RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 CIAPIN1Q6FI81 312 aa7.58□□□□□ -1.2
SDCBP-205ENST00000447267 LYPD4Q6UWN0 246 aa7.58□□□□□ -1.2
SDCBP-205ENST00000447267 CNTROBQ8N137 903 aa7.58□□□□□ -1.2
SDCBP-205ENST00000447267 CNKSR1Q969H4 720 aa7.58□□□□□ -1.2
SDCBP-205ENST00000447267 NUDT16Q96DE0 195 aaKnown RBP7.58□□□□□ -1.2
SDCBP-205ENST00000447267 XAGE2Q96GT9 111 aa7.58□□□□□ -1.2
SDCBP-205ENST00000447267 ESYT1Q9BSJ8 1104 aa7.58□□□□□ -1.2
SDCBP-205ENST00000447267 CCDC87Q9NVE4 849 aa7.58□□□□□ -1.2
SDCBP-205ENST00000447267 NSD2O96028 1365 aa7.58□□□□□ -1.2
SDCBP-205ENST00000447267 GNRH1P01148 92 aa7.57□□□□□ -1.2
SDCBP-205ENST00000447267 IL2RBP14784 551 aa7.57□□□□□ -1.2
SDCBP-205ENST00000447267 MAP2K2P36507 400 aa7.57□□□□□ -1.2
SDCBP-205ENST00000447267 RIPOR1Q6ZS17 1223 aa7.57□□□□□ -1.2
SDCBP-205ENST00000447267 ZNF592Q92610 1267 aa7.57□□□□□ -1.2
SDCBP-205ENST00000447267 ZIC5Q96T25 663 aa7.57□□□□□ -1.2
SDCBP-205ENST00000447267 TAF1DQ9H5J8 278 aaPredicted RBP7.57□□□□□ -1.2
SDCBP-205ENST00000447267 ETNK1Q9HBU6 452 aa7.57□□□□□ -1.2
SDCBP-205ENST00000447267 NLRP2Q9NX02 1062 aa7.57□□□□□ -1.2
SDCBP-205ENST00000447267 LTBP1Q14766 1721 aa7.57□□□□□ -1.2
SDCBP-205ENST00000447267 SZT2Q5T011 3432 aa7.56□□□□□ -1.2
SDCBP-205ENST00000447267 KDM6AO15550 1401 aaPredicted RBP7.56□□□□□ -1.2
SDCBP-205ENST00000447267 PIK3CDO00329 1044 aa7.56□□□□□ -1.2
SDCBP-205ENST00000447267 EIF4G2P78344 907 aaKnown RBP eCLIP7.56□□□□□ -1.2
SDCBP-205ENST00000447267 KCNMA1Q12791 1236 aa7.56□□□□□ -1.2
SDCBP-205ENST00000447267 GTPBP3Q969Y2 492 aaKnown RBP7.56□□□□□ -1.2
SDCBP-205ENST00000447267 POM121Q96HA1 1249 aa7.56□□□□□ -1.2
SDCBP-205ENST00000447267 GAS2L1Q99501 681 aaPredicted RBP7.56□□□□□ -1.2
SDCBP-205ENST00000447267 DOLKQ9UPQ8 538 aa7.56□□□□□ -1.2
SDCBP-205ENST00000447267 COG6Q9Y2V7 657 aa7.56□□□□□ -1.2
SDCBP-205ENST00000447267 KAT6BQ8WYB5 2073 aa7.56□□□□□ -1.2
SDCBP-205ENST00000447267 KIAA1551Q9HCM1 1747 aa7.55□□□□□ -1.2
SDCBP-205ENST00000447267 SCNN1DP51172 638 aa7.55□□□□□ -1.2
SDCBP-205ENST00000447267 SRSF11Q05519 484 aaKnown RBP7.55□□□□□ -1.2
SDCBP-205ENST00000447267 UBAP2LQ14157 1087 aaKnown RBP7.55□□□□□ -1.2
SDCBP-205ENST00000447267 CFAP70Q5T0N1 1121 aa7.55□□□□□ -1.2
SDCBP-205ENST00000447267 RNF135Q8IUD6 432 aa7.55□□□□□ -1.2
SDCBP-205ENST00000447267 SVOPQ8N4V2 548 aa7.55□□□□□ -1.2
SDCBP-205ENST00000447267 SNX27Q96L92 541 aa7.55□□□□□ -1.2
SDCBP-205ENST00000447267 TIMMDC1Q9NPL8 285 aa7.55□□□□□ -1.2
SDCBP-205ENST00000447267 DDX21Q9NR30 783 aaKnown RBP eCLIP7.55□□□□□ -1.2
SDCBP-205ENST00000447267 USP47Q96K76 1375 aa7.55□□□□□ -1.2
SDCBP-205ENST00000447267 CCDC7Q96M83 1385 aa7.55□□□□□ -1.2
SDCBP-205ENST00000447267 NFKBIEO00221 500 aa7.54□□□□□ -1.2
SDCBP-205ENST00000447267 MYCP01106 439 aaPredicted RBP7.54□□□□□ -1.2
SDCBP-205ENST00000447267 CELA2BP08218 269 aaPredicted RBP7.54□□□□□ -1.2
SDCBP-205ENST00000447267 PLA2G5P39877 138 aa7.54□□□□□ -1.2
SDCBP-205ENST00000447267 PHKA2P46019 1235 aa7.54□□□□□ -1.2
SDCBP-205ENST00000447267 FAM50AQ14320 339 aaKnown RBP7.54□□□□□ -1.2
SDCBP-205ENST00000447267 C4orf17Q53FE4 359 aa7.54□□□□□ -1.2
SDCBP-205ENST00000447267 OXLD1Q5BKU9 147 aa7.54□□□□□ -1.2
SDCBP-205ENST00000447267 WDR44Q5JSH3 913 aa7.54□□□□□ -1.2
SDCBP-205ENST00000447267 TAS1R3Q7RTX0 852 aa7.54□□□□□ -1.2
SDCBP-205ENST00000447267 ARHGEF25Q86VW2 580 aa7.54□□□□□ -1.2
SDCBP-205ENST00000447267 FAM122AQ96E09 287 aa7.54□□□□□ -1.2
SDCBP-205ENST00000447267 KNDC1Q76NI1 1749 aa7.54□□□□□ -1.2
SDCBP-205ENST00000447267 VPS8Q8N3P4 1428 aa7.53□□□□□ -1.2
SDCBP-205ENST00000447267 SSFA2P28290 1259 aa7.53□□□□□ -1.2
SDCBP-205ENST00000447267 TMF1P82094 1093 aa7.53□□□□□ -1.2
SDCBP-205ENST00000447267 NBPF1Q3BBV0 1214 aa7.53□□□□□ -1.2
SDCBP-205ENST00000447267 SLFNL1Q499Z3 407 aa7.53□□□□□ -1.2
SDCBP-205ENST00000447267 CST9Q5W186 159 aa7.53□□□□□ -1.2
SDCBP-205ENST00000447267 CTU1Q7Z7A3 348 aaKnown RBP7.53□□□□□ -1.2
SDCBP-205ENST00000447267 GPAMQ9HCL2 828 aa7.53□□□□□ -1.2
SDCBP-205ENST00000447267 TRAK1Q9UPV9 953 aa7.53□□□□□ -1.2
SDCBP-205ENST00000447267 PARP3Q9Y6F1 533 aa7.53□□□□□ -1.2
SDCBP-205ENST00000447267 ANKRD36BQ8N2N9 1353 aa7.53□□□□□ -1.2
SDCBP-205ENST00000447267 ABCC6O95255 1503 aa7.52□□□□□ -1.2
SDCBP-205ENST00000447267 QRICH2Q9H0J4 1663 aa7.52□□□□□ -1.21
SDCBP-205ENST00000447267 F11P03951 625 aa7.52□□□□□ -1.21
SDCBP-205ENST00000447267 ZNF295-AS1Q8N0V1 137 aa7.52□□□□□ -1.21
SDCBP-205ENST00000447267 ZSCAN10Q96SZ4 725 aaPredicted RBP7.52□□□□□ -1.21
SDCBP-205ENST00000447267 C14orf93Q9H972 538 aaKnown RBP7.52□□□□□ -1.21
SDCBP-205ENST00000447267 MBIPQ9NS73 344 aa7.52□□□□□ -1.21
SDCBP-205ENST00000447267 PIK3C2AO00443 1686 aa7.51□□□□□ -1.21
SDCBP-205ENST00000447267 H0YGN5 161 aa7.51□□□□□ -1.21
SDCBP-205ENST00000447267 TRAF5O00463 557 aa7.51□□□□□ -1.21
SDCBP-205ENST00000447267 NLGN1Q8N2Q7 840 aa7.51□□□□□ -1.21
SDCBP-205ENST00000447267 KCTD17Q8N5Z5 321 aa7.51□□□□□ -1.21
SDCBP-205ENST00000447267 PLPP7Q8NBV4 271 aa7.51□□□□□ -1.21
SDCBP-205ENST00000447267 LINC00116Q8NCU8 138 aa7.51□□□□□ -1.21
SDCBP-205ENST00000447267 ACDQ96AP0 544 aa7.51□□□□□ -1.21
SDCBP-205ENST00000447267 GMCL1Q96IK5 515 aa7.51□□□□□ -1.21
SDCBP-205ENST00000447267 NUCKS1Q9H1E3 243 aaKnown RBP7.51□□□□□ -1.21
SDCBP-205ENST00000447267 USP3Q9Y6I4 520 aa7.51□□□□□ -1.21
SDCBP-205ENST00000447267 SBF1O95248 1867 aa7.51□□□□□ -1.21
SDCBP-205ENST00000447267 IQCA1LA6NCM1 817 aa7.5□□□□□ -1.21
SDCBP-205ENST00000447267 TRPA1O75762 1119 aa7.5□□□□□ -1.21
SDCBP-205ENST00000447267 USP4Q13107 963 aa7.5□□□□□ -1.21
SDCBP-205ENST00000447267 RUBCNLQ9H714 662 aa7.5□□□□□ -1.21
SDCBP-205ENST00000447267 HCN2Q9UL51 889 aa7.5□□□□□ -1.21
SDCBP-205ENST00000447267 TRIOBPQ9H2D6 2365 aa7.5□□□□□ -1.21
SDCBP-205ENST00000447267 USP54Q70EL1 1684 aa7.5□□□□□ -1.21
SDCBP-205ENST00000447267 WNK3Q9BYP7 1800 aa7.5□□□□□ -1.21
SDCBP-205ENST00000447267 COL6A3P12111 3177 aa7.49□□□□□ -1.21
SDCBP-205ENST00000447267 POLR3AO14802 1390 aaPredicted RBP7.49□□□□□ -1.21
SDCBP-205ENST00000447267 EIF3AQ14152 1382 aaKnown RBP7.49□□□□□ -1.21
SDCBP-205ENST00000447267 TMEM229AB2RXF0 380 aa7.49□□□□□ -1.21
SDCBP-205ENST00000447267 SOX1O00570 391 aaPredicted RBP7.49□□□□□ -1.21
SDCBP-205ENST00000447267 EPHX2P34913 555 aa7.49□□□□□ -1.21
SDCBP-205ENST00000447267 ADAMTS19Q8TE59 1207 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms