHRD-207ENST00000459711 C15orf52Q6ZUT6 534 aaKnown RBP25.5■■□□□ 1.67
CHRD-207ENST00000459711 STK31Q9BXU1 1019 aa25.5■■□□□ 1.67
CHRD-207ENST00000459711 USP2O75604 605 aaPredicted RBP25.49■■□□□ 1.67
CHRD-207ENST00000459711 EN2P19622 333 aaPredicted RBP25.49■■□□□ 1.67
CHRD-207ENST00000459711 CASP7P55210 303 aa25.49■■□□□ 1.67
CHRD-207ENST00000459711 SP3Q02447 781 aa25.49■■□□□ 1.67
CHRD-207ENST00000459711 DDX10Q13206 875 aaKnown RBP25.49■■□□□ 1.67
CHRD-207ENST00000459711 GCKRQ14397 625 aa25.49■■□□□ 1.67
CHRD-207ENST00000459711 NBPF12Q5TAG4 269 aaPredicted RBP25.49■■□□□ 1.67
CHRD-207ENST00000459711 PTPN18Q99952 460 aa25.49■■□□□ 1.67
CHRD-207ENST00000459711 OTOFQ9HC10 1997 aa25.48■■□□□ 1.67
CHRD-207ENST00000459711 SNAP23O00161 211 aa25.48■■□□□ 1.67
CHRD-207ENST00000459711 FXR1P51114 621 aaKnown RBP eCLIP25.48■■□□□ 1.67
CHRD-207ENST00000459711 FKBP1AP62942 108 aaKnown RBP25.48■■□□□ 1.67
CHRD-207ENST00000459711 CAP1Q01518 475 aa25.48■■□□□ 1.67
CHRD-207ENST00000459711 G2E3Q7L622 706 aa25.48■■□□□ 1.67
CHRD-207ENST00000459711 ANKRD13AQ8IZ07 590 aa25.48■■□□□ 1.67
CHRD-207ENST00000459711 PRMT6Q96LA8 375 aaPredicted RBP25.48■■□□□ 1.67
CHRD-207ENST00000459711 VEZTQ9HBM0 779 aa25.48■■□□□ 1.67
CHRD-207ENST00000459711 A0A1B0GUL6 1792 aa25.48■■□□□ 1.67
CHRD-207ENST00000459711 AOX1Q06278 1338 aa25.47■■□□□ 1.67
CHRD-207ENST00000459711 F8W031 263 aaPredicted RBP25.47■■□□□ 1.67
CHRD-207ENST00000459711 IL1R1P14778 569 aa25.46■■□□□ 1.67
CHRD-207ENST00000459711 TAF5LO75529 589 aa25.45■■□□□ 1.66
CHRD-207ENST00000459711 RASA3Q14644 834 aa25.45■■□□□ 1.66
CHRD-207ENST00000459711 ZNF804AQ7Z570 1209 aa25.45■■□□□ 1.66
CHRD-207ENST00000459711 ZNF333Q96JL9 665 aa25.45■■□□□ 1.66
CHRD-207ENST00000459711 ANKRD18BA2A2Z9 1011 aa25.44■■□□□ 1.66
CHRD-207ENST00000459711 TSR2Q969E8 191 aaKnown RBP25.44■■□□□ 1.66
CHRD-207ENST00000459711 TMEM106CQ9BVX2 250 aa25.44■■□□□ 1.66
CHRD-207ENST00000459711 MYH16Q9H6N6 1097 aa25.44■■□□□ 1.66
CHRD-207ENST00000459711 HELBQ8NG08 1087 aaPredicted RBP25.43■■□□□ 1.66
CHRD-207ENST00000459711 OPTNQ96CV9 577 aa25.43■■□□□ 1.66
CHRD-207ENST00000459711 MS4A4AQ96JQ5 239 aa25.43■■□□□ 1.66
CHRD-207ENST00000459711 CEP290O15078 2479 aa25.43■■□□□ 1.66
CHRD-207ENST00000459711 SLC4A2P04920 1241 aa25.42■■□□□ 1.66
CHRD-207ENST00000459711 ELP3Q9H9T3 547 aa25.42■■□□□ 1.66
CHRD-207ENST00000459711 JAG2Q9Y219 1238 aa25.41■■□□□ 1.66
CHRD-207ENST00000459711 RBM5P52756 815 aaKnown RBP eCLIP25.4■■□□□ 1.66
CHRD-207ENST00000459711 FLIIQ13045 1269 aa25.4■■□□□ 1.66
CHRD-207ENST00000459711 TNFAIP1Q13829 316 aa25.4■■□□□ 1.66
CHRD-207ENST00000459711 TWISTNBQ3B726 338 aaPredicted RBP25.4■■□□□ 1.66
CHRD-207ENST00000459711 LINS1Q8NG48 757 aa25.4■■□□□ 1.66
CHRD-207ENST00000459711 ARHGEF6Q15052 776 aa25.39■■□□□ 1.66
CHRD-207ENST00000459711 SPDYE2Q495Y8 402 aa25.39■■□□□ 1.66
CHRD-207ENST00000459711 SLC9C1Q4G0N8 1177 aa25.39■■□□□ 1.66
CHRD-207ENST00000459711 NBPF11Q86T75 865 aa25.39■■□□□ 1.66
CHRD-207ENST00000459711 DNAAF4Q8WXU2 420 aa25.39■■□□□ 1.66
CHRD-207ENST00000459711 BRI3BPQ8WY22 251 aa25.39■■□□□ 1.66
CHRD-207ENST00000459711 PRKRIP1Q9H875 184 aaPredicted RBP25.39■■□□□ 1.66
CHRD-207ENST00000459711 PTCH2Q9Y6C5 1203 aa25.39■■□□□ 1.66
CHRD-207ENST00000459711 TRIOBPQ9H2D6 2365 aa25.39■■□□□ 1.65
CHRD-207ENST00000459711 IFIT5Q13325 482 aaKnown RBP25.38■■□□□ 1.65
CHRD-207ENST00000459711 ZFYVE28Q9HCC9 887 aa25.38■■□□□ 1.65
CHRD-207ENST00000459711 COLQQ9Y215 455 aaPredicted RBP25.38■■□□□ 1.65
CHRD-207ENST00000459711 FOXO4P98177 505 aa25.37■■□□□ 1.65
CHRD-207ENST00000459711 TAF1CQ15572 869 aaPredicted RBP25.37■■□□□ 1.65
CHRD-207ENST00000459711 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.37■■□□□ 1.65
CHRD-207ENST00000459711 ZNF70Q9UC06 446 aaPredicted RBP25.37■■□□□ 1.65
CHRD-207ENST00000459711 FAM205AQ6ZU69 1335 aa25.37■■□□□ 1.65
CHRD-207ENST00000459711 CCL15-CCL14A0A0B4J2E2 113 aa25.36■■□□□ 1.65
CHRD-207ENST00000459711 FKBP5Q13451 457 aaPredicted RBP25.36■■□□□ 1.65
CHRD-207ENST00000459711 CCL15Q16663 113 aa25.36■■□□□ 1.65
CHRD-207ENST00000459711 CNKSR2Q8WXI2 1034 aa25.36■■□□□ 1.65
CHRD-207ENST00000459711 TEPSINQ96N21 525 aa25.36■■□□□ 1.65
CHRD-207ENST00000459711 CACNA1FO60840 1977 aa25.36■■□□□ 1.65
CHRD-207ENST00000459711 GTF2A2P52657 109 aa25.35■■□□□ 1.65
CHRD-207ENST00000459711 SLC4A8Q2Y0W8 1093 aa25.35■■□□□ 1.65
CHRD-207ENST00000459711 CDAN1Q8IWY9 1227 aa25.35■■□□□ 1.65
CHRD-207ENST00000459711 SERPINA10Q9UK55 444 aa25.35■■□□□ 1.65
CHRD-207ENST00000459711 ARAP2Q8WZ64 1704 aa25.34■■□□□ 1.65
CHRD-207ENST00000459711 VGLL4Q14135 290 aa25.34■■□□□ 1.65
CHRD-207ENST00000459711 MFSD14BQ5SR56 506 aa25.34■■□□□ 1.65
CHRD-207ENST00000459711 FAM43AQ8N2R8 423 aa25.34■■□□□ 1.65
CHRD-207ENST00000459711 TDRD3Q9H7E2 651 aaKnown RBP25.34■■□□□ 1.65
CHRD-207ENST00000459711 CHMP3Q9Y3E7 222 aa25.34■■□□□ 1.65
CHRD-207ENST00000459711 MAP3K9P80192 1104 aa25.33■■□□□ 1.65
CHRD-207ENST00000459711 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.33■■□□□ 1.65
CHRD-207ENST00000459711 TTF2Q9UNY4 1162 aaKnown RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms