RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 SH3TC1Q8TE82 1336 aa15.86■□□□□ 0.13
PTPRE-204ENST00000455661 RNMTO43148 476 aaKnown RBP15.86■□□□□ 0.13
PTPRE-204ENST00000455661 SEC31AO94979 1220 aaKnown RBP15.86■□□□□ 0.13
PTPRE-204ENST00000455661 OAS2P29728 719 aaKnown RBP15.86■□□□□ 0.13
PTPRE-204ENST00000455661 PDE4CQ08493 712 aa15.86■□□□□ 0.13
PTPRE-204ENST00000455661 SYNE3Q6ZMZ3 975 aa15.86■□□□□ 0.13
PTPRE-204ENST00000455661 DSCC1Q9BVC3 393 aa15.86■□□□□ 0.13
PTPRE-204ENST00000455661 COPRSQ9NQ92 184 aa15.86■□□□□ 0.13
PTPRE-204ENST00000455661 DDX21Q9NR30 783 aaKnown RBP eCLIP15.86■□□□□ 0.13
PTPRE-204ENST00000455661 RGPD8O14715 1765 aaPredicted RBP15.86■□□□□ 0.13
PTPRE-204ENST00000455661 GOLGA6L9A6NEM1 432 aa15.85■□□□□ 0.13
PTPRE-204ENST00000455661 CASQ1P31415 396 aa15.85■□□□□ 0.13
PTPRE-204ENST00000455661 TFCP2Q12800 502 aa15.85■□□□□ 0.13
PTPRE-204ENST00000455661 SMC1AQ14683 1233 aaKnown RBP15.85■□□□□ 0.13
PTPRE-204ENST00000455661 KRBA2Q6ZNG9 492 aa15.85■□□□□ 0.13
PTPRE-204ENST00000455661 REXO1L1PQ8IX06 675 aa15.85■□□□□ 0.13
PTPRE-204ENST00000455661 UBXN6Q9BZV1 441 aa15.85■□□□□ 0.13
PTPRE-204ENST00000455661 TMX1Q9H3N1 280 aa15.85■□□□□ 0.13
PTPRE-204ENST00000455661 HELLSQ9NRZ9 838 aa15.85■□□□□ 0.13
PTPRE-204ENST00000455661 PARP3Q9Y6F1 533 aa15.85■□□□□ 0.13
PTPRE-204ENST00000455661 NDUFB9Q9Y6M9 179 aa15.85■□□□□ 0.13
PTPRE-204ENST00000455661 UBR1Q8IWV7 1749 aa15.85■□□□□ 0.13
PTPRE-204ENST00000455661 TSPOAP1O95153 1857 aa15.85■□□□□ 0.13
PTPRE-204ENST00000455661 PPFIA3O75145 1194 aa15.85■□□□□ 0.13
PTPRE-204ENST00000455661 TOP1P11387 765 aaKnown RBP15.85■□□□□ 0.13
PTPRE-204ENST00000455661 LTKP29376 864 aa15.85■□□□□ 0.13
PTPRE-204ENST00000455661 GNL2Q13823 731 aaKnown RBP15.85■□□□□ 0.13
PTPRE-204ENST00000455661 CFAP100Q494V2 611 aa15.85■□□□□ 0.13
PTPRE-204ENST00000455661 AMOTQ4VCS5 1084 aa15.85■□□□□ 0.13
PTPRE-204ENST00000455661 CC2D1AQ6P1N0 951 aaPredicted RBP15.85■□□□□ 0.13
PTPRE-204ENST00000455661 DDX46Q7L014 1031 aaKnown RBP15.85■□□□□ 0.13
PTPRE-204ENST00000455661 BRAPQ7Z569 592 aa15.85■□□□□ 0.13
PTPRE-204ENST00000455661 ANKARQ7Z5J8 1434 aa15.85■□□□□ 0.13
PTPRE-204ENST00000455661 C8orf76Q96K31 380 aa15.85■□□□□ 0.13
PTPRE-204ENST00000455661 AK7Q96M32 723 aa15.85■□□□□ 0.13
PTPRE-204ENST00000455661 ARFGAP3Q9NP61 516 aa15.85■□□□□ 0.13
PTPRE-204ENST00000455661 CWC15Q9P013 229 aaKnown RBP15.85■□□□□ 0.13
PTPRE-204ENST00000455661 FEZ2Q9UHY8 353 aaPredicted RBP15.85■□□□□ 0.13
PTPRE-204ENST00000455661 E7EWF7 191 aa15.84■□□□□ 0.13
PTPRE-204ENST00000455661 TBC1D8O95759 1140 aa15.84■□□□□ 0.13
PTPRE-204ENST00000455661 POLR3DP05423 398 aaPredicted RBP15.84■□□□□ 0.13
PTPRE-204ENST00000455661 IGKV5-2P06315 115 aa15.84■□□□□ 0.13
PTPRE-204ENST00000455661 KBTBD3Q8NAB2 608 aa15.84■□□□□ 0.13
PTPRE-204ENST00000455661 SMARCE1Q969G3 411 aa15.84■□□□□ 0.13
PTPRE-204ENST00000455661 ARHGAP6O43182 974 aa15.84■□□□□ 0.13
PTPRE-204ENST00000455661 CHGBP05060 677 aa15.84■□□□□ 0.13
PTPRE-204ENST00000455661 CMA1P23946 247 aa15.84■□□□□ 0.13
PTPRE-204ENST00000455661 TRIM34Q9BYJ4 488 aa15.84■□□□□ 0.13
PTPRE-204ENST00000455661 LAMA4Q16363 1823 aa15.83■□□□□ 0.13
PTPRE-204ENST00000455661 LMO7Q8WWI1 1683 aa15.83■□□□□ 0.13
PTPRE-204ENST00000455661 NEURL1BA8MQ27 555 aa15.83■□□□□ 0.12
PTPRE-204ENST00000455661 MYO1BO43795 1136 aa15.83■□□□□ 0.12
PTPRE-204ENST00000455661 DHX16O60231 1041 aaKnown RBP15.83■□□□□ 0.12
PTPRE-204ENST00000455661 ATP1A3P13637 1013 aa15.83■□□□□ 0.12
PTPRE-204ENST00000455661 FDPSP14324 419 aaKnown RBP15.83■□□□□ 0.12
PTPRE-204ENST00000455661 ST5P78524 1137 aa15.83■□□□□ 0.12
PTPRE-204ENST00000455661 MYL5Q02045 173 aa15.83■□□□□ 0.12
PTPRE-204ENST00000455661 GCKRQ14397 625 aa15.83■□□□□ 0.12
PTPRE-204ENST00000455661 DBNDD2Q9BQY9 259 aa15.83■□□□□ 0.12
PTPRE-204ENST00000455661 NEDD4P46934 1319 aa15.83■□□□□ 0.12
PTPRE-204ENST00000455661 HEG1Q9ULI3 1381 aa15.83■□□□□ 0.12
PTPRE-204ENST00000455661 PRAMEF22A3QJZ6 481 aa15.83■□□□□ 0.12
PTPRE-204ENST00000455661 PFKFB1P16118 471 aa15.83■□□□□ 0.12
PTPRE-204ENST00000455661 FAM69CQ0P6D2 419 aa15.83■□□□□ 0.12
PTPRE-204ENST00000455661 MYSM1Q5VVJ2 828 aa15.83■□□□□ 0.12
PTPRE-204ENST00000455661 VSTM4Q8IW00 320 aa15.83■□□□□ 0.12
PTPRE-204ENST00000455661 FAM177A1Q8N128 213 aaPredicted RBP15.83■□□□□ 0.12
PTPRE-204ENST00000455661 PPP2R2CQ9Y2T4 447 aa15.83■□□□□ 0.12
PTPRE-204ENST00000455661 EID1Q9Y6B2 187 aa15.83■□□□□ 0.12
PTPRE-204ENST00000455661 MAP3K9P80192 1104 aa15.82■□□□□ 0.12
PTPRE-204ENST00000455661 PPP2R3AQ06190 1150 aa15.82■□□□□ 0.12
PTPRE-204ENST00000455661 EPHA10Q5JZY3 1008 aa15.82■□□□□ 0.12
PTPRE-204ENST00000455661 JAKMIP3Q5VZ66 844 aa15.82■□□□□ 0.12
PTPRE-204ENST00000455661 ISM2Q6H9L7 571 aa15.82■□□□□ 0.12
PTPRE-204ENST00000455661 OLFM4Q6UX06 510 aa15.82■□□□□ 0.12
PTPRE-204ENST00000455661 MARF1Q9Y4F3 1742 aaKnown RBP15.82■□□□□ 0.12
PTPRE-204ENST00000455661 VWA3AA6NCI4 1184 aa15.82■□□□□ 0.12
PTPRE-204ENST00000455661 SASH3O75995 380 aa15.82■□□□□ 0.12
PTPRE-204ENST00000455661 GNG11P61952 73 aa15.82■□□□□ 0.12
PTPRE-204ENST00000455661 ZSCAN26Q16670 478 aa15.82■□□□□ 0.12
PTPRE-204ENST00000455661 ANO1Q5XXA6 986 aa15.82■□□□□ 0.12
PTPRE-204ENST00000455661 CCDC34Q96HJ3 373 aa15.82■□□□□ 0.12
PTPRE-204ENST00000455661 ZCCHC17Q9NP64 241 aaKnown RBP15.82■□□□□ 0.12
PTPRE-204ENST00000455661 USP54Q70EL1 1684 aa15.81■□□□□ 0.12
PTPRE-204ENST00000455661 PTPN12Q05209 780 aaKnown RBP15.81■□□□□ 0.12
PTPRE-204ENST00000455661 OTUD7BQ6GQQ9 843 aa15.81■□□□□ 0.12
PTPRE-204ENST00000455661 CHST3Q7LGC8 479 aa15.81■□□□□ 0.12
PTPRE-204ENST00000455661 TICAM2Q86XR7 235 aa15.81■□□□□ 0.12
PTPRE-204ENST00000455661 FBXO18Q8NFZ0 1043 aa15.81■□□□□ 0.12
PTPRE-204ENST00000455661 RABGGTAQ92696 567 aa15.81■□□□□ 0.12
PTPRE-204ENST00000455661 DPF2Q92785 391 aa15.81■□□□□ 0.12
PTPRE-204ENST00000455661 MYD88Q99836 296 aa15.81■□□□□ 0.12
PTPRE-204ENST00000455661 SYKP43405 635 aa15.8■□□□□ 0.12
PTPRE-204ENST00000455661 TNNT3P45378 269 aaPredicted RBP15.8■□□□□ 0.12
PTPRE-204ENST00000455661 GOLGA1Q92805 767 aa15.8■□□□□ 0.12
PTPRE-204ENST00000455661 HSD3B7Q9H2F3 369 aa15.8■□□□□ 0.12
PTPRE-204ENST00000455661 TUBE1Q9UJT0 475 aa15.8■□□□□ 0.12
PTPRE-204ENST00000455661 PALLDQ8WX93 1383 aa15.8■□□□□ 0.12
PTPRE-204ENST00000455661 OVOS2A0A0G2JMS6 1433 aa15.8■□□□□ 0.12
PTPRE-204ENST00000455661 FANCGO15287 622 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms