RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	PLCD4	Q9BRC7	762 aa		7.85	□□□□□ -1.15
ECHDC1-208	ENST00000436638	LRRC4B	Q9NT99	713 aa		7.85	□□□□□ -1.15
ECHDC1-208	ENST00000436638	DACH1	Q9UI36	760 aa		7.85	□□□□□ -1.15
ECHDC1-208	ENST00000436638	GPSM3	Q9Y4H4	160 aa		7.85	□□□□□ -1.15
ECHDC1-208	ENST00000436638	RGPD3	A6NKT7	1758 aa	Predicted RBP	7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	KDM3B	Q7LBC6	1761 aa		7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	RGPD4	Q7Z3J3	1758 aa		7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	CNTNAP4	Q9C0A0	1308 aa		7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	CYP19A1	P11511	503 aa	Predicted RBP	7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	PTMS	P20962	102 aa		7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	CANX	P27824	592 aa	Known RBP	7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	GRM5	P41594	1212 aa		7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	CRKL	P46109	303 aa	Known RBP	7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	SMCP	P49901	116 aa	Predicted RBP	7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	KRT24	Q2M2I5	525 aa		7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	CCDC30	Q5VVM6	783 aa		7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	TRMT44	Q8IYL2	757 aa	Known RBP	7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	CRIPAK	Q8N1N5	446 aa		7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	C8orf58	Q8NAV2	365 aa		7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	LINC00116	Q8NCU8	138 aa		7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	SLC10A4	Q96EP9	437 aa		7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	SLC4A9	Q96Q91	983 aa		7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	OCSTAMP	Q9BR26	566 aa		7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	STK31	Q9BXU1	1019 aa		7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	CCDC87	Q9NVE4	849 aa		7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	TFCP2L1	Q9NZI6	479 aa		7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	RTCB	Q9Y3I0	505 aa	Known RBP	7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	ZNF330	Q9Y3S2	320 aa	Predicted RBP	7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	USP16	Q9Y5T5	823 aa		7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	NDUFB9	Q9Y6M9	179 aa		7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	PAPPA	Q13219	1627 aa		7.84	□□□□□ -1.15
ECHDC1-208	ENST00000436638	LY75	O60449	1722 aa		7.83	□□□□□ -1.16
ECHDC1-208	ENST00000436638		A0A087WZG4	1122 aa		7.83	□□□□□ -1.16
ECHDC1-208	ENST00000436638	PRAMEF22	A3QJZ6	481 aa		7.83	□□□□□ -1.16
ECHDC1-208	ENST00000436638	CAPN5	O15484	640 aa	Predicted RBP	7.83	□□□□□ -1.16
ECHDC1-208	ENST00000436638	RPS6KA4	O75676	772 aa		7.83	□□□□□ -1.16
ECHDC1-208	ENST00000436638	NR5A1	Q13285	461 aa		7.83	□□□□□ -1.16
ECHDC1-208	ENST00000436638	SLC15A2	Q16348	729 aa		7.83	□□□□□ -1.16
ECHDC1-208	ENST00000436638	ZNF787	Q6DD87	383 aa		7.83	□□□□□ -1.16
ECHDC1-208	ENST00000436638	FLAD1	Q8NFF5	587 aa		7.83	□□□□□ -1.16
ECHDC1-208	ENST00000436638	CWC22	Q9HCG8	908 aa	Known RBP	7.83	□□□□□ -1.16
ECHDC1-208	ENST00000436638	ERBB4	Q15303	1308 aa		7.82	□□□□□ -1.16
ECHDC1-208	ENST00000436638	UBR2	Q8IWV8	1755 aa		7.82	□□□□□ -1.16
ECHDC1-208	ENST00000436638	A1BG	P04217	495 aa		7.82	□□□□□ -1.16
ECHDC1-208	ENST00000436638	CT47B1	P0C2W7	299 aa	Predicted RBP	7.82	□□□□□ -1.16
ECHDC1-208	ENST00000436638	MYL6B	P14649	208 aa		7.82	□□□□□ -1.16
ECHDC1-208	ENST00000436638	FSHR	P23945	695 aa		7.82	□□□□□ -1.16
ECHDC1-208	ENST00000436638	RBM25	P49756	843 aa	Known RBP	7.82	□□□□□ -1.16
ECHDC1-208	ENST00000436638	WDR4	P57081	412 aa	Known RBP	7.82	□□□□□ -1.16
ECHDC1-208	ENST00000436638	TRAPPC3L	Q5T215	181 aa		7.82	□□□□□ -1.16
ECHDC1-208	ENST00000436638	DZIP3	Q86Y13	1208 aa	Known RBP	7.82	□□□□□ -1.16
ECHDC1-208	ENST00000436638	TEX2	Q8IWB9	1127 aa		7.82	□□□□□ -1.16
ECHDC1-208	ENST00000436638	TSPYL6	Q8N831	410 aa		7.82	□□□□□ -1.16
ECHDC1-208	ENST00000436638	RGS22	Q8NE09	1264 aa		7.82	□□□□□ -1.16
ECHDC1-208	ENST00000436638	ZNF428	Q96B54	188 aa		7.82	□□□□□ -1.16
ECHDC1-208	ENST00000436638	PRM3	Q9NNZ6	103 aa		7.82	□□□□□ -1.16
ECHDC1-208	ENST00000436638	DBF4	Q9UBU7	674 aa	Predicted RBP	7.82	□□□□□ -1.16
ECHDC1-208	ENST00000436638	ZBTB1	Q9Y2K1	713 aa		7.82	□□□□□ -1.16
ECHDC1-208	ENST00000436638	ZNF831	Q5JPB2	1677 aa		7.82	□□□□□ -1.16
ECHDC1-208	ENST00000436638	ZBBX	A8MT70	800 aa		7.81	□□□□□ -1.16
ECHDC1-208	ENST00000436638	TCERG1	O14776	1098 aa	Known RBP	7.81	□□□□□ -1.16
ECHDC1-208	ENST00000436638	VAMP4	O75379	141 aa		7.81	□□□□□ -1.16
ECHDC1-208	ENST00000436638	NR3C2	P08235	984 aa		7.81	□□□□□ -1.16
ECHDC1-208	ENST00000436638	SSFA2	P28290	1259 aa		7.81	□□□□□ -1.16
ECHDC1-208	ENST00000436638	RFC4	P35249	363 aa		7.81	□□□□□ -1.16
ECHDC1-208	ENST00000436638	IL6ST	P40189	918 aa	Predicted RBP	7.81	□□□□□ -1.16
ECHDC1-208	ENST00000436638	PIP4K2A	P48426	406 aa	Predicted RBP	7.81	□□□□□ -1.16
ECHDC1-208	ENST00000436638	ZNF827	Q17R98	1081 aa		7.81	□□□□□ -1.16
ECHDC1-208	ENST00000436638	INTS5	Q6P9B9	1019 aa	Known RBP	7.81	□□□□□ -1.16
ECHDC1-208	ENST00000436638	TMED8	Q6PL24	325 aa	Predicted RBP	7.81	□□□□□ -1.16
ECHDC1-208	ENST00000436638	KIF6	Q6ZMV9	814 aa		7.81	□□□□□ -1.16
ECHDC1-208	ENST00000436638	TRMT2A	Q8IZ69	625 aa	Known RBP	7.81	□□□□□ -1.16
ECHDC1-208	ENST00000436638	FAM177A1	Q8N128	213 aa	Predicted RBP	7.81	□□□□□ -1.16
ECHDC1-208	ENST00000436638	KCTD15	Q96SI1	283 aa	Predicted RBP	7.81	□□□□□ -1.16
ECHDC1-208	ENST00000436638	DDX21	Q9NR30	783 aa	Known RBP eCLIP	7.81	□□□□□ -1.16
ECHDC1-208	ENST00000436638	HYPK	Q9NX55	129 aa		7.81	□□□□□ -1.16
ECHDC1-208	ENST00000436638	MAP4K5	Q9Y4K4	846 aa		7.81	□□□□□ -1.16
ECHDC1-208	ENST00000436638	C4B	P0C0L5	1744 aa		7.81	□□□□□ -1.16
ECHDC1-208	ENST00000436638	C5	P01031	1676 aa		7.8	□□□□□ -1.16
ECHDC1-208	ENST00000436638	RREB1	Q92766	1687 aa		7.8	□□□□□ -1.16
ECHDC1-208	ENST00000436638	POTEC	B2RU33	542 aa		7.8	□□□□□ -1.16
ECHDC1-208	ENST00000436638	FBXO45	P0C2W1	286 aa		7.8	□□□□□ -1.16
ECHDC1-208	ENST00000436638	AIMP1	Q12904	312 aa	Known RBP	7.8	□□□□□ -1.16
ECHDC1-208	ENST00000436638	R3HDM1	Q15032	1099 aa	Known RBP	7.8	□□□□□ -1.16
ECHDC1-208	ENST00000436638	CHPF2	Q9P2E5	772 aa		7.8	□□□□□ -1.16
ECHDC1-208	ENST00000436638	CDV3	Q9UKY7	258 aa	Known RBP	7.8	□□□□□ -1.16
ECHDC1-208	ENST00000436638	TJP1	Q07157	1748 aa		7.8	□□□□□ -1.16
ECHDC1-208	ENST00000436638	NUP188	Q5SRE5	1749 aa		7.79	□□□□□ -1.16
ECHDC1-208	ENST00000436638	ZIC2	O95409	532 aa	Predicted RBP	7.79	□□□□□ -1.16
ECHDC1-208	ENST00000436638	DDX58	O95786	925 aa	Known RBP	7.79	□□□□□ -1.16
ECHDC1-208	ENST00000436638	ANXA1	P04083	346 aa		7.79	□□□□□ -1.16
ECHDC1-208	ENST00000436638	EIF5	P55010	431 aa	Known RBP	7.79	□□□□□ -1.16
ECHDC1-208	ENST00000436638	RAB15	P59190	212 aa		7.79	□□□□□ -1.16
ECHDC1-208	ENST00000436638	ALDH1L2	Q3SY69	923 aa		7.79	□□□□□ -1.16
ECHDC1-208	ENST00000436638	ATP13A2	Q9NQ11	1180 aa		7.79	□□□□□ -1.16
ECHDC1-208	ENST00000436638	SMC4	Q9NTJ3	1288 aa		7.79	□□□□□ -1.16
ECHDC1-208	ENST00000436638	TBC1D2B	Q9UPU7	963 aa		7.79	□□□□□ -1.16
ECHDC1-208	ENST00000436638	MTMR7	Q9Y216	660 aa		7.79	□□□□□ -1.16
ECHDC1-208	ENST00000436638	ZNF652	Q9Y2D9	606 aa		7.79	□□□□□ -1.16
ECHDC1-208	ENST00000436638	PCDHB9	Q9Y5E1	797 aa		7.79	□□□□□ -1.16

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