RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 TRAF5O00463 557 aa22.01■■□□□ 1.11
COPS7A-202ENST00000455113 MTX1Q13505 466 aa22.01■■□□□ 1.11
COPS7A-202ENST00000455113 SCARF1Q14162 830 aa22.01■■□□□ 1.11
COPS7A-202ENST00000455113 LPIN2Q92539 896 aa22.01■■□□□ 1.11
COPS7A-202ENST00000455113 GGA3Q9NZ52 723 aa22.01■■□□□ 1.11
COPS7A-202ENST00000455113 FKBP1AP62942 108 aaKnown RBP22■■□□□ 1.11
COPS7A-202ENST00000455113 USP48Q86UV5 1035 aa22■■□□□ 1.11
COPS7A-202ENST00000455113 TDRD7Q8NHU6 1098 aaKnown RBP22■■□□□ 1.11
COPS7A-202ENST00000455113 ZNF408Q9H9D4 720 aa22■■□□□ 1.11
COPS7A-202ENST00000455113 MKRN1Q9UHC7 482 aaKnown RBP22■■□□□ 1.11
COPS7A-202ENST00000455113 CELF2O95319 508 aaKnown RBP22■■□□□ 1.11
COPS7A-202ENST00000455113 ATG9AQ7Z3C6 839 aa22■■□□□ 1.11
COPS7A-202ENST00000455113 PA2G4Q9UQ80 394 aaKnown RBP22■■□□□ 1.11
COPS7A-202ENST00000455113 ANGEL2Q5VTE6 544 aaKnown RBP21.99■■□□□ 1.11
COPS7A-202ENST00000455113 CRBNQ96SW2 442 aa21.99■■□□□ 1.11
COPS7A-202ENST00000455113 JAG2Q9Y219 1238 aa21.99■■□□□ 1.11
COPS7A-202ENST00000455113 COG6Q9Y2V7 657 aa21.99■■□□□ 1.11
COPS7A-202ENST00000455113 POLR2AP24928 1970 aaKnown RBP21.99■■□□□ 1.11
COPS7A-202ENST00000455113 FBXO33Q7Z6M2 555 aa21.98■■□□□ 1.11
COPS7A-202ENST00000455113 ZNF646O15015 1829 aaPredicted RBP21.98■■□□□ 1.11
COPS7A-202ENST00000455113 F8W031 263 aaPredicted RBP21.97■■□□□ 1.11
COPS7A-202ENST00000455113 FGFR2P21802 821 aa21.97■■□□□ 1.11
COPS7A-202ENST00000455113 FMR1Q06787 632 aaKnown RBP eCLIP21.97■■□□□ 1.11
COPS7A-202ENST00000455113 ATP2B3Q16720 1220 aa21.97■■□□□ 1.11
COPS7A-202ENST00000455113 DEFB115Q30KQ5 88 aa21.97■■□□□ 1.11
COPS7A-202ENST00000455113 MFSD14BQ5SR56 506 aa21.97■■□□□ 1.11
COPS7A-202ENST00000455113 FAM205AQ6ZU69 1335 aa21.97■■□□□ 1.11
COPS7A-202ENST00000455113 PITPNM2Q9BZ72 1349 aa21.96■■□□□ 1.11
COPS7A-202ENST00000455113 WNT10BO00744 389 aa21.96■■□□□ 1.11
COPS7A-202ENST00000455113 BCAMP50895 628 aa21.96■■□□□ 1.11
COPS7A-202ENST00000455113 G3BP1Q13283 466 aaKnown RBP eCLIP21.96■■□□□ 1.11
COPS7A-202ENST00000455113 MVPQ14764 893 aaKnown RBP21.96■■□□□ 1.11
COPS7A-202ENST00000455113 DLGAP5Q15398 846 aa21.96■■□□□ 1.11
COPS7A-202ENST00000455113 PAXIP1Q6ZW49 1069 aaPredicted RBP21.96■■□□□ 1.11
COPS7A-202ENST00000455113 EXOC6Q8TAG9 804 aa21.96■■□□□ 1.11
COPS7A-202ENST00000455113 TBC1D22AQ8WUA7 517 aa21.96■■□□□ 1.11
COPS7A-202ENST00000455113 GNL3LQ9NVN8 582 aaKnown RBP21.96■■□□□ 1.11
COPS7A-202ENST00000455113 IQSEC3Q9UPP2 1182 aaPredicted RBP21.96■■□□□ 1.11
COPS7A-202ENST00000455113 AKAP2Q9Y2D5 859 aa21.96■■□□□ 1.11
COPS7A-202ENST00000455113 CNTNAP1P78357 1384 aa21.96■■□□□ 1.11
COPS7A-202ENST00000455113 ZBTB7BO15156 539 aaPredicted RBP21.95■■□□□ 1.1
COPS7A-202ENST00000455113 MYO1BO43795 1136 aa21.95■■□□□ 1.1
COPS7A-202ENST00000455113 CHAF1AQ13111 956 aaPredicted RBP21.95■■□□□ 1.1
COPS7A-202ENST00000455113 NBPF9Q3BBW0 867 aa21.95■■□□□ 1.1
COPS7A-202ENST00000455113 CST9Q5W186 159 aa21.95■■□□□ 1.1
COPS7A-202ENST00000455113 CERS5Q8N5B7 392 aa21.95■■□□□ 1.1
COPS7A-202ENST00000455113 RBM5P52756 815 aaKnown RBP eCLIP21.94■■□□□ 1.1
COPS7A-202ENST00000455113 JMYQ8N9B5 988 aa21.94■■□□□ 1.1
COPS7A-202ENST00000455113 GTF3C3Q9Y5Q9 886 aa21.94■■□□□ 1.1
COPS7A-202ENST00000455113 PNMA6EA0A0J9YXQ4 647 aa21.94■■□□□ 1.1
COPS7A-202ENST00000455113 RASSF10A6NK89 507 aa21.94■■□□□ 1.1
COPS7A-202ENST00000455113 ADM5C9JUS6 153 aa21.94■■□□□ 1.1
COPS7A-202ENST00000455113 CHMP4BQ9H444 224 aaKnown RBP21.94■■□□□ 1.1
COPS7A-202ENST00000455113 ASTN2O75129 1339 aaPredicted RBP21.93■■□□□ 1.1
COPS7A-202ENST00000455113 TLL2Q9Y6L7 1015 aa21.93■■□□□ 1.1
COPS7A-202ENST00000455113 ATP8B2P98198 1209 aa21.92■■□□□ 1.1
COPS7A-202ENST00000455113 C2orf69Q8N8R5 385 aa21.92■■□□□ 1.1
COPS7A-202ENST00000455113 C1orf115Q9H7X2 142 aa21.92■■□□□ 1.1
COPS7A-202ENST00000455113 TTF2Q9UNY4 1162 aaKnown RBP21.92■■□□□ 1.1
COPS7A-202ENST00000455113 ECE1P42892 770 aa21.92■■□□□ 1.1
COPS7A-202ENST00000455113 OS9Q13438 667 aaPredicted RBP21.92■■□□□ 1.1
COPS7A-202ENST00000455113 DDX19BQ9UMR2 479 aa21.92■■□□□ 1.1
COPS7A-202ENST00000455113 CFAP100Q494V2 611 aa21.91■■□□□ 1.1
COPS7A-202ENST00000455113 APOBEC3FQ8IUX4 373 aaKnown RBP21.91■■□□□ 1.1
COPS7A-202ENST00000455113 MTMR14Q8NCE2 650 aa21.91■■□□□ 1.1
COPS7A-202ENST00000455113 MYH13Q9UKX3 1938 aa21.91■■□□□ 1.1
COPS7A-202ENST00000455113 TFCP2Q12800 502 aa21.9■■□□□ 1.1
COPS7A-202ENST00000455113 SAPCD2Q86UD0 394 aa21.9■■□□□ 1.1
COPS7A-202ENST00000455113 WDR66Q8TBY9 1149 aa21.9■■□□□ 1.1
COPS7A-202ENST00000455113 GBA2Q9HCG7 927 aaPredicted RBP21.9■■□□□ 1.1
COPS7A-202ENST00000455113 NF2P35240 595 aa21.89■■□□□ 1.1
COPS7A-202ENST00000455113 VEGFBP49765 207 aa21.89■■□□□ 1.1
COPS7A-202ENST00000455113 CDCA5Q96FF9 252 aa21.89■■□□□ 1.1
COPS7A-202ENST00000455113 SERPINA10Q9UK55 444 aa21.89■■□□□ 1.1
COPS7A-202ENST00000455113 A0A1B0GUL7 405 aa21.89■■□□□ 1.09
COPS7A-202ENST00000455113 GRM1Q13255 1194 aa21.89■■□□□ 1.09
COPS7A-202ENST00000455113 ERICH6BQ5W0A0 696 aa21.89■■□□□ 1.09
COPS7A-202ENST00000455113 SSH3Q8TE77 659 aa21.89■■□□□ 1.09
COPS7A-202ENST00000455113 NEUROD6Q96NK8 337 aa21.89■■□□□ 1.09
COPS7A-202ENST00000455113 SUGT1Q9Y2Z0 365 aa21.89■■□□□ 1.09
COPS7A-202ENST00000455113 ARAP2Q8WZ64 1704 aa21.89■■□□□ 1.09
COPS7A-202ENST00000455113 MAST3O60307 1309 aa21.88■■□□□ 1.09
COPS7A-202ENST00000455113 SURF6O75683 361 aaKnown RBP21.88■■□□□ 1.09
COPS7A-202ENST00000455113 TIMM10P62072 90 aa21.88■■□□□ 1.09
COPS7A-202ENST00000455113 POLA2Q14181 598 aa21.88■■□□□ 1.09
COPS7A-202ENST00000455113 GORABQ5T7V8 394 aa21.88■■□□□ 1.09
COPS7A-202ENST00000455113 DLK2Q6UY11 383 aa21.88■■□□□ 1.09
COPS7A-202ENST00000455113 HHIPL1Q96JK4 782 aa21.88■■□□□ 1.09
COPS7A-202ENST00000455113 DENND2AQ9ULE3 1009 aa21.88■■□□□ 1.09
COPS7A-202ENST00000455113 WDR33Q9C0J8 1336 aaKnown RBP21.88■■□□□ 1.09
COPS7A-202ENST00000455113 SPDYE2BA6NHP3 402 aa21.87■■□□□ 1.09
COPS7A-202ENST00000455113 SEMA3EO15041 775 aa21.87■■□□□ 1.09
COPS7A-202ENST00000455113 SPDYE6P0CI01 402 aa21.87■■□□□ 1.09
COPS7A-202ENST00000455113 HUNKP57058 714 aa21.87■■□□□ 1.09
COPS7A-202ENST00000455113 ZBED3Q96IU2 234 aaPredicted RBP21.87■■□□□ 1.09
COPS7A-202ENST00000455113 CCDC102BQ68D86 513 aa21.86■■□□□ 1.09
COPS7A-202ENST00000455113 CAPNS2Q96L46 248 aa21.86■■□□□ 1.09
COPS7A-202ENST00000455113 SCAF8Q9UPN6 1271 aaKnown RBP21.86■■□□□ 1.09
COPS7A-202ENST00000455113 ECM29Q5VYK3 1845 aa21.86■■□□□ 1.09
COPS7A-202ENST00000455113 XAGE2Q96GT9 111 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms