RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 CGNQ9P2M7 1197 aaKnown RBP20.64■□□□□ 0.89
PTPN6-204ENST00000456013 A0A1B0GUL7 405 aa20.64■□□□□ 0.89
PTPN6-204ENST00000456013 PPFIA3O75145 1194 aa20.64■□□□□ 0.89
PTPN6-204ENST00000456013 FILIP1Q7Z7B0 1213 aa20.64■□□□□ 0.89
PTPN6-204ENST00000456013 LINC00301Q8NCQ3 95 aa20.64■□□□□ 0.89
PTPN6-204ENST00000456013 DDX60Q8IY21 1712 aaKnown RBP20.63■□□□□ 0.89
PTPN6-204ENST00000456013 GSDMDP57764 484 aa20.63■□□□□ 0.89
PTPN6-204ENST00000456013 TTLL5Q6EMB2 1281 aa20.63■□□□□ 0.89
PTPN6-204ENST00000456013 SDF4Q9BRK5 362 aa20.63■□□□□ 0.89
PTPN6-204ENST00000456013 ZNF592Q92610 1267 aa20.63■□□□□ 0.89
PTPN6-204ENST00000456013 OSBP2Q969R2 916 aa20.63■□□□□ 0.89
PTPN6-204ENST00000456013 BPIFA3Q9BQP9 254 aa20.63■□□□□ 0.89
PTPN6-204ENST00000456013 OGFRQ9NZT2 677 aa20.63■□□□□ 0.89
PTPN6-204ENST00000456013 CTNNA3Q9UI47 895 aa20.63■□□□□ 0.89
PTPN6-204ENST00000456013 A0A1B0GVL5 298 aa20.62■□□□□ 0.89
PTPN6-204ENST00000456013 YEATS4O95619 227 aa20.62■□□□□ 0.89
PTPN6-204ENST00000456013 TTLL7Q6ZT98 887 aa20.62■□□□□ 0.89
PTPN6-204ENST00000456013 KCNG4Q8TDN1 519 aa20.62■□□□□ 0.89
PTPN6-204ENST00000456013 ERCC4Q92889 916 aaPredicted RBP20.62■□□□□ 0.89
PTPN6-204ENST00000456013 OSBPL5Q9H0X9 879 aaPredicted RBP20.62■□□□□ 0.89
PTPN6-204ENST00000456013 IMPACTQ9P2X3 320 aa20.62■□□□□ 0.89
PTPN6-204ENST00000456013 NDUFA8P51970 172 aa20.61■□□□□ 0.89
PTPN6-204ENST00000456013 LRRFIP1Q32MZ4 808 aaKnown RBP20.61■□□□□ 0.89
PTPN6-204ENST00000456013 PROSER2Q86WR7 435 aaPredicted RBP20.61■□□□□ 0.89
PTPN6-204ENST00000456013 CCAR2Q8N163 923 aaKnown RBP20.61■□□□□ 0.89
PTPN6-204ENST00000456013 CCDC191Q8NCU4 936 aa20.61■□□□□ 0.89
PTPN6-204ENST00000456013 ZNF594Q96JF6 807 aaPredicted RBP20.61■□□□□ 0.89
PTPN6-204ENST00000456013 POLR3EQ9NVU0 708 aa20.61■□□□□ 0.89
PTPN6-204ENST00000456013 KIAA1468Q9P260 1216 aa20.61■□□□□ 0.89
PTPN6-204ENST00000456013 UBR2Q8IWV8 1755 aa20.61■□□□□ 0.89
PTPN6-204ENST00000456013 STK38Q15208 465 aa20.61■□□□□ 0.89
PTPN6-204ENST00000456013 NBPF11Q86T75 865 aa20.61■□□□□ 0.89
PTPN6-204ENST00000456013 NAA30Q147X3 362 aaPredicted RBP20.6■□□□□ 0.89
PTPN6-204ENST00000456013 C8orf76Q96K31 380 aa20.6■□□□□ 0.89
PTPN6-204ENST00000456013 CLIC4Q9Y696 253 aa20.6■□□□□ 0.89
PTPN6-204ENST00000456013 DHX16O60231 1041 aaKnown RBP20.6■□□□□ 0.89
PTPN6-204ENST00000456013 SF3A1Q15459 793 aaKnown RBP20.6■□□□□ 0.89
PTPN6-204ENST00000456013 IMMTQ16891 758 aaKnown RBP20.6■□□□□ 0.89
PTPN6-204ENST00000456013 BRAPQ7Z569 592 aa20.6■□□□□ 0.89
PTPN6-204ENST00000456013 C19orf44Q9H6X5 657 aa20.6■□□□□ 0.89
PTPN6-204ENST00000456013 GPHNQ9NQX3 736 aaPredicted RBP20.6■□□□□ 0.89
PTPN6-204ENST00000456013 FOXP2O15409 715 aa20.59■□□□□ 0.89
PTPN6-204ENST00000456013 FBXO18Q8NFZ0 1043 aa20.59■□□□□ 0.89
PTPN6-204ENST00000456013 NEDD4P46934 1319 aa20.59■□□□□ 0.89
PTPN6-204ENST00000456013 ZFYP08048 801 aaPredicted RBP20.59■□□□□ 0.89
PTPN6-204ENST00000456013 OTUD7BQ6GQQ9 843 aa20.59■□□□□ 0.89
PTPN6-204ENST00000456013 PUS3Q9BZE2 481 aaKnown RBP20.59■□□□□ 0.89
PTPN6-204ENST00000456013 MYH7P12883 1935 aa20.59■□□□□ 0.89
PTPN6-204ENST00000456013 KIF2AO00139 706 aaPredicted RBP20.58■□□□□ 0.89
PTPN6-204ENST00000456013 SPTLC2O15270 562 aa20.58■□□□□ 0.89
PTPN6-204ENST00000456013 MYSM1Q5VVJ2 828 aa20.58■□□□□ 0.89
PTPN6-204ENST00000456013 MB21D2Q8IYB1 491 aaPredicted RBP20.58■□□□□ 0.89
PTPN6-204ENST00000456013 CEP126Q9P2H0 1117 aa20.58■□□□□ 0.89
PTPN6-204ENST00000456013 FKBP4Q02790 459 aaKnown RBP eCLIP20.58■□□□□ 0.88
PTPN6-204ENST00000456013 ZRSR1Q15695 479 aaKnown RBP20.58■□□□□ 0.88
PTPN6-204ENST00000456013 DPCR1Q3MIW9 517 aa20.58■□□□□ 0.88
PTPN6-204ENST00000456013 CCDC158Q5M9N0 1113 aa20.58■□□□□ 0.88
PTPN6-204ENST00000456013 FBXW7Q969H0 707 aa20.58■□□□□ 0.88
PTPN6-204ENST00000456013 ORC3Q9UBD5 711 aaPredicted RBP20.58■□□□□ 0.88
PTPN6-204ENST00000456013 HPS5Q9UPZ3 1129 aa20.58■□□□□ 0.88
PTPN6-204ENST00000456013 C4AP0C0L4 1744 aa20.57■□□□□ 0.88
PTPN6-204ENST00000456013 C4BP0C0L5 1744 aa20.57■□□□□ 0.88
PTPN6-204ENST00000456013 KLF18A0A0U1RQI7 1052 aa20.57■□□□□ 0.88
PTPN6-204ENST00000456013 PRC1O43663 620 aa20.57■□□□□ 0.88
PTPN6-204ENST00000456013 POLR3DP05423 398 aaPredicted RBP20.57■□□□□ 0.88
PTPN6-204ENST00000456013 TRMT1Q9NXH9 659 aaKnown RBP20.57■□□□□ 0.88
PTPN6-204ENST00000456013 DDX41Q9UJV9 622 aaKnown RBP20.57■□□□□ 0.88
PTPN6-204ENST00000456013 FGAP02671 866 aa20.57■□□□□ 0.88
PTPN6-204ENST00000456013 HAND2P61296 217 aa20.57■□□□□ 0.88
PTPN6-204ENST00000456013 RGS22Q8NE09 1264 aa20.57■□□□□ 0.88
PTPN6-204ENST00000456013 KIF18AQ8NI77 898 aa20.57■□□□□ 0.88
PTPN6-204ENST00000456013 NLRP12P59046 1061 aa20.56■□□□□ 0.88
PTPN6-204ENST00000456013 CHRNA2Q15822 529 aa20.56■□□□□ 0.88
PTPN6-204ENST00000456013 TTC39AQ5SRH9 613 aa20.56■□□□□ 0.88
PTPN6-204ENST00000456013 FBXO3Q9UK99 471 aa20.56■□□□□ 0.88
PTPN6-204ENST00000456013 ZNF215Q9UL58 517 aaPredicted RBP20.56■□□□□ 0.88
PTPN6-204ENST00000456013 GOLGA8BA8MQT2 603 aa20.56■□□□□ 0.88
PTPN6-204ENST00000456013 SLC3A2P08195 630 aaKnown RBP20.56■□□□□ 0.88
PTPN6-204ENST00000456013 WASHC4Q2M389 1173 aa20.56■□□□□ 0.88
PTPN6-204ENST00000456013 CCDC150Q8NCX0 1101 aa20.56■□□□□ 0.88
PTPN6-204ENST00000456013 NCOA7Q8NI08 942 aa20.56■□□□□ 0.88
PTPN6-204ENST00000456013 ERO1AQ96HE7 468 aa20.56■□□□□ 0.88
PTPN6-204ENST00000456013 XPO4Q9C0E2 1151 aaKnown RBP20.56■□□□□ 0.88
PTPN6-204ENST00000456013 ZBTB3Q9H5J0 574 aa20.56■□□□□ 0.88
PTPN6-204ENST00000456013 ZHX1Q9UKY1 873 aaPredicted RBP20.56■□□□□ 0.88
PTPN6-204ENST00000456013 AKAP2Q9Y2D5 859 aa20.56■□□□□ 0.88
PTPN6-204ENST00000456013 WDR19Q8NEZ3 1342 aa20.55■□□□□ 0.88
PTPN6-204ENST00000456013 ZNF202O95125 648 aa20.55■□□□□ 0.88
PTPN6-204ENST00000456013 A1BGP04217 495 aa20.55■□□□□ 0.88
PTPN6-204ENST00000456013 DHX8Q14562 1220 aaKnown RBP20.55■□□□□ 0.88
PTPN6-204ENST00000456013 SYNE3Q6ZMZ3 975 aa20.55■□□□□ 0.88
PTPN6-204ENST00000456013 ANTXR2P58335 489 aa20.54■□□□□ 0.88
PTPN6-204ENST00000456013 APPBP2Q92624 585 aa20.54■□□□□ 0.88
PTPN6-204ENST00000456013 XAGE2Q96GT9 111 aa20.54■□□□□ 0.88
PTPN6-204ENST00000456013 CPLX1O14810 134 aa20.54■□□□□ 0.88
PTPN6-204ENST00000456013 KIF20AO95235 890 aa20.54■□□□□ 0.88
PTPN6-204ENST00000456013 CMA1P23946 247 aa20.54■□□□□ 0.88
PTPN6-204ENST00000456013 KCNJ6P48051 423 aa20.54■□□□□ 0.88
PTPN6-204ENST00000456013 TPM4P67936 248 aa20.54■□□□□ 0.88
PTPN6-204ENST00000456013 AXDND1Q5T1B0 1012 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms