RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 RAB11FIP3O75154 756 aa21.21■□□□□ 0.99
LIME1-202ENST00000444951 EGFRP00533 1210 aa21.21■□□□□ 0.99
LIME1-202ENST00000444951 LBX1P52954 281 aa21.21■□□□□ 0.99
LIME1-202ENST00000444951 GRM1Q13255 1194 aa21.21■□□□□ 0.99
LIME1-202ENST00000444951 RHPN1Q8TCX5 695 aa21.21■□□□□ 0.99
LIME1-202ENST00000444951 GCC1Q96CN9 775 aa21.21■□□□□ 0.99
LIME1-202ENST00000444951 PRDM10Q9NQV6 1147 aa21.21■□□□□ 0.99
LIME1-202ENST00000444951 ZBTB47Q9UFB7 747 aaPredicted RBP21.21■□□□□ 0.99
LIME1-202ENST00000444951 XDHP47989 1333 aa21.21■□□□□ 0.99
LIME1-202ENST00000444951 UFL1O94874 794 aa21.2■□□□□ 0.98
LIME1-202ENST00000444951 CELF2O95319 508 aaKnown RBP21.2■□□□□ 0.98
LIME1-202ENST00000444951 HSPA8P11142 646 aaKnown RBP21.2■□□□□ 0.98
LIME1-202ENST00000444951 ANKRD45Q5TZF3 282 aa21.2■□□□□ 0.98
LIME1-202ENST00000444951 PAXIP1Q6ZW49 1069 aaPredicted RBP21.2■□□□□ 0.98
LIME1-202ENST00000444951 SAMD7Q7Z3H4 446 aa21.2■□□□□ 0.98
LIME1-202ENST00000444951 KIF1BPQ96EK5 621 aa21.2■□□□□ 0.98
LIME1-202ENST00000444951 LRRCC1Q9C099 1032 aa21.2■□□□□ 0.98
LIME1-202ENST00000444951 PDE8BO95263 885 aa21.19■□□□□ 0.98
LIME1-202ENST00000444951 VGLL2Q8N8G2 317 aa21.19■□□□□ 0.98
LIME1-202ENST00000444951 GGA1Q9UJY5 639 aa21.19■□□□□ 0.98
LIME1-202ENST00000444951 POLR2AP24928 1970 aaKnown RBP21.19■□□□□ 0.98
LIME1-202ENST00000444951 A0A1B0GUL6 1792 aa21.18■□□□□ 0.98
LIME1-202ENST00000444951 AOC2O75106 756 aa21.18■□□□□ 0.98
LIME1-202ENST00000444951 ATP2B3Q16720 1220 aa21.18■□□□□ 0.98
LIME1-202ENST00000444951 TBC1D10BQ4KMP7 808 aaPredicted RBP21.18■□□□□ 0.98
LIME1-202ENST00000444951 SMC5Q8IY18 1101 aa21.18■□□□□ 0.98
LIME1-202ENST00000444951 NEUROD6Q96NK8 337 aa21.18■□□□□ 0.98
LIME1-202ENST00000444951 PODXL2Q9NZ53 605 aa21.18■□□□□ 0.98
LIME1-202ENST00000444951 H7C1D1 291 aa21.17■□□□□ 0.98
LIME1-202ENST00000444951 ATP2B4P23634 1241 aa21.17■□□□□ 0.98
LIME1-202ENST00000444951 PUM3Q15397 648 aaKnown RBP21.17■□□□□ 0.98
LIME1-202ENST00000444951 SAPCD2Q86UD0 394 aa21.17■□□□□ 0.98
LIME1-202ENST00000444951 ZC3H15Q8WU90 426 aaKnown RBP21.17■□□□□ 0.98
LIME1-202ENST00000444951 DPF2Q92785 391 aa21.17■□□□□ 0.98
LIME1-202ENST00000444951 EYA3Q99504 573 aa21.17■□□□□ 0.98
LIME1-202ENST00000444951 ZNF408Q9H9D4 720 aa21.17■□□□□ 0.98
LIME1-202ENST00000444951 ZNF804BA4D1E1 1349 aa21.17■□□□□ 0.98
LIME1-202ENST00000444951 TIMM10P62072 90 aa21.16■□□□□ 0.98
LIME1-202ENST00000444951 MAP2K1Q02750 393 aaPredicted RBP21.16■□□□□ 0.98
LIME1-202ENST00000444951 CENPQQ7L2Z9 268 aaPredicted RBP21.16■□□□□ 0.98
LIME1-202ENST00000444951 USP48Q86UV5 1035 aa21.16■□□□□ 0.98
LIME1-202ENST00000444951 AACSQ86V21 672 aa21.16■□□□□ 0.98
LIME1-202ENST00000444951 AKAP2Q9Y2D5 859 aa21.16■□□□□ 0.98
LIME1-202ENST00000444951 A0A1B0GUL7 405 aa21.15■□□□□ 0.98
LIME1-202ENST00000444951 SLC5A1P13866 664 aa21.15■□□□□ 0.98
LIME1-202ENST00000444951 KLRK1P26718 216 aa21.15■□□□□ 0.98
LIME1-202ENST00000444951 ECE1P42892 770 aa21.15■□□□□ 0.98
LIME1-202ENST00000444951 TNNI3KQ59H18 835 aa21.15■□□□□ 0.98
LIME1-202ENST00000444951 CLASRPQ8N2M8 674 aaKnown RBP21.15■□□□□ 0.98
LIME1-202ENST00000444951 LNPKQ9C0E8 428 aa21.15■□□□□ 0.98
LIME1-202ENST00000444951 CCDC8Q9H0W5 538 aaPredicted RBP21.15■□□□□ 0.98
LIME1-202ENST00000444951 LEMD3Q9Y2U8 911 aa21.15■□□□□ 0.98
LIME1-202ENST00000444951 FPGT-TNNI3KV9GXZ4 949 aa21.15■□□□□ 0.98
LIME1-202ENST00000444951 PSME4Q14997 1843 aa21.14■□□□□ 0.97
LIME1-202ENST00000444951 IFIT1P09914 478 aaKnown RBP21.14■□□□□ 0.97
LIME1-202ENST00000444951 UBE4AQ14139 1066 aa21.14■□□□□ 0.97
LIME1-202ENST00000444951 CDC37L1Q7L3B6 337 aa21.14■□□□□ 0.97
LIME1-202ENST00000444951 EAF2Q96CJ1 260 aaPredicted RBP21.14■□□□□ 0.97
LIME1-202ENST00000444951 ZNF609O15014 1411 aa21.13■□□□□ 0.97
LIME1-202ENST00000444951 ASTN2O75129 1339 aaPredicted RBP21.13■□□□□ 0.97
LIME1-202ENST00000444951 IFIT2P09913 472 aaKnown RBP21.13■□□□□ 0.97
LIME1-202ENST00000444951 FGFR2P21802 821 aa21.13■□□□□ 0.97
LIME1-202ENST00000444951 ADORA1P30542 326 aa21.13■□□□□ 0.97
LIME1-202ENST00000444951 GORABQ5T7V8 394 aa21.13■□□□□ 0.97
LIME1-202ENST00000444951 RBM26Q5T8P6 1007 aaKnown RBP21.13■□□□□ 0.97
LIME1-202ENST00000444951 LPIN2Q92539 896 aa21.13■□□□□ 0.97
LIME1-202ENST00000444951 ZC3H12CQ9C0D7 883 aaKnown RBP21.13■□□□□ 0.97
LIME1-202ENST00000444951 ADM5C9JUS6 153 aa21.12■□□□□ 0.97
LIME1-202ENST00000444951 VIL1P09327 827 aaKnown RBP21.12■□□□□ 0.97
LIME1-202ENST00000444951 RPS12P25398 132 aaKnown RBP21.12■□□□□ 0.97
LIME1-202ENST00000444951 NUCB1Q02818 461 aa21.12■□□□□ 0.97
LIME1-202ENST00000444951 CHD1LQ86WJ1 897 aa21.12■□□□□ 0.97
LIME1-202ENST00000444951 GPR108Q9NPR9 543 aa21.12■□□□□ 0.97
LIME1-202ENST00000444951 TLR7Q9NYK1 1049 aaKnown RBP21.12■□□□□ 0.97
LIME1-202ENST00000444951 TSKSQ9UJT2 592 aa21.12■□□□□ 0.97
LIME1-202ENST00000444951 GYG1P46976 350 aa21.11■□□□□ 0.97
LIME1-202ENST00000444951 TXNRD3Q86VQ6 643 aa21.11■□□□□ 0.97
LIME1-202ENST00000444951 XAGE2Q96GT9 111 aa21.11■□□□□ 0.97
LIME1-202ENST00000444951 DBNDD2Q9BQY9 259 aa21.11■□□□□ 0.97
LIME1-202ENST00000444951 G3V3G9 751 aa21.1■□□□□ 0.97
LIME1-202ENST00000444951 KIF4BQ2VIQ3 1234 aa21.1■□□□□ 0.97
LIME1-202ENST00000444951 DCAF8Q5TAQ9 597 aa21.1■□□□□ 0.97
LIME1-202ENST00000444951 KRT26Q7Z3Y9 468 aa21.1■□□□□ 0.97
LIME1-202ENST00000444951 ZIC5Q96T25 663 aa21.1■□□□□ 0.97
LIME1-202ENST00000444951 ZNF646O15015 1829 aaPredicted RBP21.1■□□□□ 0.97
LIME1-202ENST00000444951 VPS37DQ86XT2 251 aa21.09■□□□□ 0.97
LIME1-202ENST00000444951 OTUD7AQ8TE49 926 aaPredicted RBP21.09■□□□□ 0.97
LIME1-202ENST00000444951 HHIPL1Q96JK4 782 aa21.09■□□□□ 0.97
LIME1-202ENST00000444951 DBNLQ9UJU6 430 aaKnown RBP21.09■□□□□ 0.97
LIME1-202ENST00000444951 MAP2K2P36507 400 aa21.08■□□□□ 0.97
LIME1-202ENST00000444951 BCAMP50895 628 aa21.08■□□□□ 0.97
LIME1-202ENST00000444951 CAVIN4Q5BKX8 364 aa21.08■□□□□ 0.97
LIME1-202ENST00000444951 RSBN1LQ6PCB5 846 aaPredicted RBP21.08■□□□□ 0.97
LIME1-202ENST00000444951 SKAP1Q86WV1 359 aa21.08■□□□□ 0.97
LIME1-202ENST00000444951 GGA3Q9NZ52 723 aa21.08■□□□□ 0.97
LIME1-202ENST00000444951 MED23Q9ULK4 1368 aa21.08■□□□□ 0.96
LIME1-202ENST00000444951 FAM84BQ96KN1 310 aaPredicted RBP21.07■□□□□ 0.96
LIME1-202ENST00000444951 GMLQ99445 158 aa21.07■□□□□ 0.96
LIME1-202ENST00000444951 IQSEC3Q9UPP2 1182 aaPredicted RBP21.07■□□□□ 0.96
LIME1-202ENST00000444951 HIBADHP31937 336 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms