RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 HOXB4P17483 251 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P26-201ENST00000452520 ST13P50502 369 aaKnown RBP8.19□□□□□ -1.1
HMGB1P26-201ENST00000452520 COL9A3Q14050 684 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P26-201ENST00000452520 RPS26P11Q5JNZ5 115 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P26-201ENST00000452520 SVOPQ8N4V2 548 aa8.19□□□□□ -1.1
HMGB1P26-201ENST00000452520 NEDD1Q8NHV4 660 aa8.19□□□□□ -1.1
HMGB1P26-201ENST00000452520 ANKRD24Q8TF21 1146 aa8.19□□□□□ -1.1
HMGB1P26-201ENST00000452520 ZNF576Q9H609 170 aa8.19□□□□□ -1.1
HMGB1P26-201ENST00000452520 PPM1HQ9ULR3 514 aa8.19□□□□□ -1.1
HMGB1P26-201ENST00000452520 FAM177BA6PVY3 158 aa8.18□□□□□ -1.1
HMGB1P26-201ENST00000452520 EPHA1P21709 976 aa8.18□□□□□ -1.1
HMGB1P26-201ENST00000452520 ZNF423Q2M1K9 1284 aa8.18□□□□□ -1.1
HMGB1P26-201ENST00000452520 MSL1Q68DK7 614 aa8.18□□□□□ -1.1
HMGB1P26-201ENST00000452520 ILDR2Q71H61 639 aa8.18□□□□□ -1.1
HMGB1P26-201ENST00000452520 CLEC4MQ9H2X3 399 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P26-201ENST00000452520 PPME1Q9Y570 386 aa8.18□□□□□ -1.1
HMGB1P26-201ENST00000452520 TCF3P15923 654 aa8.17□□□□□ -1.1
HMGB1P26-201ENST00000452520 LORP23490 312 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P26-201ENST00000452520 DGKGP49619 791 aa8.17□□□□□ -1.1
HMGB1P26-201ENST00000452520 WFDC8Q8IUA0 241 aa8.17□□□□□ -1.1
HMGB1P26-201ENST00000452520 RRAGCQ9HB90 399 aa8.17□□□□□ -1.1
HMGB1P26-201ENST00000452520 SEC31BQ9NQW1 1179 aa8.17□□□□□ -1.1
HMGB1P26-201ENST00000452520 TTF2Q9UNY4 1162 aaKnown RBP8.17□□□□□ -1.1
HMGB1P26-201ENST00000452520 NID1P14543 1247 aa8.16□□□□□ -1.1
HMGB1P26-201ENST00000452520 CDC25BP30305 580 aa8.16□□□□□ -1.1
HMGB1P26-201ENST00000452520 CABP4P57796 275 aa8.16□□□□□ -1.1
HMGB1P26-201ENST00000452520 PCDH1Q08174 1060 aa8.16□□□□□ -1.1
HMGB1P26-201ENST00000452520 FAAP100Q0VG06 881 aa8.16□□□□□ -1.1
HMGB1P26-201ENST00000452520 LINC00114Q6XXX2 140 aa8.16□□□□□ -1.1
HMGB1P26-201ENST00000452520 METTL5Q9NRN9 209 aaKnown RBP8.16□□□□□ -1.1
HMGB1P26-201ENST00000452520 LINC01387J3KSC0 135 aa8.15□□□□□ -1.1
HMGB1P26-201ENST00000452520 SOX1O00570 391 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P26-201ENST00000452520 FBXO24O75426 580 aa8.15□□□□□ -1.1
HMGB1P26-201ENST00000452520 ESRRAP11474 423 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P26-201ENST00000452520 ZNF76P36508 570 aa8.15□□□□□ -1.1
HMGB1P26-201ENST00000452520 SNRPNP63162 240 aaKnown RBP8.15□□□□□ -1.1
HMGB1P26-201ENST00000452520 FANCCQ00597 558 aa8.15□□□□□ -1.1
HMGB1P26-201ENST00000452520 IKBKEQ14164 716 aa8.15□□□□□ -1.1
HMGB1P26-201ENST00000452520 TPTE2Q6XPS3 522 aa8.15□□□□□ -1.1
HMGB1P26-201ENST00000452520 DMRTC2Q8IXT2 367 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P26-201ENST00000452520 CEP44Q9C0F1 390 aa8.15□□□□□ -1.1
HMGB1P26-201ENST00000452520 H3BRJ5 948 aa8.14□□□□□ -1.11
HMGB1P26-201ENST00000452520 B3GALT4O96024 378 aa8.14□□□□□ -1.11
HMGB1P26-201ENST00000452520 HDLBPQ00341 1268 aaKnown RBP8.14□□□□□ -1.11
HMGB1P26-201ENST00000452520 CCDC85BQ15834 202 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P26-201ENST00000452520 SV2BQ7L1I2 683 aa8.14□□□□□ -1.11
HMGB1P26-201ENST00000452520 METTL16Q86W50 562 aaKnown RBP8.14□□□□□ -1.11
HMGB1P26-201ENST00000452520 ZSCAN1Q8NBB4 408 aa8.14□□□□□ -1.11
HMGB1P26-201ENST00000452520 RNF34Q969K3 372 aa8.14□□□□□ -1.11
HMGB1P26-201ENST00000452520 NECAB3Q96P71 396 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P26-201ENST00000452520 NOC4LQ9BVI4 516 aaKnown RBP8.14□□□□□ -1.11
HMGB1P26-201ENST00000452520 TMEM39AQ9NV64 488 aa8.14□□□□□ -1.11
HMGB1P26-201ENST00000452520 ZNF157P51786 506 aaPredicted RBP8.13□□□□□ -1.11
HMGB1P26-201ENST00000452520 C9orf131Q5VYM1 1079 aa8.13□□□□□ -1.11
HMGB1P26-201ENST00000452520 FAM117BQ6P1L5 589 aa8.13□□□□□ -1.11
HMGB1P26-201ENST00000452520 TXNDC11Q6PKC3 985 aa8.13□□□□□ -1.11
HMGB1P26-201ENST00000452520 ENC1O14682 589 aa8.12□□□□□ -1.11
HMGB1P26-201ENST00000452520 FSCN2O14926 492 aa8.12□□□□□ -1.11
HMGB1P26-201ENST00000452520 TRAPPC3LQ5T215 181 aa8.12□□□□□ -1.11
HMGB1P26-201ENST00000452520 HGSNATQ68CP4 663 aa8.12□□□□□ -1.11
HMGB1P26-201ENST00000452520 WNT8BQ93098 351 aa8.12□□□□□ -1.11
HMGB1P26-201ENST00000452520 ARL4DP49703 201 aa8.11□□□□□ -1.11
HMGB1P26-201ENST00000452520 PIP4K2BP78356 416 aa8.11□□□□□ -1.11
HMGB1P26-201ENST00000452520 PPP2R3AQ06190 1150 aa8.11□□□□□ -1.11
HMGB1P26-201ENST00000452520 SETDB1Q15047 1291 aa8.11□□□□□ -1.11
HMGB1P26-201ENST00000452520 HS2ST1Q7LGA3 356 aa8.11□□□□□ -1.11
HMGB1P26-201ENST00000452520 SLC7A3Q8WY07 619 aa8.11□□□□□ -1.11
HMGB1P26-201ENST00000452520 TRIM11Q96F44 468 aa8.11□□□□□ -1.11
HMGB1P26-201ENST00000452520 SOX17Q9H6I2 414 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P26-201ENST00000452520 GPN3Q9UHW5 284 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P26-201ENST00000452520 GGT7Q9UJ14 662 aa8.11□□□□□ -1.11
HMGB1P26-201ENST00000452520 TM4SF5O14894 197 aa8.1□□□□□ -1.11
HMGB1P26-201ENST00000452520 IGSF3O75054 1194 aa8.1□□□□□ -1.11
HMGB1P26-201ENST00000452520 CELA3AP09093 270 aa8.1□□□□□ -1.11
HMGB1P26-201ENST00000452520 INSM1Q01101 510 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P26-201ENST00000452520 C19orf57Q0VDD7 668 aa8.1□□□□□ -1.11
HMGB1P26-201ENST00000452520 ERMP1Q7Z2K6 904 aa8.1□□□□□ -1.11
HMGB1P26-201ENST00000452520 NT5DC4Q86YG4 428 aa8.1□□□□□ -1.11
HMGB1P26-201ENST00000452520 DTWD1Q8N5C7 304 aa8.1□□□□□ -1.11
HMGB1P26-201ENST00000452520 DDX54Q8TDD1 881 aaKnown RBP8.1□□□□□ -1.11
HMGB1P26-201ENST00000452520 TRIM56Q9BRZ2 755 aaKnown RBP8.1□□□□□ -1.11
HMGB1P26-201ENST00000452520 RSRP1Q9BUV0 290 aa8.1□□□□□ -1.11
HMGB1P26-201ENST00000452520 PLVAPQ9BX97 442 aa8.1□□□□□ -1.11
HMGB1P26-201ENST00000452520 OSGEPQ9NPF4 335 aa8.1□□□□□ -1.11
HMGB1P26-201ENST00000452520 MKL2Q9ULH7 1088 aa8.1□□□□□ -1.11
HMGB1P26-201ENST00000452520 ADAMTS8Q9UP79 889 aa8.1□□□□□ -1.11
HMGB1P26-201ENST00000452520 GNB5O14775 395 aa8.09□□□□□ -1.11
HMGB1P26-201ENST00000452520 DEAF1O75398 565 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P26-201ENST00000452520 PAGE1O75459 146 aa8.09□□□□□ -1.11
HMGB1P26-201ENST00000452520 RLBP1P12271 317 aa8.09□□□□□ -1.11
HMGB1P26-201ENST00000452520 MAP4K3Q8IVH8 894 aa8.09□□□□□ -1.11
HMGB1P26-201ENST00000452520 BEND7Q8N7W2 519 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P26-201ENST00000452520 KLHL23Q8NBE8 558 aa8.09□□□□□ -1.11
HMGB1P26-201ENST00000452520 GALNT11Q8NCW6 608 aa8.09□□□□□ -1.11
HMGB1P26-201ENST00000452520 KLHDC7BQ96G42 594 aa8.09□□□□□ -1.11
HMGB1P26-201ENST00000452520 EIF4EBP3O60516 100 aaPredicted RBP8.08□□□□□ -1.12
HMGB1P26-201ENST00000452520 BMP6P22004 513 aa8.08□□□□□ -1.12
HMGB1P26-201ENST00000452520 NME2P22392 152 aa8.08□□□□□ -1.12
HMGB1P26-201ENST00000452520 GSTM4Q03013 218 aa8.08□□□□□ -1.12
HMGB1P26-201ENST00000452520 MAP3K11Q16584 847 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms