RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 CDK11BP21127 795 aaKnown RBP10.98□□□□□ -0.65
USP6NL-203ENST00000443016 NBPF9Q3BBW0 867 aa10.98□□□□□ -0.65
USP6NL-203ENST00000443016 HHIPL1Q96JK4 782 aa10.98□□□□□ -0.65
USP6NL-203ENST00000443016 ZNF609O15014 1411 aa10.97□□□□□ -0.65
USP6NL-203ENST00000443016 AOC2O75106 756 aa10.97□□□□□ -0.65
USP6NL-203ENST00000443016 MAP2K2P36507 400 aa10.97□□□□□ -0.65
USP6NL-203ENST00000443016 KAZALD1Q96I82 304 aa10.97□□□□□ -0.65
USP6NL-203ENST00000443016 UTYO14607 1347 aa10.97□□□□□ -0.65
USP6NL-203ENST00000443016 LBX1P52954 281 aa10.97□□□□□ -0.65
USP6NL-203ENST00000443016 VPS37DQ86XT2 251 aa10.97□□□□□ -0.65
USP6NL-203ENST00000443016 TRMT2AQ8IZ69 625 aaKnown RBP10.97□□□□□ -0.65
USP6NL-203ENST00000443016 CDCA5Q96FF9 252 aa10.97□□□□□ -0.65
USP6NL-203ENST00000443016 PUS3Q9BZE2 481 aaKnown RBP10.97□□□□□ -0.65
USP6NL-203ENST00000443016 USP44Q9H0E7 712 aa10.97□□□□□ -0.65
USP6NL-203ENST00000443016 SCAF8Q9UPN6 1271 aaKnown RBP10.97□□□□□ -0.65
USP6NL-203ENST00000443016 WNT10BO00744 389 aa10.96□□□□□ -0.65
USP6NL-203ENST00000443016 SASH1O94885 1247 aa10.96□□□□□ -0.65
USP6NL-203ENST00000443016 MMP14P50281 582 aa10.96□□□□□ -0.65
USP6NL-203ENST00000443016 DHX37Q8IY37 1157 aaKnown RBP10.96□□□□□ -0.65
USP6NL-203ENST00000443016 NOB1Q9ULX3 412 aaKnown RBP10.96□□□□□ -0.65
USP6NL-203ENST00000443016 JAG2Q9Y219 1238 aa10.96□□□□□ -0.65
USP6NL-203ENST00000443016 MROH5Q6ZUA9 1318 aa10.96□□□□□ -0.65
USP6NL-203ENST00000443016 F8W031 263 aaPredicted RBP10.96□□□□□ -0.66
USP6NL-203ENST00000443016 CAPN15O75808 1086 aa10.96□□□□□ -0.66
USP6NL-203ENST00000443016 ZNF157P51786 506 aaPredicted RBP10.96□□□□□ -0.66
USP6NL-203ENST00000443016 NOGQ13253 232 aa10.96□□□□□ -0.66
USP6NL-203ENST00000443016 UBE4AQ14139 1066 aa10.96□□□□□ -0.66
USP6NL-203ENST00000443016 METTL24Q5JXM2 366 aa10.96□□□□□ -0.66
USP6NL-203ENST00000443016 C15orf52Q6ZUT6 534 aaKnown RBP10.96□□□□□ -0.66
USP6NL-203ENST00000443016 PITPNM2Q9BZ72 1349 aa10.96□□□□□ -0.66
USP6NL-203ENST00000443016 POLR2AP24928 1970 aaKnown RBP10.95□□□□□ -0.66
USP6NL-203ENST00000443016 FRAT2O75474 233 aaPredicted RBP10.95□□□□□ -0.66
USP6NL-203ENST00000443016 RABL6Q3YEC7 729 aaPredicted RBP10.95□□□□□ -0.66
USP6NL-203ENST00000443016 RGMBQ6NW40 437 aa10.95□□□□□ -0.66
USP6NL-203ENST00000443016 API5Q9BZZ5 524 aaKnown RBP10.95□□□□□ -0.66
USP6NL-203ENST00000443016 UBTFL1P0CB47 393 aaPredicted RBP10.95□□□□□ -0.66
USP6NL-203ENST00000443016 IL1R1P14778 569 aa10.95□□□□□ -0.66
USP6NL-203ENST00000443016 HIBADHP31937 336 aaKnown RBP10.95□□□□□ -0.66
USP6NL-203ENST00000443016 NF2P35240 595 aa10.95□□□□□ -0.66
USP6NL-203ENST00000443016 GYG1P46976 350 aa10.95□□□□□ -0.66
USP6NL-203ENST00000443016 TTLL12Q14166 644 aaPredicted RBP10.95□□□□□ -0.66
USP6NL-203ENST00000443016 DLGAP5Q15398 846 aa10.95□□□□□ -0.66
USP6NL-203ENST00000443016 KLHDC4Q8TBB5 520 aa10.95□□□□□ -0.66
USP6NL-203ENST00000443016 PRDM10Q9NQV6 1147 aa10.95□□□□□ -0.66
USP6NL-203ENST00000443016 RBM5P52756 815 aaKnown RBP eCLIP10.94□□□□□ -0.66
USP6NL-203ENST00000443016 LRRC24Q50LG9 513 aa10.94□□□□□ -0.66
USP6NL-203ENST00000443016 PRAMEF18Q5VWM3 479 aa10.94□□□□□ -0.66
USP6NL-203ENST00000443016 ANKRD44Q8N8A2 993 aa10.94□□□□□ -0.66
USP6NL-203ENST00000443016 CCDC102AQ96A19 550 aa10.94□□□□□ -0.66
USP6NL-203ENST00000443016 RIPOR2Q9Y4F9 1068 aa10.94□□□□□ -0.66
USP6NL-203ENST00000443016 PSME4Q14997 1843 aa10.94□□□□□ -0.66
USP6NL-203ENST00000443016 MYO1BO43795 1136 aa10.94□□□□□ -0.66
USP6NL-203ENST00000443016 CAVIN4Q5BKX8 364 aa10.94□□□□□ -0.66
USP6NL-203ENST00000443016 HDAC5Q9UQL6 1122 aa10.94□□□□□ -0.66
USP6NL-203ENST00000443016 IRS2Q9Y4H2 1338 aa10.94□□□□□ -0.66
USP6NL-203ENST00000443016 RARSP54136 660 aaKnown RBP10.93□□□□□ -0.66
USP6NL-203ENST00000443016 CERS5Q8N5B7 392 aa10.93□□□□□ -0.66
USP6NL-203ENST00000443016 TSKSQ9UJT2 592 aa10.93□□□□□ -0.66
USP6NL-203ENST00000443016 KIF16BQ96L93 1317 aa10.93□□□□□ -0.66
USP6NL-203ENST00000443016 CA12O43570 354 aa10.93□□□□□ -0.66
USP6NL-203ENST00000443016 HSPA8P11142 646 aaKnown RBP10.93□□□□□ -0.66
USP6NL-203ENST00000443016 FKBP1BP68106 108 aa10.93□□□□□ -0.66
USP6NL-203ENST00000443016 MFSD14BQ5SR56 506 aa10.93□□□□□ -0.66
USP6NL-203ENST00000443016 APOBEC3FQ8IUX4 373 aaKnown RBP10.93□□□□□ -0.66
USP6NL-203ENST00000443016 FAM84BQ96KN1 310 aaPredicted RBP10.93□□□□□ -0.66
USP6NL-203ENST00000443016 PDE8BO95263 885 aa10.92□□□□□ -0.66
USP6NL-203ENST00000443016 FRAT1Q92837 279 aaPredicted RBP10.92□□□□□ -0.66
USP6NL-203ENST00000443016 IQSEC3Q9UPP2 1182 aaPredicted RBP10.92□□□□□ -0.66
USP6NL-203ENST00000443016 CFAP100Q494V2 611 aa10.92□□□□□ -0.66
USP6NL-203ENST00000443016 TDRD7Q8NHU6 1098 aaKnown RBP10.92□□□□□ -0.66
USP6NL-203ENST00000443016 ZIC5Q96T25 663 aa10.92□□□□□ -0.66
USP6NL-203ENST00000443016 VEZTQ9HBM0 779 aa10.92□□□□□ -0.66
USP6NL-203ENST00000443016 IPO8O15397 1037 aaKnown RBP10.91□□□□□ -0.66
USP6NL-203ENST00000443016 IFIT1P09914 478 aaKnown RBP10.91□□□□□ -0.66
USP6NL-203ENST00000443016 FKBP1AP62942 108 aaKnown RBP10.91□□□□□ -0.66
USP6NL-203ENST00000443016 CHAF1AQ13111 956 aaPredicted RBP10.91□□□□□ -0.66
USP6NL-203ENST00000443016 PRKG1Q13976 671 aa10.91□□□□□ -0.66
USP6NL-203ENST00000443016 SIL1Q9H173 461 aa10.91□□□□□ -0.66
USP6NL-203ENST00000443016 TTF2Q9UNY4 1162 aaKnown RBP10.91□□□□□ -0.66
USP6NL-203ENST00000443016 CLRN2A0PK11 232 aa10.91□□□□□ -0.66
USP6NL-203ENST00000443016 UBE2Q2LH0YL09 131 aa10.91□□□□□ -0.66
USP6NL-203ENST00000443016 EYA2O00167 538 aa10.91□□□□□ -0.66
USP6NL-203ENST00000443016 PDIA4P13667 645 aaKnown RBP10.91□□□□□ -0.66
USP6NL-203ENST00000443016 PUM3Q15397 648 aaKnown RBP10.91□□□□□ -0.66
USP6NL-203ENST00000443016 MOB2Q70IA6 237 aa10.91□□□□□ -0.66
USP6NL-203ENST00000443016 DEFB129Q9H1M3 183 aa10.91□□□□□ -0.66
USP6NL-203ENST00000443016 LRRFIP2Q9Y608 721 aaKnown RBP10.91□□□□□ -0.66
USP6NL-203ENST00000443016 FAM205AQ6ZU69 1335 aa10.9□□□□□ -0.66
USP6NL-203ENST00000443016 KIF23Q02241 960 aaPredicted RBP10.9□□□□□ -0.66
USP6NL-203ENST00000443016 ARHGAP45Q92619 1136 aa10.9□□□□□ -0.66
USP6NL-203ENST00000443016 SPDYE2BA6NHP3 402 aa10.9□□□□□ -0.67
USP6NL-203ENST00000443016 FAM155AB1AL88 458 aaPredicted RBP10.9□□□□□ -0.67
USP6NL-203ENST00000443016 SPDYE6P0CI01 402 aa10.9□□□□□ -0.67
USP6NL-203ENST00000443016 PTPN12Q05209 780 aaKnown RBP10.9□□□□□ -0.67
USP6NL-203ENST00000443016 ARMC9Q7Z3E5 817 aa10.9□□□□□ -0.67
USP6NL-203ENST00000443016 MTMR14Q8NCE2 650 aa10.9□□□□□ -0.67
USP6NL-203ENST00000443016 PRMT6Q96LA8 375 aaPredicted RBP10.9□□□□□ -0.67
USP6NL-203ENST00000443016 PCDHAC2Q9Y5I4 1007 aa10.9□□□□□ -0.67
USP6NL-203ENST00000443016 SLC10A3P09131 477 aa10.89□□□□□ -0.67
USP6NL-203ENST00000443016 BCAMP50895 628 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms