RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 JDP2Q8WYK2 163 aa17.82■□□□□ 0.44
SHANK2-210ENST00000449116 DNAJC2Q99543 621 aaKnown RBP17.82■□□□□ 0.44
SHANK2-210ENST00000449116 SNRKQ9NRH2 765 aa17.82■□□□□ 0.44
SHANK2-210ENST00000449116 COL1A1P02452 1464 aaPredicted RBP17.82■□□□□ 0.44
SHANK2-210ENST00000449116 COL4A5P29400 1685 aa17.81■□□□□ 0.44
SHANK2-210ENST00000449116 GSPT1P15170 499 aaKnown RBP17.81■□□□□ 0.44
SHANK2-210ENST00000449116 ZAP70P43403 619 aa17.81■□□□□ 0.44
SHANK2-210ENST00000449116 PI16Q6UXB8 463 aa17.81■□□□□ 0.44
SHANK2-210ENST00000449116 NDUFB9Q9Y6M9 179 aa17.81■□□□□ 0.44
SHANK2-210ENST00000449116 MAP4K4O95819 1239 aaPredicted RBP17.8■□□□□ 0.44
SHANK2-210ENST00000449116 CHAF1AQ13111 956 aaPredicted RBP17.8■□□□□ 0.44
SHANK2-210ENST00000449116 BMP2KLQ5H9B9 411 aa17.8■□□□□ 0.44
SHANK2-210ENST00000449116 PAG1Q9NWQ8 432 aa17.8■□□□□ 0.44
SHANK2-210ENST00000449116 ZNRF3Q9ULT6 936 aa17.8■□□□□ 0.44
SHANK2-210ENST00000449116 AKAP11Q9UKA4 1901 aa17.8■□□□□ 0.44
SHANK2-210ENST00000449116 FAM205AQ6ZU69 1335 aa17.79■□□□□ 0.44
SHANK2-210ENST00000449116 YDJCA8MPS7 323 aa17.79■□□□□ 0.44
SHANK2-210ENST00000449116 TRIM6-TRIM34B2RNG4 842 aa17.79■□□□□ 0.44
SHANK2-210ENST00000449116 GOLIM4O00461 696 aa17.79■□□□□ 0.44
SHANK2-210ENST00000449116 CNTROBQ8N137 903 aa17.79■□□□□ 0.44
SHANK2-210ENST00000449116 WDR66Q8TBY9 1149 aa17.79■□□□□ 0.44
SHANK2-210ENST00000449116 CYP2E1P05181 493 aaPredicted RBP17.78■□□□□ 0.44
SHANK2-210ENST00000449116 GTF2IP78347 998 aa17.78■□□□□ 0.44
SHANK2-210ENST00000449116 TTF1Q15361 905 aaPredicted RBP17.78■□□□□ 0.44
SHANK2-210ENST00000449116 TTLL5Q6EMB2 1281 aa17.78■□□□□ 0.44
SHANK2-210ENST00000449116 EVI5LQ96CN4 794 aa17.78■□□□□ 0.44
SHANK2-210ENST00000449116 EDC3Q96F86 508 aaKnown RBP17.78■□□□□ 0.44
SHANK2-210ENST00000449116 ANTXR1Q9H6X2 564 aa17.78■□□□□ 0.44
SHANK2-210ENST00000449116 JAG2Q9Y219 1238 aa17.78■□□□□ 0.44
SHANK2-210ENST00000449116 MYH13Q9UKX3 1938 aa17.78■□□□□ 0.44
SHANK2-210ENST00000449116 SALL1Q9NSC2 1324 aa17.77■□□□□ 0.44
SHANK2-210ENST00000449116 USP17L3A6NCW0 530 aa17.77■□□□□ 0.44
SHANK2-210ENST00000449116 USP17L4A6NCW7 530 aa17.77■□□□□ 0.44
SHANK2-210ENST00000449116 STRIP1Q5VSL9 837 aa17.77■□□□□ 0.44
SHANK2-210ENST00000449116 USP17L1Q7RTZ2 530 aa17.77■□□□□ 0.44
SHANK2-210ENST00000449116 ZGPATQ8N5A5 531 aaKnown RBP17.77■□□□□ 0.44
SHANK2-210ENST00000449116 TBC1D22AQ8WUA7 517 aa17.77■□□□□ 0.44
SHANK2-210ENST00000449116 FBXW7Q969H0 707 aa17.77■□□□□ 0.44
SHANK2-210ENST00000449116 RILPL2Q969X0 211 aa17.77■□□□□ 0.44
SHANK2-210ENST00000449116 KCNQ5Q9NR82 932 aa17.77■□□□□ 0.44
SHANK2-210ENST00000449116 CHD4Q14839 1912 aa17.76■□□□□ 0.43
SHANK2-210ENST00000449116 UTRNP46939 3433 aa17.76■□□□□ 0.43
SHANK2-210ENST00000449116 DCAF8L1A6NGE4 600 aa17.76■□□□□ 0.43
SHANK2-210ENST00000449116 SDSP20132 328 aa17.76■□□□□ 0.43
SHANK2-210ENST00000449116 PIH1D3Q9NQM4 214 aaKnown RBP17.76■□□□□ 0.43
SHANK2-210ENST00000449116 RNF181Q9P0P0 153 aa17.76■□□□□ 0.43
SHANK2-210ENST00000449116 SBF1O95248 1867 aa17.75■□□□□ 0.43
SHANK2-210ENST00000449116 FZD9O00144 591 aa17.75■□□□□ 0.43
SHANK2-210ENST00000449116 EIF6P56537 245 aaKnown RBP17.75■□□□□ 0.43
SHANK2-210ENST00000449116 FKBP1AP62942 108 aaKnown RBP17.75■□□□□ 0.43
SHANK2-210ENST00000449116 MFSD14BQ5SR56 506 aa17.75■□□□□ 0.43
SHANK2-210ENST00000449116 C9orf131Q5VYM1 1079 aa17.75■□□□□ 0.43
SHANK2-210ENST00000449116 TBC1D9Q6ZT07 1266 aa17.75■□□□□ 0.43
SHANK2-210ENST00000449116 KBTBD3Q8NAB2 608 aa17.75■□□□□ 0.43
SHANK2-210ENST00000449116 FSD1Q9BTV5 496 aa17.75■□□□□ 0.43
SHANK2-210ENST00000449116 ABCF2Q9UG63 623 aa17.75■□□□□ 0.43
SHANK2-210ENST00000449116 SCN9AQ15858 1988 aa17.75■□□□□ 0.43
SHANK2-210ENST00000449116 CCDC88AQ3V6T2 1871 aa17.74■□□□□ 0.43
SHANK2-210ENST00000449116 RAD17O75943 681 aa17.74■□□□□ 0.43
SHANK2-210ENST00000449116 DACT2Q5SW24 774 aa17.74■□□□□ 0.43
SHANK2-210ENST00000449116 SPTY2D1Q68D10 685 aaPredicted RBP17.74■□□□□ 0.43
SHANK2-210ENST00000449116 LRP2BPQ9P2M1 347 aa17.74■□□□□ 0.43
SHANK2-210ENST00000449116 DICER1Q9UPY3 1922 aaKnown RBP17.74■□□□□ 0.43
SHANK2-210ENST00000449116 PSMD14O00487 310 aa17.73■□□□□ 0.43
SHANK2-210ENST00000449116 IGSF3O75054 1194 aa17.73■□□□□ 0.43
SHANK2-210ENST00000449116 IDH1O75874 414 aaKnown RBP17.73■□□□□ 0.43
SHANK2-210ENST00000449116 CXCL9Q07325 125 aa17.73■□□□□ 0.43
SHANK2-210ENST00000449116 MAP3K12Q12852 859 aa17.73■□□□□ 0.43
SHANK2-210ENST00000449116 CIAPIN1Q6FI81 312 aa17.73■□□□□ 0.43
SHANK2-210ENST00000449116 ERICH6Q7L0X2 663 aa17.73■□□□□ 0.43
SHANK2-210ENST00000449116 TICAM2Q86XR7 235 aa17.73■□□□□ 0.43
SHANK2-210ENST00000449116 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.73■□□□□ 0.43
SHANK2-210ENST00000449116 SUGT1Q9Y2Z0 365 aa17.73■□□□□ 0.43
SHANK2-210ENST00000449116 RFX7Q2KHR2 1363 aa17.73■□□□□ 0.43
SHANK2-210ENST00000449116 MYO3BQ8WXR4 1341 aa17.72■□□□□ 0.43
SHANK2-210ENST00000449116 LDHBP07195 334 aaKnown RBP17.72■□□□□ 0.43
SHANK2-210ENST00000449116 VIL1P09327 827 aaKnown RBP17.72■□□□□ 0.43
SHANK2-210ENST00000449116 TNIP1Q15025 636 aa17.72■□□□□ 0.43
SHANK2-210ENST00000449116 LRRFIP1Q32MZ4 808 aaKnown RBP17.72■□□□□ 0.43
SHANK2-210ENST00000449116 RSBN1LQ6PCB5 846 aaPredicted RBP17.72■□□□□ 0.43
SHANK2-210ENST00000449116 CERS5Q8N5B7 392 aa17.72■□□□□ 0.43
SHANK2-210ENST00000449116 MXD3Q9BW11 206 aa17.72■□□□□ 0.43
SHANK2-210ENST00000449116 RAI14Q9P0K7 980 aa17.72■□□□□ 0.43
SHANK2-210ENST00000449116 PSME4Q14997 1843 aa17.72■□□□□ 0.43
SHANK2-210ENST00000449116 ZNF646O15015 1829 aaPredicted RBP17.71■□□□□ 0.43
SHANK2-210ENST00000449116 PRDX5P30044 214 aa17.71■□□□□ 0.43
SHANK2-210ENST00000449116 ZSCAN25Q6NSZ9 544 aa17.71■□□□□ 0.43
SHANK2-210ENST00000449116 ZNF541Q9H0D2 1346 aa17.71■□□□□ 0.42
SHANK2-210ENST00000449116 DOCK2Q92608 1830 aa17.7■□□□□ 0.42
SHANK2-210ENST00000449116 GRIK5Q16478 980 aa17.7■□□□□ 0.42
SHANK2-210ENST00000449116 ZC3H4Q9UPT8 1303 aaKnown RBP17.7■□□□□ 0.42
SHANK2-210ENST00000449116 TIAM2Q8IVF5 1701 aa17.69■□□□□ 0.42
SHANK2-210ENST00000449116 HIP1O00291 1037 aa17.69■□□□□ 0.42
SHANK2-210ENST00000449116 RNF113AO15541 343 aaKnown RBP17.69■□□□□ 0.42
SHANK2-210ENST00000449116 CDC45O75419 566 aa17.69■□□□□ 0.42
SHANK2-210ENST00000449116 ZFYP08048 801 aaPredicted RBP17.69■□□□□ 0.42
SHANK2-210ENST00000449116 SLC9C2Q5TAH2 1124 aa17.69■□□□□ 0.42
SHANK2-210ENST00000449116 TMED8Q6PL24 325 aaPredicted RBP17.69■□□□□ 0.42
SHANK2-210ENST00000449116 DZIP1Q86YF9 867 aaKnown RBP17.69■□□□□ 0.42
SHANK2-210ENST00000449116 MAGEB6Q8N7X4 407 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms