RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 TMEM92Q6UXU6 159 aa9.67□□□□□ -0.86
RBM39-218ENST00000449489 SLC17A8Q8NDX2 589 aa9.67□□□□□ -0.86
RBM39-218ENST00000449489 TBC1D16Q8TBP0 767 aa9.67□□□□□ -0.86
RBM39-218ENST00000449489 OXER1Q8TDS5 423 aa9.67□□□□□ -0.86
RBM39-218ENST00000449489 ZC3H12CQ9C0D7 883 aaKnown RBP9.67□□□□□ -0.86
RBM39-218ENST00000449489 MYOZ2Q9NPC6 264 aa9.67□□□□□ -0.86
RBM39-218ENST00000449489 LAMB1P07942 1786 aa9.67□□□□□ -0.86
RBM39-218ENST00000449489 SPTBN5Q9NRC6 3674 aaKnown RBP9.67□□□□□ -0.86
RBM39-218ENST00000449489 MANSC4A6NHS7 340 aaPredicted RBP9.66□□□□□ -0.86
RBM39-218ENST00000449489 UNCXA6NJT0 531 aa9.66□□□□□ -0.86
RBM39-218ENST00000449489 RIMBP2O15034 1052 aa9.66□□□□□ -0.86
RBM39-218ENST00000449489 USP17L8P0C7I0 530 aa9.66□□□□□ -0.86
RBM39-218ENST00000449489 NF2P35240 595 aa9.66□□□□□ -0.86
RBM39-218ENST00000449489 TCIRG1Q13488 830 aa9.66□□□□□ -0.86
RBM39-218ENST00000449489 LDLRAD1Q5T700 205 aa9.66□□□□□ -0.86
RBM39-218ENST00000449489 MOB2Q70IA6 237 aa9.66□□□□□ -0.86
RBM39-218ENST00000449489 ERO1AQ96HE7 468 aa9.66□□□□□ -0.86
RBM39-218ENST00000449489 CFAP53Q96M91 514 aa9.66□□□□□ -0.86
RBM39-218ENST00000449489 MIS18AQ9NYP9 233 aa9.66□□□□□ -0.86
RBM39-218ENST00000449489 TRMT112Q9UI30 125 aaKnown RBP9.66□□□□□ -0.86
RBM39-218ENST00000449489 ZBTB48P10074 688 aaPredicted RBP9.65□□□□□ -0.86
RBM39-218ENST00000449489 MLLT3P42568 568 aaPredicted RBP9.65□□□□□ -0.86
RBM39-218ENST00000449489 GPSM2P81274 684 aa9.65□□□□□ -0.86
RBM39-218ENST00000449489 DOK7Q18PE1 504 aa9.65□□□□□ -0.86
RBM39-218ENST00000449489 SPRYD7Q5W111 196 aa9.65□□□□□ -0.86
RBM39-218ENST00000449489 ARMC9Q7Z3E5 817 aa9.65□□□□□ -0.86
RBM39-218ENST00000449489 ZNF333Q96JL9 665 aa9.65□□□□□ -0.86
RBM39-218ENST00000449489 TTC28Q96AY4 2481 aa9.65□□□□□ -0.86
RBM39-218ENST00000449489 LAMA2P24043 3122 aaKnown RBP9.64□□□□□ -0.87
RBM39-218ENST00000449489 ZMYND10O75800 440 aa9.64□□□□□ -0.87
RBM39-218ENST00000449489 U2AF1L5P0DN76 240 aaPredicted RBP9.64□□□□□ -0.87
RBM39-218ENST00000449489 U2AF1Q01081 240 aaKnown RBP eCLIP9.64□□□□□ -0.872e-21■□□□□ 10.6
RBM39-218ENST00000449489 PTPN12Q05209 780 aaKnown RBP9.64□□□□□ -0.87
RBM39-218ENST00000449489 PODNQ7Z5L7 613 aa9.64□□□□□ -0.87
RBM39-218ENST00000449489 PTCD2Q8WV60 388 aaKnown RBP9.64□□□□□ -0.87
RBM39-218ENST00000449489 CELF1Q92879 486 aaKnown RBP9.64□□□□□ -0.87
RBM39-218ENST00000449489 EFCC1Q9HA90 598 aa9.64□□□□□ -0.87
RBM39-218ENST00000449489 H0YGN5 161 aa9.63□□□□□ -0.87
RBM39-218ENST00000449489 RPS8P62241 208 aaKnown RBP9.63□□□□□ -0.87
RBM39-218ENST00000449489 TTLL12Q14166 644 aaPredicted RBP9.63□□□□□ -0.87
RBM39-218ENST00000449489 ARHGEF6Q15052 776 aa9.63□□□□□ -0.87
RBM39-218ENST00000449489 MAP3K11Q16584 847 aa9.63□□□□□ -0.87
RBM39-218ENST00000449489 NBPF11Q86T75 865 aa9.63□□□□□ -0.87
RBM39-218ENST00000449489 MUC3AQ02505 3323 aa9.62□□□□□ -0.87
RBM39-218ENST00000449489 DLG5Q8TDM6 1919 aa9.62□□□□□ -0.87
RBM39-218ENST00000449489 USP17L3A6NCW0 530 aa9.62□□□□□ -0.87
RBM39-218ENST00000449489 USP17L4A6NCW7 530 aa9.62□□□□□ -0.87
RBM39-218ENST00000449489 OTUD7BQ6GQQ9 843 aa9.62□□□□□ -0.87
RBM39-218ENST00000449489 USP17L1Q7RTZ2 530 aa9.62□□□□□ -0.87
RBM39-218ENST00000449489 PRO3102Q9H379 93 aa9.62□□□□□ -0.87
RBM39-218ENST00000449489 BABAM1Q9NWV8 329 aa9.62□□□□□ -0.87
RBM39-218ENST00000449489 A0A1W2PPC1 479 aa9.61□□□□□ -0.87
RBM39-218ENST00000449489 WNT10BO00744 389 aa9.61□□□□□ -0.87
RBM39-218ENST00000449489 SP3Q02447 781 aa9.61□□□□□ -0.87
RBM39-218ENST00000449489 TRIM28Q13263 835 aaKnown RBP9.61□□□□□ -0.87
RBM39-218ENST00000449489 NBPF9Q3BBW0 867 aa9.61□□□□□ -0.87
RBM39-218ENST00000449489 PRAMEF18Q5VWM3 479 aa9.61□□□□□ -0.87
RBM39-218ENST00000449489 COPS6Q7L5N1 327 aa9.61□□□□□ -0.87
RBM39-218ENST00000449489 OGFOD1Q8N543 542 aa9.61□□□□□ -0.87
RBM39-218ENST00000449489 SLC10A4Q96EP9 437 aa9.61□□□□□ -0.87
RBM39-218ENST00000449489 THUMPD2Q9BTF0 503 aaKnown RBP9.61□□□□□ -0.87
RBM39-218ENST00000449489 GGA1Q9UJY5 639 aa9.61□□□□□ -0.87
RBM39-218ENST00000449489 COL1A1P02452 1464 aaPredicted RBP9.6□□□□□ -0.87
RBM39-218ENST00000449489 MYO3BQ8WXR4 1341 aa9.6□□□□□ -0.87
RBM39-218ENST00000449489 GRXCR2A6NFK2 248 aa9.6□□□□□ -0.87
RBM39-218ENST00000449489 IGF2BP3O00425 579 aaKnown RBP eCLIP9.6□□□□□ -0.87
RBM39-218ENST00000449489 EVI5O60447 810 aa9.6□□□□□ -0.87
RBM39-218ENST00000449489 UFL1O94874 794 aa9.6□□□□□ -0.87
RBM39-218ENST00000449489 HSP90B1P14625 803 aaKnown RBP9.6□□□□□ -0.87
RBM39-218ENST00000449489 PROSER3Q2NL68 480 aa9.6□□□□□ -0.87
RBM39-218ENST00000449489 APOBEC3FQ8IUX4 373 aaKnown RBP9.6□□□□□ -0.87
RBM39-218ENST00000449489 CD99L2Q8TCZ2 262 aa9.6□□□□□ -0.87
RBM39-218ENST00000449489 ISCA1Q9BUE6 129 aa9.6□□□□□ -0.87
RBM39-218ENST00000449489 RBM27Q9P2N5 1060 aaKnown RBP9.6□□□□□ -0.87
RBM39-218ENST00000449489 NEFMP07197 916 aa9.59□□□□□ -0.87
RBM39-218ENST00000449489 CRHR2Q13324 411 aa9.59□□□□□ -0.87
RBM39-218ENST00000449489 SLC9C1Q4G0N8 1177 aa9.59□□□□□ -0.87
RBM39-218ENST00000449489 XAGE3Q8WTP9 111 aa9.59□□□□□ -0.87
RBM39-218ENST00000449489 FAM89AQ96GI7 184 aa9.59□□□□□ -0.87
RBM39-218ENST00000449489 ANKIB1Q9P2G1 1089 aa9.59□□□□□ -0.87
RBM39-218ENST00000449489 DAXXQ9UER7 740 aaPredicted RBP9.59□□□□□ -0.87
RBM39-218ENST00000449489 ANGEL1Q9UNK9 670 aaKnown RBP9.59□□□□□ -0.87
RBM39-218ENST00000449489 ZNF646O15015 1829 aaPredicted RBP9.59□□□□□ -0.88
RBM39-218ENST00000449489 PPP1R12BO60237 982 aaPredicted RBP9.58□□□□□ -0.88
RBM39-218ENST00000449489 EIF2S2P20042 333 aaKnown RBP9.58□□□□□ -0.88
RBM39-218ENST00000449489 ATP2B4P23634 1241 aa9.58□□□□□ -0.88
RBM39-218ENST00000449489 SLC4A8Q2Y0W8 1093 aa9.58□□□□□ -0.88
RBM39-218ENST00000449489 DACT2Q5SW24 774 aa9.58□□□□□ -0.88
RBM39-218ENST00000449489 STRIP1Q5VSL9 837 aa9.58□□□□□ -0.88
RBM39-218ENST00000449489 GPR153Q6NV75 609 aa9.58□□□□□ -0.88
RBM39-218ENST00000449489 PLBD2Q8NHP8 589 aa9.58□□□□□ -0.88
RBM39-218ENST00000449489 ZBED3Q96IU2 234 aaPredicted RBP9.58□□□□□ -0.88
RBM39-218ENST00000449489 WNK4Q96J92 1243 aa9.58□□□□□ -0.88
RBM39-218ENST00000449489 SCAF8Q9UPN6 1271 aaKnown RBP9.58□□□□□ -0.88
RBM39-218ENST00000449489 PPP2R3BQ9Y5P8 575 aa9.58□□□□□ -0.88
RBM39-218ENST00000449489 COL4A1P02462 1669 aa9.58□□□□□ -0.88
RBM39-218ENST00000449489 XDHP47989 1333 aa9.57□□□□□ -0.88
RBM39-218ENST00000449489 PRUNE2Q8WUY3 3088 aa9.57□□□□□ -0.88
RBM39-218ENST00000449489 ANXA1P04083 346 aa9.57□□□□□ -0.88
RBM39-218ENST00000449489 AIMP1Q12904 312 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms