RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 LCE2DQ5TA82 110 aaPredicted RBP11.35□□□□□ -0.59
RFX3-207ENST00000449190 USP17L1Q7RTZ2 530 aa11.35□□□□□ -0.59
RFX3-207ENST00000449190 AGBL3Q8NEM8 1001 aa11.35□□□□□ -0.59
RFX3-207ENST00000449190 KLHDC4Q8TBB5 520 aa11.35□□□□□ -0.59
RFX3-207ENST00000449190 ZC3H15Q8WU90 426 aaKnown RBP11.35□□□□□ -0.59
RFX3-207ENST00000449190 RWDD1Q9H446 243 aaPredicted RBP11.35□□□□□ -0.59
RFX3-207ENST00000449190 CEP126Q9P2H0 1117 aa11.35□□□□□ -0.59
RFX3-207ENST00000449190 PGAP2Q9UHJ9 254 aa11.35□□□□□ -0.59
RFX3-207ENST00000449190 MED23Q9ULK4 1368 aa11.35□□□□□ -0.59
RFX3-207ENST00000449190 PASKQ96RG2 1323 aa11.35□□□□□ -0.59
RFX3-207ENST00000449190 TAF5LO75529 589 aa11.34□□□□□ -0.59
RFX3-207ENST00000449190 RSBN1LQ6PCB5 846 aaPredicted RBP11.34□□□□□ -0.59
RFX3-207ENST00000449190 TXNRD3Q86VQ6 643 aa11.34□□□□□ -0.59
RFX3-207ENST00000449190 ERC1Q8IUD2 1116 aa11.34□□□□□ -0.59
RFX3-207ENST00000449190 MICALL2Q8IY33 904 aa11.34□□□□□ -0.59
RFX3-207ENST00000449190 HELBQ8NG08 1087 aaPredicted RBP11.34□□□□□ -0.59
RFX3-207ENST00000449190 PA2G4Q9UQ80 394 aaKnown RBP11.34□□□□□ -0.59
RFX3-207ENST00000449190 RIPOR2Q9Y4F9 1068 aa11.34□□□□□ -0.59
RFX3-207ENST00000449190 C7P10643 843 aa11.33□□□□□ -0.6
RFX3-207ENST00000449190 HIRAP54198 1017 aaPredicted RBP11.33□□□□□ -0.6
RFX3-207ENST00000449190 UBE4AQ14139 1066 aa11.33□□□□□ -0.6
RFX3-207ENST00000449190 LRRC24Q50LG9 513 aa11.33□□□□□ -0.6
RFX3-207ENST00000449190 STRIP1Q5VSL9 837 aa11.33□□□□□ -0.6
RFX3-207ENST00000449190 MAP1SQ66K74 1059 aaPredicted RBP11.33□□□□□ -0.6
RFX3-207ENST00000449190 SLC39A7Q92504 469 aa11.33□□□□□ -0.6
RFX3-207ENST00000449190 PUS3Q9BZE2 481 aaKnown RBP11.33□□□□□ -0.6
RFX3-207ENST00000449190 CD209Q9NNX6 404 aa11.33□□□□□ -0.6
RFX3-207ENST00000449190 ZBTB47Q9UFB7 747 aaPredicted RBP11.33□□□□□ -0.6
RFX3-207ENST00000449190 PCDHB15Q9Y5E8 787 aa11.33□□□□□ -0.6
RFX3-207ENST00000449190 ATMINO43313 823 aaPredicted RBP11.32□□□□□ -0.6
RFX3-207ENST00000449190 RAB11FIP3O75154 756 aa11.32□□□□□ -0.6
RFX3-207ENST00000449190 MNX1P50219 401 aaPredicted RBP11.32□□□□□ -0.6
RFX3-207ENST00000449190 MMP14P50281 582 aa11.32□□□□□ -0.6
RFX3-207ENST00000449190 HTRA3P83110 453 aa11.32□□□□□ -0.6
RFX3-207ENST00000449190 TTLL5Q6EMB2 1281 aa11.32□□□□□ -0.6
RFX3-207ENST00000449190 GMLQ99445 158 aa11.32□□□□□ -0.6
RFX3-207ENST00000449190 AKAP2Q9Y2D5 859 aa11.32□□□□□ -0.6
RFX3-207ENST00000449190 NOP58Q9Y2X3 529 aaKnown RBP11.32□□□□□ -0.6
RFX3-207ENST00000449190 MYH3P11055 1940 aa11.32□□□□□ -0.6
RFX3-207ENST00000449190 IRS2Q9Y4H2 1338 aa11.32□□□□□ -0.6
RFX3-207ENST00000449190 LTBP1Q14766 1721 aa11.32□□□□□ -0.6
RFX3-207ENST00000449190 SHTN1A0MZ66 631 aa11.31□□□□□ -0.6
RFX3-207ENST00000449190 TMEM88BA6NKF7 163 aa11.31□□□□□ -0.6
RFX3-207ENST00000449190 SNAP23O00161 211 aa11.31□□□□□ -0.6
RFX3-207ENST00000449190 PDE8BO95263 885 aa11.31□□□□□ -0.6
RFX3-207ENST00000449190 ZNF280AP59817 542 aaPredicted RBP11.31□□□□□ -0.6
RFX3-207ENST00000449190 HDAC1Q13547 482 aaPredicted RBP11.31□□□□□ -0.6
RFX3-207ENST00000449190 ERICH6BQ5W0A0 696 aa11.31□□□□□ -0.6
RFX3-207ENST00000449190 MAMSTRQ6ZN01 415 aa11.31□□□□□ -0.6
RFX3-207ENST00000449190 CDC37L1Q7L3B6 337 aa11.31□□□□□ -0.6
RFX3-207ENST00000449190 ATG9AQ7Z3C6 839 aa11.31□□□□□ -0.6
RFX3-207ENST00000449190 SAMD7Q7Z3H4 446 aa11.31□□□□□ -0.6
RFX3-207ENST00000449190 SIRT2Q8IXJ6 389 aa11.31□□□□□ -0.6
RFX3-207ENST00000449190 TRPM4Q8TD43 1214 aa11.31□□□□□ -0.6
RFX3-207ENST00000449190 KLRG1Q96E93 195 aa11.31□□□□□ -0.6
RFX3-207ENST00000449190 APBB1O00213 710 aa11.3□□□□□ -0.6
RFX3-207ENST00000449190 IFIT1P09914 478 aaKnown RBP11.3□□□□□ -0.6
RFX3-207ENST00000449190 USP17L8P0C7I0 530 aa11.3□□□□□ -0.6
RFX3-207ENST00000449190 IL1R1P14778 569 aa11.3□□□□□ -0.6
RFX3-207ENST00000449190 KLRK1P26718 216 aa11.3□□□□□ -0.6
RFX3-207ENST00000449190 TFCP2Q12800 502 aa11.3□□□□□ -0.6
RFX3-207ENST00000449190 PUM3Q15397 648 aaKnown RBP11.3□□□□□ -0.6
RFX3-207ENST00000449190 TBC1D10BQ4KMP7 808 aaPredicted RBP11.3□□□□□ -0.6
RFX3-207ENST00000449190 DACT2Q5SW24 774 aa11.3□□□□□ -0.6
RFX3-207ENST00000449190 RBM26Q5T8P6 1007 aaKnown RBP11.3□□□□□ -0.6
RFX3-207ENST00000449190 ZNF804AQ7Z570 1209 aa11.3□□□□□ -0.6
RFX3-207ENST00000449190 KIF1BPQ96EK5 621 aa11.3□□□□□ -0.6
RFX3-207ENST00000449190 MS4A3Q96HJ5 214 aa11.3□□□□□ -0.6
RFX3-207ENST00000449190 EXOC6BQ9Y2D4 811 aa11.3□□□□□ -0.6
RFX3-207ENST00000449190 MYO3BQ8WXR4 1341 aa11.3□□□□□ -0.6
RFX3-207ENST00000449190 ZNF609O15014 1411 aa11.29□□□□□ -0.6
RFX3-207ENST00000449190 SASH1O94885 1247 aa11.29□□□□□ -0.6
RFX3-207ENST00000449190 SLC5A1P13866 664 aa11.29□□□□□ -0.6
RFX3-207ENST00000449190 GTF2IP78347 998 aa11.29□□□□□ -0.6
RFX3-207ENST00000449190 KIF4BQ2VIQ3 1234 aa11.29□□□□□ -0.6
RFX3-207ENST00000449190 CAVIN4Q5BKX8 364 aa11.29□□□□□ -0.6
RFX3-207ENST00000449190 GORABQ5T7V8 394 aa11.29□□□□□ -0.6
RFX3-207ENST00000449190 OGFOD1Q8N543 542 aa11.29□□□□□ -0.6
RFX3-207ENST00000449190 LPIN2Q92539 896 aa11.29□□□□□ -0.6
RFX3-207ENST00000449190 GCC1Q96CN9 775 aa11.29□□□□□ -0.6
RFX3-207ENST00000449190 FAM84BQ96KN1 310 aaPredicted RBP11.29□□□□□ -0.6
RFX3-207ENST00000449190 DCTPP1Q9H773 170 aa11.29□□□□□ -0.6
RFX3-207ENST00000449190 HIBADHP31937 336 aaKnown RBP11.28□□□□□ -0.6
RFX3-207ENST00000449190 FKBP1AP62942 108 aaKnown RBP11.28□□□□□ -0.6
RFX3-207ENST00000449190 ATP2B3Q16720 1220 aa11.28□□□□□ -0.6
RFX3-207ENST00000449190 FBXO33Q7Z6M2 555 aa11.28□□□□□ -0.6
RFX3-207ENST00000449190 VPS37DQ86XT2 251 aa11.28□□□□□ -0.6
RFX3-207ENST00000449190 CLASRPQ8N2M8 674 aaKnown RBP11.28□□□□□ -0.6
RFX3-207ENST00000449190 JMYQ8N9B5 988 aa11.28□□□□□ -0.6
RFX3-207ENST00000449190 TDRD7Q8NHU6 1098 aaKnown RBP11.28□□□□□ -0.6
RFX3-207ENST00000449190 FBXW7Q969H0 707 aa11.28□□□□□ -0.6
RFX3-207ENST00000449190 DCPSQ96C86 337 aaKnown RBP11.28□□□□□ -0.6
RFX3-207ENST00000449190 NEUROD6Q96NK8 337 aa11.28□□□□□ -0.6
RFX3-207ENST00000449190 LRRCC1Q9C099 1032 aa11.28□□□□□ -0.6
RFX3-207ENST00000449190 BCL11AQ9H165 835 aa11.28□□□□□ -0.6
RFX3-207ENST00000449190 GPR108Q9NPR9 543 aa11.28□□□□□ -0.6
RFX3-207ENST00000449190 ADAMTSL1Q8N6G6 1762 aa11.27□□□□□ -0.61
RFX3-207ENST00000449190 EGFRP00533 1210 aa11.27□□□□□ -0.61
RFX3-207ENST00000449190 SCARF1Q14162 830 aa11.27□□□□□ -0.61
RFX3-207ENST00000449190 DEFB115Q30KQ5 88 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms