RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 HOXB7P09629 217 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 PPP4R3BQ5MIZ7 849 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 FAM173BQ6P4H8 233 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 BABAM1Q9NWV8 329 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 TRPM2O94759 1503 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 RIMBP2O15034 1052 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 ITGA6P23229 1130 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 CLCN1P35523 988 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 BRAPQ7Z569 592 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 FAM227BQ96M60 508 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 TFCP2L1Q9NZI6 479 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 SPDYE4A6NLX3 237 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 DTNBO60941 627 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 MCM7P33993 719 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 KRT79Q5XKE5 535 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 SMARCC2Q8TAQ2 1214 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 DRC1Q96MC2 740 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 DNAI2Q9GZS0 605 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 A0A1B0GVL5 298 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 B4E1Z4 1266 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 POTEB2H3BUK9 544 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 PLCG2P16885 1265 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 SBNO1A3KN83 1393 aa13.34□□□□□ -0.27
SMARCAD1-204ENST00000457823 BICD1Q96G01 975 aa13.34□□□□□ -0.27
SMARCAD1-204ENST00000457823 TAOK3Q9H2K8 898 aa13.34□□□□□ -0.27
SMARCAD1-204ENST00000457823 HELLSQ9NRZ9 838 aa13.34□□□□□ -0.27
SMARCAD1-204ENST00000457823 HDAC9Q9UKV0 1011 aa13.34□□□□□ -0.27
SMARCAD1-204ENST00000457823 DYNC1I1O14576 645 aa13.34□□□□□ -0.27
SMARCAD1-204ENST00000457823 EHBP1Q8NDI1 1231 aa13.34□□□□□ -0.27
SMARCAD1-204ENST00000457823 SGSM2O43147 1006 aa13.34□□□□□ -0.27
SMARCAD1-204ENST00000457823 ZNF496Q96IT1 587 aaPredicted RBP13.34□□□□□ -0.27
SMARCAD1-204ENST00000457823 PLIN2Q99541 437 aa13.34□□□□□ -0.27
SMARCAD1-204ENST00000457823 NDUFB9Q9Y6M9 179 aa13.34□□□□□ -0.27
SMARCAD1-204ENST00000457823 BMS1Q14692 1282 aaKnown RBP13.33□□□□□ -0.27
SMARCAD1-204ENST00000457823 RRP36Q96EU6 259 aaKnown RBP13.33□□□□□ -0.27
SMARCAD1-204ENST00000457823 GNPATO15228 680 aa13.33□□□□□ -0.28
SMARCAD1-204ENST00000457823 KRT2P35908 639 aa13.33□□□□□ -0.28
SMARCAD1-204ENST00000457823 ANKRD2Q9GZV1 360 aa13.33□□□□□ -0.28
SMARCAD1-204ENST00000457823 VEZTQ9HBM0 779 aa13.33□□□□□ -0.28
SMARCAD1-204ENST00000457823 IFNKQ9P0W0 207 aa13.33□□□□□ -0.28
SMARCAD1-204ENST00000457823 RTL9Q8NET4 1388 aa13.33□□□□□ -0.28
SMARCAD1-204ENST00000457823 SLC27A2O14975 620 aa13.33□□□□□ -0.28
SMARCAD1-204ENST00000457823 RPS6KB1P23443 525 aa13.33□□□□□ -0.28
SMARCAD1-204ENST00000457823 ARID5AQ03989 594 aa13.33□□□□□ -0.28
SMARCAD1-204ENST00000457823 CTR9Q6PD62 1173 aa13.33□□□□□ -0.28
SMARCAD1-204ENST00000457823 SUCLG2Q96I99 432 aa13.33□□□□□ -0.28
SMARCAD1-204ENST00000457823 NCOA5Q9HCD5 579 aaKnown RBP13.33□□□□□ -0.28
SMARCAD1-204ENST00000457823 EDC4Q6P2E9 1401 aaKnown RBP13.33□□□□□ -0.28
SMARCAD1-204ENST00000457823 WDR62O43379 1518 aa13.33□□□□□ -0.28
SMARCAD1-204ENST00000457823 SPDYE3A6NKU9 549 aa13.33□□□□□ -0.28
SMARCAD1-204ENST00000457823 GNA11P29992 359 aa13.33□□□□□ -0.28
SMARCAD1-204ENST00000457823 DTHD1Q6ZMT9 781 aa13.33□□□□□ -0.28
SMARCAD1-204ENST00000457823 PAXIP1Q6ZW49 1069 aaPredicted RBP13.33□□□□□ -0.28
SMARCAD1-204ENST00000457823 IQUBQ8NA54 791 aa13.33□□□□□ -0.28
SMARCAD1-204ENST00000457823 SHANK2Q9UPX8 1470 aa13.33□□□□□ -0.28
SMARCAD1-204ENST00000457823 KIAA0556O60303 1618 aa13.32□□□□□ -0.28
SMARCAD1-204ENST00000457823 EIF2AK4Q9P2K8 1649 aaKnown RBP13.32□□□□□ -0.28
SMARCAD1-204ENST00000457823 XAGE2Q96GT9 111 aa13.32□□□□□ -0.28
SMARCAD1-204ENST00000457823 SNX14Q9Y5W7 946 aa13.32□□□□□ -0.28
SMARCAD1-204ENST00000457823 GTF2F1P35269 517 aaKnown RBP eCLIP13.32□□□□□ -0.28
SMARCAD1-204ENST00000457823 PRDM1O75626 825 aa13.32□□□□□ -0.28
SMARCAD1-204ENST00000457823 CCDC172P0C7W6 258 aa13.32□□□□□ -0.28
SMARCAD1-204ENST00000457823 GCKRQ14397 625 aa13.32□□□□□ -0.28
SMARCAD1-204ENST00000457823 MAATS1Q7Z4T9 603 aa13.32□□□□□ -0.28
SMARCAD1-204ENST00000457823 TRERF1Q96PN7 1200 aa13.32□□□□□ -0.28
SMARCAD1-204ENST00000457823 SLC52A2Q9HAB3 445 aa13.32□□□□□ -0.28
SMARCAD1-204ENST00000457823 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.32□□□□□ -0.28
SMARCAD1-204ENST00000457823 V9GYY5 206 aaPredicted RBP13.32□□□□□ -0.28
SMARCAD1-204ENST00000457823 KIAA0753Q2KHM9 967 aa13.31□□□□□ -0.28
SMARCAD1-204ENST00000457823 RBM26Q5T8P6 1007 aaKnown RBP13.31□□□□□ -0.28
SMARCAD1-204ENST00000457823 APPBP2Q92624 585 aa13.31□□□□□ -0.28
SMARCAD1-204ENST00000457823 CTAGE15A4D2H0 777 aa13.31□□□□□ -0.28
SMARCAD1-204ENST00000457823 CTAGE8P0CG41 777 aa13.31□□□□□ -0.28
SMARCAD1-204ENST00000457823 KRT13P13646 458 aa13.31□□□□□ -0.28
SMARCAD1-204ENST00000457823 CTAGE6Q86UF2 777 aa13.31□□□□□ -0.28
SMARCAD1-204ENST00000457823 CTAGE4Q8IX94 777 aa13.31□□□□□ -0.28
SMARCAD1-204ENST00000457823 DNAJC10Q8IXB1 793 aa13.31□□□□□ -0.28
SMARCAD1-204ENST00000457823 TCHPQ9BT92 498 aa13.31□□□□□ -0.28
SMARCAD1-204ENST00000457823 VWA3AA6NCI4 1184 aa13.31□□□□□ -0.28
SMARCAD1-204ENST00000457823 GPAA1O43292 621 aa13.31□□□□□ -0.28
SMARCAD1-204ENST00000457823 IFI16Q16666 785 aaKnown RBP13.31□□□□□ -0.28
SMARCAD1-204ENST00000457823 OTUD7BQ6GQQ9 843 aa13.31□□□□□ -0.28
SMARCAD1-204ENST00000457823 KBTBD3Q8NAB2 608 aa13.31□□□□□ -0.28
SMARCAD1-204ENST00000457823 FERMT2Q96AC1 680 aa13.31□□□□□ -0.28
SMARCAD1-204ENST00000457823 CCDC42Q96M95 316 aa13.31□□□□□ -0.28
SMARCAD1-204ENST00000457823 ARMT1Q9H993 441 aa13.31□□□□□ -0.28
SMARCAD1-204ENST00000457823 KDM2BQ8NHM5 1336 aa13.31□□□□□ -0.28
SMARCAD1-204ENST00000457823 GCOM1H8Y6P7 765 aaPredicted RBP13.3□□□□□ -0.28
SMARCAD1-204ENST00000457823 CCDC175P0C221 793 aa13.3□□□□□ -0.28
SMARCAD1-204ENST00000457823 MYZAPP0CAP1 466 aa13.3□□□□□ -0.28
SMARCAD1-204ENST00000457823 ZNF174Q15697 407 aa13.3□□□□□ -0.28
SMARCAD1-204ENST00000457823 CCDC91Q7Z6B0 441 aa13.3□□□□□ -0.28
SMARCAD1-204ENST00000457823 TBC1D5Q92609 795 aa13.3□□□□□ -0.28
SMARCAD1-204ENST00000457823 ARFGAP3Q9NP61 516 aa13.3□□□□□ -0.28
SMARCAD1-204ENST00000457823 DENND2AQ9ULE3 1009 aa13.3□□□□□ -0.28
SMARCAD1-204ENST00000457823 MCM6Q14566 821 aa13.3□□□□□ -0.28
SMARCAD1-204ENST00000457823 TRAPPC3LQ5T215 181 aa13.3□□□□□ -0.28
SMARCAD1-204ENST00000457823 GOLGA6L10A0A0M3HER8 536 aa13.3□□□□□ -0.28
SMARCAD1-204ENST00000457823 TAF5LO75529 589 aa13.3□□□□□ -0.28
SMARCAD1-204ENST00000457823 UBE4AQ14139 1066 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms