RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 SLC4A2P04920 1241 aa18.24■□□□□ 0.51
LYSMD3-202ENST00000453259 CASP7P55210 303 aa18.24■□□□□ 0.51
LYSMD3-202ENST00000453259 MKRN3Q13064 507 aaKnown RBP18.24■□□□□ 0.51
LYSMD3-202ENST00000453259 ZNF804AQ7Z570 1209 aa18.24■□□□□ 0.51
LYSMD3-202ENST00000453259 CACNA1FO60840 1977 aa18.23■□□□□ 0.51
LYSMD3-202ENST00000453259 RBBP6Q7Z6E9 1792 aaKnown RBP18.23■□□□□ 0.51
LYSMD3-202ENST00000453259 IL1R1P14778 569 aa18.23■□□□□ 0.51
LYSMD3-202ENST00000453259 IREB2P48200 963 aaKnown RBP18.23■□□□□ 0.51
LYSMD3-202ENST00000453259 FLIIQ13045 1269 aa18.23■□□□□ 0.51
LYSMD3-202ENST00000453259 TNFAIP1Q13829 316 aa18.23■□□□□ 0.51
LYSMD3-202ENST00000453259 WNK4Q96J92 1243 aa18.23■□□□□ 0.51
LYSMD3-202ENST00000453259 IRS2Q9Y4H2 1338 aa18.23■□□□□ 0.51
LYSMD3-202ENST00000453259 SPDYE2BA6NHP3 402 aa18.22■□□□□ 0.51
LYSMD3-202ENST00000453259 SPDYE6P0CI01 402 aa18.22■□□□□ 0.51
LYSMD3-202ENST00000453259 KLRK1P26718 216 aa18.22■□□□□ 0.51
LYSMD3-202ENST00000453259 PRKG1Q13976 671 aa18.22■□□□□ 0.51
LYSMD3-202ENST00000453259 OTOP1Q7RTM1 612 aa18.22■□□□□ 0.51
LYSMD3-202ENST00000453259 DNAAF4Q8WXU2 420 aa18.22■□□□□ 0.51
LYSMD3-202ENST00000453259 TRIM17Q9Y577 477 aa18.22■□□□□ 0.51
LYSMD3-202ENST00000453259 SSC5DA1L4H1 1573 aa18.21■□□□□ 0.51
LYSMD3-202ENST00000453259 IFIT5Q13325 482 aaKnown RBP18.21■□□□□ 0.51
LYSMD3-202ENST00000453259 ANKRD13AQ8IZ07 590 aa18.21■□□□□ 0.51
LYSMD3-202ENST00000453259 CERS5Q8N5B7 392 aa18.21■□□□□ 0.51
LYSMD3-202ENST00000453259 R3HDMLQ9H3Y0 253 aa18.21■□□□□ 0.51
LYSMD3-202ENST00000453259 TESPA1A2RU30 521 aaPredicted RBP18.2■□□□□ 0.5
LYSMD3-202ENST00000453259 FKBP5Q13451 457 aaPredicted RBP18.2■□□□□ 0.5
LYSMD3-202ENST00000453259 ARHGEF6Q15052 776 aa18.2■□□□□ 0.5
LYSMD3-202ENST00000453259 TSR2Q969E8 191 aaKnown RBP18.2■□□□□ 0.5
LYSMD3-202ENST00000453259 ARMC5Q96C12 935 aa18.2■□□□□ 0.5
LYSMD3-202ENST00000453259 IGF2BP3O00425 579 aaKnown RBP eCLIP18.19■□□□□ 0.5
LYSMD3-202ENST00000453259 CFAP100Q494V2 611 aa18.19■□□□□ 0.5
LYSMD3-202ENST00000453259 G2E3Q7L622 706 aa18.19■□□□□ 0.5
LYSMD3-202ENST00000453259 WWC1Q8IX03 1113 aa18.19■□□□□ 0.5
LYSMD3-202ENST00000453259 HTTP42858 3142 aa18.19■□□□□ 0.5
LYSMD3-202ENST00000453259 A0A1B0GUL6 1792 aa18.18■□□□□ 0.5
LYSMD3-202ENST00000453259 CLMNQ96JQ2 1002 aa18.18■□□□□ 0.5
LYSMD3-202ENST00000453259 SERPINA10Q9UK55 444 aa18.18■□□□□ 0.5
LYSMD3-202ENST00000453259 PTPN22Q9Y2R2 807 aa18.18■□□□□ 0.5
LYSMD3-202ENST00000453259 FAM205AQ6ZU69 1335 aa18.17■□□□□ 0.5
LYSMD3-202ENST00000453259 FOXO4P98177 505 aa18.16■□□□□ 0.5
LYSMD3-202ENST00000453259 SP3Q02447 781 aa18.16■□□□□ 0.5
LYSMD3-202ENST00000453259 CRHR2Q13324 411 aa18.16■□□□□ 0.5
LYSMD3-202ENST00000453259 RASA3Q14644 834 aa18.16■□□□□ 0.5
LYSMD3-202ENST00000453259 PRMT6Q96LA8 375 aaPredicted RBP18.16■□□□□ 0.5
LYSMD3-202ENST00000453259 EFCC1Q9HA90 598 aa18.16■□□□□ 0.5
LYSMD3-202ENST00000453259 VEZTQ9HBM0 779 aa18.16■□□□□ 0.5
LYSMD3-202ENST00000453259 CLRN2A0PK11 232 aa18.15■□□□□ 0.5
LYSMD3-202ENST00000453259 TAF5LO75529 589 aa18.15■□□□□ 0.5
LYSMD3-202ENST00000453259 USP2O75604 605 aaPredicted RBP18.15■□□□□ 0.5
LYSMD3-202ENST00000453259 CCDC57Q2TAC2 916 aa18.15■□□□□ 0.5
LYSMD3-202ENST00000453259 SPDYE2Q495Y8 402 aa18.15■□□□□ 0.5
LYSMD3-202ENST00000453259 NBPF12Q5TAG4 269 aaPredicted RBP18.15■□□□□ 0.5
LYSMD3-202ENST00000453259 WDHD1O75717 1129 aaPredicted RBP18.14■□□□□ 0.49
LYSMD3-202ENST00000453259 RBM5P52756 815 aaKnown RBP eCLIP18.14■□□□□ 0.49
LYSMD3-202ENST00000453259 LDHAL6AQ6ZMR3 332 aa18.14■□□□□ 0.49
LYSMD3-202ENST00000453259 FZD1Q9UP38 647 aa18.14■□□□□ 0.49
LYSMD3-202ENST00000453259 ARAP2Q8WZ64 1704 aa18.13■□□□□ 0.49
LYSMD3-202ENST00000453259 F8W031 263 aaPredicted RBP18.13■□□□□ 0.49
LYSMD3-202ENST00000453259 TNNI2P48788 182 aa18.13■□□□□ 0.49
LYSMD3-202ENST00000453259 UBE4AQ14139 1066 aa18.13■□□□□ 0.49
LYSMD3-202ENST00000453259 TAF7LQ5H9L4 462 aa18.13■□□□□ 0.49
LYSMD3-202ENST00000453259 HABP4Q5JVS0 413 aaKnown RBP18.13■□□□□ 0.49
LYSMD3-202ENST00000453259 NBPF11Q86T75 865 aa18.13■□□□□ 0.49
LYSMD3-202ENST00000453259 CD99L2Q8TCZ2 262 aa18.13■□□□□ 0.49
LYSMD3-202ENST00000453259 ZCCHC17Q9NP64 241 aaKnown RBP18.13■□□□□ 0.49
LYSMD3-202ENST00000453259 FANCIQ9NVI1 1328 aa18.13■□□□□ 0.49
LYSMD3-202ENST00000453259 POTEFA5A3E0 1075 aa18.12■□□□□ 0.49
LYSMD3-202ENST00000453259 GJA5P36382 358 aa18.12■□□□□ 0.49
LYSMD3-202ENST00000453259 GTF2A2P52657 109 aa18.12■□□□□ 0.49
LYSMD3-202ENST00000453259 MFSD14BQ5SR56 506 aa18.12■□□□□ 0.49
LYSMD3-202ENST00000453259 BEND3Q5T5X7 828 aa18.12■□□□□ 0.49
LYSMD3-202ENST00000453259 HELBQ8NG08 1087 aaPredicted RBP18.12■□□□□ 0.49
LYSMD3-202ENST00000453259 TDRD7Q8NHU6 1098 aaKnown RBP18.12■□□□□ 0.49
LYSMD3-202ENST00000453259 OPTNQ96CV9 577 aa18.12■□□□□ 0.49
LYSMD3-202ENST00000453259 TMEM106CQ9BVX2 250 aa18.12■□□□□ 0.49
LYSMD3-202ENST00000453259 CNNM1Q9NRU3 951 aa18.12■□□□□ 0.49
LYSMD3-202ENST00000453259 CHMP3Q9Y3E7 222 aa18.12■□□□□ 0.49
LYSMD3-202ENST00000453259 GRM8O00222 908 aa18.11■□□□□ 0.49
LYSMD3-202ENST00000453259 HDLBPQ00341 1268 aaKnown RBP18.11■□□□□ 0.49
LYSMD3-202ENST00000453259 LMBR1LQ6UX01 489 aa18.11■□□□□ 0.49
LYSMD3-202ENST00000453259 WDR63Q8IWG1 891 aa18.11■□□□□ 0.49
LYSMD3-202ENST00000453259 HOOK2Q96ED9 719 aa18.11■□□□□ 0.49
LYSMD3-202ENST00000453259 MS4A4AQ96JQ5 239 aa18.11■□□□□ 0.49
LYSMD3-202ENST00000453259 PTPN18Q99952 460 aa18.11■□□□□ 0.49
LYSMD3-202ENST00000453259 ZFYVE28Q9HCC9 887 aa18.11■□□□□ 0.49
LYSMD3-202ENST00000453259 ZNF70Q9UC06 446 aaPredicted RBP18.11■□□□□ 0.49
LYSMD3-202ENST00000453259 OTOFQ9HC10 1997 aa18.11■□□□□ 0.49
LYSMD3-202ENST00000453259 SNAP23O00161 211 aa18.1■□□□□ 0.49
LYSMD3-202ENST00000453259 VAMP4O75379 141 aa18.1■□□□□ 0.49
LYSMD3-202ENST00000453259 GNRH1P01148 92 aa18.1■□□□□ 0.49
LYSMD3-202ENST00000453259 ZNF333Q96JL9 665 aa18.1■□□□□ 0.49
LYSMD3-202ENST00000453259 TTF2Q9UNY4 1162 aaKnown RBP18.1■□□□□ 0.49
LYSMD3-202ENST00000453259 PCDHAC2Q9Y5I4 1007 aa18.1■□□□□ 0.49
LYSMD3-202ENST00000453259 CSADQ9Y600 493 aa18.1■□□□□ 0.49
LYSMD3-202ENST00000453259 MKI67P46013 3256 aaKnown RBP18.1■□□□□ 0.49
LYSMD3-202ENST00000453259 ALDH1L1O75891 902 aa18.09■□□□□ 0.49
LYSMD3-202ENST00000453259 HIBADHP31937 336 aaKnown RBP18.09■□□□□ 0.49
LYSMD3-202ENST00000453259 DZIP1LQ8IYY4 767 aaKnown RBP18.09■□□□□ 0.49
LYSMD3-202ENST00000453259 TBC1D22AQ8WUA7 517 aa18.09■□□□□ 0.49
LYSMD3-202ENST00000453259 TEPSINQ96N21 525 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms