RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 VDRP11473 427 aa7.17□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 CD53P19397 219 aa7.17□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 TMEM260Q9NX78 707 aa7.17□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 CFAP43Q8NDM7 1665 aa7.17□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 PCF11O94913 1555 aaKnown RBP7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 VARSP26640 1264 aaKnown RBP7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 GSTT1P30711 240 aa7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 ARID5BQ14865 1188 aa7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 CCDC85BQ15834 202 aaPredicted RBP7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 HSP90AB3PQ58FF7 597 aa7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 TNNI3KQ59H18 835 aa7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 CNKSR1Q969H4 720 aa7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 XAGE2Q96GT9 111 aa7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 CEP63Q96MT8 703 aa7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 TMEM74Q96NL1 305 aa7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 NT5C1AQ9BXI3 368 aa7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 ZFYVE28Q9HCC9 887 aa7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 FCF1Q9Y324 198 aaKnown RBP7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 FYCO1Q9BQS8 1478 aa7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 DHX57Q6P158 1386 aaKnown RBP7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 TCERG1O14776 1098 aaKnown RBP7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 CCDC184Q52MB2 194 aa7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 ZDHHC1Q8WTX9 485 aa7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 IL17RAQ96F46 866 aa7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 CARD10Q9BWT7 1032 aa7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 MSRB2Q9Y3D2 182 aa7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 PARP3Q9Y6F1 533 aa7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 AQRO60306 1485 aaKnown RBP eCLIP7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 FHOD3Q2V2M9 1422 aa7.16□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 FSHRP23945 695 aa7.15□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 MAN1A1P33908 653 aa7.15□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 ZNF438Q7Z4V0 828 aa7.15□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 C8orf48Q96LL4 319 aa7.15□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 SRRTQ9BXP5 876 aaKnown RBP7.15□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 WBP1LQ9NX94 342 aa7.15□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 PPP4R2Q9NY27 417 aa7.15□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 FNDC3AQ9Y2H6 1198 aaKnown RBP7.15□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 FMN1Q68DA7 1419 aa7.15□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 CASKIN1Q8WXD9 1431 aa7.15□□□□□ -1.26
ALMS1-IT1-201ENST00000441587 PHACTR2O75167 634 aa7.15□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 IL2RAP01589 272 aa7.15□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 FAM200BP0CF97 657 aa7.15□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 DHX8Q14562 1220 aaKnown RBP7.15□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 ZRSR2Q15696 482 aaKnown RBP7.15□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 L1TD1Q5T7N2 865 aaKnown RBP7.15□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 CCDC174Q6PII3 467 aa7.15□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 XKR5Q6UX68 686 aa7.15□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 SMAD7O15105 426 aaKnown RBP7.14□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 PDPK1O15530 556 aa7.14□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 LILRA1O75019 489 aa7.14□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 MICAL2O94851 1124 aa7.14□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 RLBP1P12271 317 aa7.14□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 PCNX4Q63HM2 1172 aa7.14□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 FBXL19Q6PCT2 694 aa7.14□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 DRC7Q8IY82 874 aa7.14□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 PGBD3Q8N328 593 aa7.14□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 TTC30BQ8N4P2 665 aa7.14□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 EMID1Q96A84 441 aaPredicted RBP7.14□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 CDC5LQ99459 802 aaKnown RBP7.14□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 ESYT1Q9BSJ8 1104 aa7.14□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 ZHX3Q9H4I2 956 aa7.14□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 PUF60Q9UHX1 559 aaKnown RBP7.14□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 EID1Q9Y6B2 187 aa7.14□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 TARBP1Q13395 1621 aaKnown RBP7.14□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 BICDL2A1A5D9 508 aa7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 POTECB2RU33 542 aa7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 MTA1Q13330 715 aa7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 PAF1Q8N7H5 531 aa7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 CELF2-AS1Q8N7Q2 184 aa7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 ENOX1Q8TC92 643 aaKnown RBP7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 WNT2BQ93097 391 aa7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 ZNF512BQ96KM6 892 aaPredicted RBP7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 NEUROD6Q96NK8 337 aa7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 TRIM56Q9BRZ2 755 aaKnown RBP7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 ST7Q9NRC1 585 aa7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 CNTN3Q9P232 1028 aa7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 VIL1P09327 827 aaKnown RBP7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 SSR1P43307 286 aaKnown RBP7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 EXOSC10Q01780 885 aaKnown RBP7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 SQSTM1Q13501 440 aa7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 DDR2Q16832 855 aa7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 PDE12Q6L8Q7 609 aaKnown RBP7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 ADGRD1Q6QNK2 874 aa7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 RPAINQ86UA6 219 aa7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 NBPF5PQ86XG9 351 aaPredicted RBP7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 MYCBPQ99417 103 aaPredicted RBP7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 KLF15Q9UIH9 416 aa7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 PHLDB1Q86UU1 1377 aa7.13□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 CBFA2T2O43439 604 aa7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 POLR3DP05423 398 aaPredicted RBP7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 CNGA1P29973 690 aa7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 APOBRQ0VD83 1088 aa7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 RASGRF1Q13972 1273 aa7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 UBE4AQ14139 1066 aa7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 GRM2Q14416 872 aa7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 TKFCQ3LXA3 575 aa7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 C1orf53Q5VUE5 145 aa7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 EFCAB2Q5VUJ9 269 aa7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 ANKRD23Q86SG2 305 aa7.12□□□□□ -1.27
ALMS1-IT1-201ENST00000441587 SHDQ96IW2 340 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms