RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, human

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-210	ENST00000457373	POTEJ	P0CG39	1038 aa		12.51	□□□□□ -0.41
RFX3-210	ENST00000457373	RRP1	P56182	461 aa	Known RBP	12.51	□□□□□ -0.41
RFX3-210	ENST00000457373	GTF2I	P78347	998 aa		12.51	□□□□□ -0.41
RFX3-210	ENST00000457373	G3BP1	Q13283	466 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
RFX3-210	ENST00000457373	TMEM132A	Q24JP5	1023 aa		12.51	□□□□□ -0.41
RFX3-210	ENST00000457373	USP17L1	Q7RTZ2	530 aa		12.51	□□□□□ -0.41
RFX3-210	ENST00000457373	CHMP4B	Q9H444	224 aa	Known RBP	12.51	□□□□□ -0.41
RFX3-210	ENST00000457373	GPRC5D	Q9NZD1	345 aa		12.51	□□□□□ -0.41
RFX3-210	ENST00000457373	CNOT7	Q9UIV1	285 aa	Known RBP	12.51	□□□□□ -0.41
RFX3-210	ENST00000457373	SHTN1	A0MZ66	631 aa		12.5	□□□□□ -0.41
RFX3-210	ENST00000457373	IFIT1	P09914	478 aa	Known RBP	12.5	□□□□□ -0.41
RFX3-210	ENST00000457373	SLC5A1	P13866	664 aa		12.5	□□□□□ -0.41
RFX3-210	ENST00000457373	HIBADH	P31937	336 aa	Known RBP	12.5	□□□□□ -0.41
RFX3-210	ENST00000457373	PUM3	Q15397	648 aa	Known RBP	12.5	□□□□□ -0.41
RFX3-210	ENST00000457373	TTLL5	Q6EMB2	1281 aa		12.5	□□□□□ -0.41
RFX3-210	ENST00000457373	CEP85	Q6P2H3	762 aa		12.5	□□□□□ -0.41
RFX3-210	ENST00000457373	RSBN1L	Q6PCB5	846 aa	Predicted RBP	12.5	□□□□□ -0.41
RFX3-210	ENST00000457373	RBM46	Q8TBY0	533 aa	Known RBP	12.5	□□□□□ -0.41
RFX3-210	ENST00000457373	KCNV2	Q8TDN2	545 aa		12.5	□□□□□ -0.41
RFX3-210	ENST00000457373	SSH3	Q8TE77	659 aa		12.5	□□□□□ -0.41
RFX3-210	ENST00000457373	FAM84B	Q96KN1	310 aa	Predicted RBP	12.5	□□□□□ -0.41
RFX3-210	ENST00000457373	MXD3	Q9BW11	206 aa		12.5	□□□□□ -0.41
RFX3-210	ENST00000457373		H7C1D1	291 aa		12.49	□□□□□ -0.41
RFX3-210	ENST00000457373	SURF6	O75683	361 aa	Known RBP	12.49	□□□□□ -0.41
RFX3-210	ENST00000457373	FGFR2	P21802	821 aa		12.49	□□□□□ -0.41
RFX3-210	ENST00000457373	TFCP2	Q12800	502 aa		12.49	□□□□□ -0.41
RFX3-210	ENST00000457373	OS9	Q13438	667 aa	Predicted RBP	12.49	□□□□□ -0.41
RFX3-210	ENST00000457373	ATP2B3	Q16720	1220 aa		12.49	□□□□□ -0.41
RFX3-210	ENST00000457373	CAVIN4	Q5BKX8	364 aa		12.49	□□□□□ -0.41
RFX3-210	ENST00000457373	RBM26	Q5T8P6	1007 aa	Known RBP	12.49	□□□□□ -0.41
RFX3-210	ENST00000457373	PNMA8A	Q86V59	439 aa	Predicted RBP	12.49	□□□□□ -0.41
RFX3-210	ENST00000457373	VPS37D	Q86XT2	251 aa		12.49	□□□□□ -0.41
RFX3-210	ENST00000457373	MICALL2	Q8IY33	904 aa		12.49	□□□□□ -0.41
RFX3-210	ENST00000457373	SMC1B	Q8NDV3	1235 aa		12.49	□□□□□ -0.41
RFX3-210	ENST00000457373	LPIN2	Q92539	896 aa		12.49	□□□□□ -0.41
RFX3-210	ENST00000457373	DPF2	Q92785	391 aa		12.49	□□□□□ -0.41
RFX3-210	ENST00000457373	ZBTB40	Q9NUA8	1239 aa		12.49	□□□□□ -0.41
RFX3-210	ENST00000457373	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	12.49	□□□□□ -0.41
RFX3-210	ENST00000457373	JAG2	Q9Y219	1238 aa		12.49	□□□□□ -0.41
RFX3-210	ENST00000457373	FRAT2	O75474	233 aa	Predicted RBP	12.48	□□□□□ -0.41
RFX3-210	ENST00000457373	IL1R1	P14778	569 aa		12.48	□□□□□ -0.41
RFX3-210	ENST00000457373	RPS12	P25398	132 aa	Known RBP	12.48	□□□□□ -0.41
RFX3-210	ENST00000457373	BCAM	P50895	628 aa		12.48	□□□□□ -0.41
RFX3-210	ENST00000457373	DACT2	Q5SW24	774 aa		12.48	□□□□□ -0.41
RFX3-210	ENST00000457373	STRIP1	Q5VSL9	837 aa		12.48	□□□□□ -0.41
RFX3-210	ENST00000457373	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.48	□□□□□ -0.41
RFX3-210	ENST00000457373	AGBL3	Q8NEM8	1001 aa		12.48	□□□□□ -0.41
RFX3-210	ENST00000457373	ADARB2	Q9NS39	739 aa	Known RBP	12.48	□□□□□ -0.41
RFX3-210	ENST00000457373	ZNF646	O15015	1829 aa	Predicted RBP	12.48	□□□□□ -0.41
RFX3-210	ENST00000457373	SASH1	O94885	1247 aa		12.47	□□□□□ -0.41
RFX3-210	ENST00000457373	TIMM10	P62072	90 aa		12.47	□□□□□ -0.41
RFX3-210	ENST00000457373	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12.47	□□□□□ -0.41
RFX3-210	ENST00000457373	CHADL	Q6NUI6	762 aa		12.47	□□□□□ -0.41
RFX3-210	ENST00000457373	USP50	Q70EL3	339 aa	Predicted RBP	12.47	□□□□□ -0.41
RFX3-210	ENST00000457373	SAMD7	Q7Z3H4	446 aa		12.47	□□□□□ -0.41
RFX3-210	ENST00000457373	FBXO33	Q7Z6M2	555 aa		12.47	□□□□□ -0.41
RFX3-210	ENST00000457373	LDHD	Q86WU2	507 aa		12.47	□□□□□ -0.41
RFX3-210	ENST00000457373	TDRD7	Q8NHU6	1098 aa	Known RBP	12.47	□□□□□ -0.41
RFX3-210	ENST00000457373	NEUROD6	Q96NK8	337 aa		12.47	□□□□□ -0.41
RFX3-210	ENST00000457373	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	12.47	□□□□□ -0.41
RFX3-210	ENST00000457373	FSTL1	Q12841	308 aa		12.46	□□□□□ -0.41
RFX3-210	ENST00000457373	CHAF1A	Q13111	956 aa	Predicted RBP	12.46	□□□□□ -0.41
RFX3-210	ENST00000457373	TRPM4	Q8TD43	1214 aa		12.46	□□□□□ -0.41
RFX3-210	ENST00000457373	CRBN	Q96SW2	442 aa		12.46	□□□□□ -0.41
RFX3-210	ENST00000457373	GML	Q99445	158 aa		12.46	□□□□□ -0.41
RFX3-210	ENST00000457373	AKAP2	Q9Y2D5	859 aa		12.46	□□□□□ -0.41
RFX3-210	ENST00000457373	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.46	□□□□□ -0.41
RFX3-210	ENST00000457373	MYH13	Q9UKX3	1938 aa		12.46	□□□□□ -0.42
RFX3-210	ENST00000457373	MYO3B	Q8WXR4	1341 aa		12.45	□□□□□ -0.42
RFX3-210	ENST00000457373		A0A1B0GUL7	405 aa		12.45	□□□□□ -0.42
RFX3-210	ENST00000457373		F8W031	263 aa	Predicted RBP	12.45	□□□□□ -0.42
RFX3-210	ENST00000457373	USP17L8	P0C7I0	530 aa		12.45	□□□□□ -0.42
RFX3-210	ENST00000457373	ADORA1	P30542	326 aa		12.45	□□□□□ -0.42
RFX3-210	ENST00000457373	HIRA	P54198	1017 aa	Predicted RBP	12.45	□□□□□ -0.42
RFX3-210	ENST00000457373	MAP1S	Q66K74	1059 aa	Predicted RBP	12.45	□□□□□ -0.42
RFX3-210	ENST00000457373	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.45	□□□□□ -0.42
RFX3-210	ENST00000457373	KIAA0825	Q8IV33	1275 aa		12.45	□□□□□ -0.42
RFX3-210	ENST00000457373	EXOC6B	Q9Y2D4	811 aa		12.45	□□□□□ -0.42
RFX3-210	ENST00000457373	NOP58	Q9Y2X3	529 aa	Known RBP	12.45	□□□□□ -0.42
RFX3-210	ENST00000457373	ADAMTSL1	Q8N6G6	1762 aa		12.45	□□□□□ -0.42
RFX3-210	ENST00000457373	FAM205A	Q6ZU69	1335 aa		12.44	□□□□□ -0.42
RFX3-210	ENST00000457373	POLR2A	P24928	1970 aa	Known RBP	12.44	□□□□□ -0.42
RFX3-210	ENST00000457373	HMMR	O75330	724 aa		12.44	□□□□□ -0.42
RFX3-210	ENST00000457373	EGFR	P00533	1210 aa		12.44	□□□□□ -0.42
RFX3-210	ENST00000457373	KIF4B	Q2VIQ3	1234 aa		12.44	□□□□□ -0.42
RFX3-210	ENST00000457373	SIRT2	Q8IXJ6	389 aa		12.44	□□□□□ -0.42
RFX3-210	ENST00000457373	OGFOD1	Q8N543	542 aa		12.44	□□□□□ -0.42
RFX3-210	ENST00000457373	CERS5	Q8N5B7	392 aa		12.44	□□□□□ -0.42
RFX3-210	ENST00000457373	XAGE2	Q96GT9	111 aa		12.44	□□□□□ -0.42
RFX3-210	ENST00000457373	BCL11A	Q9H165	835 aa		12.44	□□□□□ -0.42
RFX3-210	ENST00000457373	HDAC9	Q9UKV0	1011 aa		12.44	□□□□□ -0.42
RFX3-210	ENST00000457373	ARAP2	Q8WZ64	1704 aa		12.43	□□□□□ -0.42
RFX3-210	ENST00000457373	APBB1	O00213	710 aa		12.43	□□□□□ -0.42
RFX3-210	ENST00000457373	PHKA1	P46020	1223 aa		12.43	□□□□□ -0.42
RFX3-210	ENST00000457373	ZNF280A	P59817	542 aa	Predicted RBP	12.43	□□□□□ -0.42
RFX3-210	ENST00000457373	MFSD14B	Q5SR56	506 aa		12.43	□□□□□ -0.42
RFX3-210	ENST00000457373	GORAB	Q5T7V8	394 aa		12.43	□□□□□ -0.42
RFX3-210	ENST00000457373	CCDC102B	Q68D86	513 aa		12.43	□□□□□ -0.42
RFX3-210	ENST00000457373	CNTROB	Q8N137	903 aa		12.43	□□□□□ -0.42
RFX3-210	ENST00000457373	MYOZ2	Q9NPC6	264 aa		12.43	□□□□□ -0.42

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