RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 LPIN2Q92539 896 aa23.87■■□□□ 1.41
PDCD2-204ENST00000453163 NCOA5Q9HCD5 579 aaKnown RBP23.87■■□□□ 1.41
PDCD2-204ENST00000453163 NIP7Q9Y221 180 aaKnown RBP eCLIP23.87■■□□□ 1.41
PDCD2-204ENST00000453163 IDH1O75874 414 aaKnown RBP23.87■■□□□ 1.41
PDCD2-204ENST00000453163 LAMB2P55268 1798 aa23.87■■□□□ 1.41
PDCD2-204ENST00000453163 FAM184AQ8NB25 1140 aa23.87■■□□□ 1.41
PDCD2-204ENST00000453163 LLPHQ9BRT6 129 aaKnown RBP23.87■■□□□ 1.41
PDCD2-204ENST00000453163 TTF1Q15361 905 aaPredicted RBP23.86■■□□□ 1.41
PDCD2-204ENST00000453163 PDLIM2Q96JY6 352 aa23.86■■□□□ 1.41
PDCD2-204ENST00000453163 GPHNQ9NQX3 736 aaPredicted RBP23.86■■□□□ 1.41
PDCD2-204ENST00000453163 ATRNO75882 1429 aa23.86■■□□□ 1.41
PDCD2-204ENST00000453163 NTSR2O95665 410 aa23.86■■□□□ 1.41
PDCD2-204ENST00000453163 PARP10Q53GL7 1025 aa23.86■■□□□ 1.41
PDCD2-204ENST00000453163 ZSCAN25Q6NSZ9 544 aa23.86■■□□□ 1.41
PDCD2-204ENST00000453163 MPHOSPH8Q99549 860 aa23.86■■□□□ 1.41
PDCD2-204ENST00000453163 TFIP11Q9UBB9 837 aaKnown RBP23.86■■□□□ 1.41
PDCD2-204ENST00000453163 PTPDC1A2A3K4 754 aa23.85■■□□□ 1.41
PDCD2-204ENST00000453163 H3BQV1 296 aa23.85■■□□□ 1.41
PDCD2-204ENST00000453163 PDIA3P30101 505 aaKnown RBP23.85■■□□□ 1.41
PDCD2-204ENST00000453163 IFFO2Q5TF58 517 aa23.85■■□□□ 1.41
PDCD2-204ENST00000453163 ELP1O95163 1332 aa23.85■■□□□ 1.41
PDCD2-204ENST00000453163 BCORQ6W2J9 1755 aa23.85■■□□□ 1.41
PDCD2-204ENST00000453163 RESTQ13127 1097 aa23.85■■□□□ 1.41
PDCD2-204ENST00000453163 FAM98CQ17RN3 349 aaKnown RBP23.85■■□□□ 1.41
PDCD2-204ENST00000453163 PPFIA3O75145 1194 aa23.84■■□□□ 1.41
PDCD2-204ENST00000453163 WWC3Q9ULE0 1092 aa23.84■■□□□ 1.41
PDCD2-204ENST00000453163 MYH15Q9Y2K3 1946 aa23.84■■□□□ 1.41
PDCD2-204ENST00000453163 UQCRFS1P1P0C7P4 283 aa23.84■■□□□ 1.41
PDCD2-204ENST00000453163 FOSBP53539 338 aa23.84■■□□□ 1.41
PDCD2-204ENST00000453163 ZNF532Q9HCE3 1301 aa23.84■■□□□ 1.41
PDCD2-204ENST00000453163 SLC5A1P13866 664 aa23.83■■□□□ 1.4
PDCD2-204ENST00000453163 CCDC152Q4G0S7 254 aa23.83■■□□□ 1.4
PDCD2-204ENST00000453163 MB21D2Q8IYB1 491 aaPredicted RBP23.83■■□□□ 1.4
PDCD2-204ENST00000453163 ZNF274Q96GC6 653 aaPredicted RBP23.83■■□□□ 1.4
PDCD2-204ENST00000453163 ZNF213O14771 459 aa23.82■■□□□ 1.4
PDCD2-204ENST00000453163 LETM1O95202 739 aaPredicted RBP23.82■■□□□ 1.4
PDCD2-204ENST00000453163 COL4A1P02462 1669 aa23.82■■□□□ 1.4
PDCD2-204ENST00000453163 PDE6AP16499 860 aa23.82■■□□□ 1.4
PDCD2-204ENST00000453163 GIMAP6Q6P9H5 292 aa23.82■■□□□ 1.4
PDCD2-204ENST00000453163 DOCK2Q92608 1830 aa23.82■■□□□ 1.4
PDCD2-204ENST00000453163 SMARCC1Q92922 1105 aaPredicted RBP23.82■■□□□ 1.4
PDCD2-204ENST00000453163 SPATA32Q96LK8 384 aa23.82■■□□□ 1.4
PDCD2-204ENST00000453163 SCAND2PQ9GZW5 306 aaPredicted RBP23.82■■□□□ 1.4
PDCD2-204ENST00000453163 SALL1Q9NSC2 1324 aa23.82■■□□□ 1.4
PDCD2-204ENST00000453163 UBE3CQ15386 1083 aa23.82■■□□□ 1.4
PDCD2-204ENST00000453163 FBXL16Q8N461 479 aa23.82■■□□□ 1.4
PDCD2-204ENST00000453163 PRC1O43663 620 aa23.81■■□□□ 1.4
PDCD2-204ENST00000453163 HMGN5P82970 282 aaKnown RBP23.81■■□□□ 1.4
PDCD2-204ENST00000453163 RASGRF1Q13972 1273 aa23.81■■□□□ 1.4
PDCD2-204ENST00000453163 LEO1Q8WVC0 666 aaPredicted RBP23.81■■□□□ 1.4
PDCD2-204ENST00000453163 OFD1O75665 1012 aa23.81■■□□□ 1.4
PDCD2-204ENST00000453163 KCNQ4P56696 695 aa23.81■■□□□ 1.4
PDCD2-204ENST00000453163 SPATA5Q8NB90 893 aa23.81■■□□□ 1.4
PDCD2-204ENST00000453163 NBPF3Q9H094 633 aa23.81■■□□□ 1.4
PDCD2-204ENST00000453163 TCRBV5S4A2TA0A5A2 114 aa23.8■■□□□ 1.4
PDCD2-204ENST00000453163 MCM5P33992 734 aa23.8■■□□□ 1.4
PDCD2-204ENST00000453163 ANTXR2P58335 489 aa23.8■■□□□ 1.4
PDCD2-204ENST00000453163 HS1BP3Q53T59 392 aa23.8■■□□□ 1.4
PDCD2-204ENST00000453163 LINC00116Q8NCU8 138 aa23.8■■□□□ 1.4
PDCD2-204ENST00000453163 TOM1O60784 492 aa23.8■■□□□ 1.4
PDCD2-204ENST00000453163 LIG1P18858 919 aa23.8■■□□□ 1.4
PDCD2-204ENST00000453163 NCOA7Q8NI08 942 aa23.8■■□□□ 1.4
PDCD2-204ENST00000453163 EVCP57679 992 aa23.79■■□□□ 1.4
PDCD2-204ENST00000453163 RALYLQ86SE5 291 aaKnown RBP23.79■■□□□ 1.4
PDCD2-204ENST00000453163 CASZ1Q86V15 1759 aa23.79■■□□□ 1.4
PDCD2-204ENST00000453163 IGHMBP2P38935 993 aaKnown RBP23.79■■□□□ 1.4
PDCD2-204ENST00000453163 DENND2AQ9ULE3 1009 aa23.79■■□□□ 1.4
PDCD2-204ENST00000453163 RTL9Q8NET4 1388 aa23.79■■□□□ 1.4
PDCD2-204ENST00000453163 C8orf37Q96NL8 207 aa23.78■■□□□ 1.4
PDCD2-204ENST00000453163 ZSCAN16Q9H4T2 348 aaPredicted RBP23.78■■□□□ 1.4
PDCD2-204ENST00000453163 ZNF652Q9Y2D9 606 aa23.78■■□□□ 1.4
PDCD2-204ENST00000453163 TAF1P21675 1872 aa23.78■■□□□ 1.4
PDCD2-204ENST00000453163 APPP05067 770 aa23.78■■□□□ 1.4
PDCD2-204ENST00000453163 FUCA2Q9BTY2 467 aa23.78■■□□□ 1.4
PDCD2-204ENST00000453163 NAA16Q6N069 864 aaPredicted RBP23.77■■□□□ 1.4
PDCD2-204ENST00000453163 TBC1D10CQ8IV04 446 aa23.77■■□□□ 1.4
PDCD2-204ENST00000453163 ZNF831Q5JPB2 1677 aa23.77■■□□□ 1.4
PDCD2-204ENST00000453163 MSNP26038 577 aaKnown RBP23.77■■□□□ 1.4
PDCD2-204ENST00000453163 NKX2-3Q8TAU0 364 aa23.77■■□□□ 1.4
PDCD2-204ENST00000453163 CARMIL3Q8ND23 1372 aa23.77■■□□□ 1.4
PDCD2-204ENST00000453163 KLF18A0A0U1RQI7 1052 aa23.77■■□□□ 1.39
PDCD2-204ENST00000453163 RAB11FIP4Q86YS3 637 aa23.77■■□□□ 1.39
PDCD2-204ENST00000453163 KIF3AQ9Y496 699 aa23.77■■□□□ 1.39
PDCD2-204ENST00000453163 BCL9LQ86UU0 1499 aa23.76■■□□□ 1.39
PDCD2-204ENST00000453163 BCAMP50895 628 aa23.76■■□□□ 1.39
PDCD2-204ENST00000453163 PTF1AQ7RTS3 328 aa23.76■■□□□ 1.39
PDCD2-204ENST00000453163 MAGEB6Q8N7X4 407 aa23.76■■□□□ 1.39
PDCD2-204ENST00000453163 AIDAQ96BJ3 306 aa23.76■■□□□ 1.39
PDCD2-204ENST00000453163 GOLGA6L4A6NEF3 574 aa23.76■■□□□ 1.39
PDCD2-204ENST00000453163 GOLGA8BA8MQT2 603 aa23.76■■□□□ 1.39
PDCD2-204ENST00000453163 TERF1P54274 439 aa23.76■■□□□ 1.39
PDCD2-204ENST00000453163 GUCY1B3Q02153 619 aa23.76■■□□□ 1.39
PDCD2-204ENST00000453163 CHRNDQ07001 517 aa23.76■■□□□ 1.39
PDCD2-204ENST00000453163 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.76■■□□□ 1.39
PDCD2-204ENST00000453163 SMIM5Q71RC9 77 aa23.76■■□□□ 1.39
PDCD2-204ENST00000453163 PGBD1Q96JS3 809 aa23.76■■□□□ 1.39
PDCD2-204ENST00000453163 FDPSP14324 419 aaKnown RBP23.75■■□□□ 1.39
PDCD2-204ENST00000453163 NGLY1Q96IV0 654 aa23.75■■□□□ 1.39
PDCD2-204ENST00000453163 STRBPQ96SI9 672 aaKnown RBP23.75■■□□□ 1.39
PDCD2-204ENST00000453163 HPS5Q9UPZ3 1129 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms