RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 ZFYP08048 801 aaPredicted RBP13.81□□□□□ -0.2
CD44-209ENST00000433892 EVCP57679 992 aa13.81□□□□□ -0.2
CD44-209ENST00000433892 CHAF1AQ13111 956 aaPredicted RBP13.81□□□□□ -0.2
CD44-209ENST00000433892 IFIT5Q13325 482 aaKnown RBP13.81□□□□□ -0.2
CD44-209ENST00000433892 STX1AQ16623 288 aa13.81□□□□□ -0.2
CD44-209ENST00000433892 ZNF710Q8N1W2 664 aa13.81□□□□□ -0.2
CD44-209ENST00000433892 CARD10Q9BWT7 1032 aa13.81□□□□□ -0.2
CD44-209ENST00000433892 TMOD3Q9NYL9 352 aa13.81□□□□□ -0.2
CD44-209ENST00000433892 TNS2Q63HR2 1409 aa13.8□□□□□ -0.2
CD44-209ENST00000433892 KLF18A0A0U1RQI7 1052 aa13.8□□□□□ -0.2
CD44-209ENST00000433892 GOLGA8BA8MQT2 603 aa13.8□□□□□ -0.2
CD44-209ENST00000433892 PCCAP05165 728 aaPredicted RBP13.8□□□□□ -0.2
CD44-209ENST00000433892 POLR3DP05423 398 aaPredicted RBP13.8□□□□□ -0.2
CD44-209ENST00000433892 CCDC144BQ3MJ40 725 aa13.8□□□□□ -0.2
CD44-209ENST00000433892 DNAJC10Q8IXB1 793 aa13.8□□□□□ -0.2
CD44-209ENST00000433892 CCDC144CPQ8IYA2 1237 aa13.8□□□□□ -0.2
CD44-209ENST00000433892 FBXL16Q8N461 479 aa13.8□□□□□ -0.2
CD44-209ENST00000433892 ASAP1Q9ULH1 1129 aa13.8□□□□□ -0.2
CD44-209ENST00000433892 PCDHA7Q9UN72 937 aa13.8□□□□□ -0.2
CD44-209ENST00000433892 MYH15Q9Y2K3 1946 aa13.8□□□□□ -0.2
CD44-209ENST00000433892 RIOK3O14730 519 aaKnown RBP13.8□□□□□ -0.2
CD44-209ENST00000433892 KIF6Q6ZMV9 814 aa13.8□□□□□ -0.2
CD44-209ENST00000433892 CACTINQ8WUQ7 758 aaKnown RBP13.8□□□□□ -0.2
CD44-209ENST00000433892 APPBP2Q92624 585 aa13.8□□□□□ -0.2
CD44-209ENST00000433892 FBXW7Q969H0 707 aa13.8□□□□□ -0.2
CD44-209ENST00000433892 CHMP4CQ96CF2 233 aa13.8□□□□□ -0.2
CD44-209ENST00000433892 GJB4Q9NTQ9 266 aa13.8□□□□□ -0.2
CD44-209ENST00000433892 SPEF2Q9C093 1822 aa13.8□□□□□ -0.2
CD44-209ENST00000433892 BECN2A8MW95 431 aa13.79□□□□□ -0.2
CD44-209ENST00000433892 GPAA1O43292 621 aa13.79□□□□□ -0.2
CD44-209ENST00000433892 CSF1RP07333 972 aa13.79□□□□□ -0.2
CD44-209ENST00000433892 GPTP24298 496 aa13.79□□□□□ -0.2
CD44-209ENST00000433892 EVA1CP58658 441 aa13.79□□□□□ -0.2
CD44-209ENST00000433892 TRIM28Q13263 835 aaKnown RBP13.79□□□□□ -0.2
CD44-209ENST00000433892 MB21D2Q8IYB1 491 aaPredicted RBP13.79□□□□□ -0.2
CD44-209ENST00000433892 ZBTB38Q8NAP3 1195 aaPredicted RBP13.79□□□□□ -0.2
CD44-209ENST00000433892 C8orf76Q96K31 380 aa13.79□□□□□ -0.2
CD44-209ENST00000433892 FBXO3Q9UK99 471 aa13.79□□□□□ -0.2
CD44-209ENST00000433892 HPS5Q9UPZ3 1129 aa13.79□□□□□ -0.2
CD44-209ENST00000433892 NWD2Q9ULI1 1742 aa13.79□□□□□ -0.2
CD44-209ENST00000433892 A0A1B0GVL5 298 aa13.79□□□□□ -0.2
CD44-209ENST00000433892 ZNF213O14771 459 aa13.79□□□□□ -0.2
CD44-209ENST00000433892 HSPA2P54652 639 aa13.79□□□□□ -0.2
CD44-209ENST00000433892 ANTXR2P58335 489 aa13.79□□□□□ -0.2
CD44-209ENST00000433892 ATP2B3Q16720 1220 aa13.79□□□□□ -0.2
CD44-209ENST00000433892 METTL24Q5JXM2 366 aa13.79□□□□□ -0.2
CD44-209ENST00000433892 RALYLQ86SE5 291 aaKnown RBP13.79□□□□□ -0.2
CD44-209ENST00000433892 MRPS27Q92552 414 aaKnown RBP13.79□□□□□ -0.2
CD44-209ENST00000433892 C16orf45Q96MC5 204 aaPredicted RBP13.79□□□□□ -0.2
CD44-209ENST00000433892 RTEL1Q9NZ71 1219 aa13.79□□□□□ -0.2
CD44-209ENST00000433892 ORC3Q9UBD5 711 aaPredicted RBP13.79□□□□□ -0.2
CD44-209ENST00000433892 CLIC4Q9Y696 253 aa13.79□□□□□ -0.2
CD44-209ENST00000433892 PAPPAQ13219 1627 aa13.79□□□□□ -0.2
CD44-209ENST00000433892 MCAMP43121 646 aa13.78□□□□□ -0.2
CD44-209ENST00000433892 SF3A1Q15459 793 aaKnown RBP13.78□□□□□ -0.2
CD44-209ENST00000433892 SARM1Q6SZW1 724 aa13.78□□□□□ -0.2
CD44-209ENST00000433892 LDHAL6AQ6ZMR3 332 aa13.78□□□□□ -0.2
CD44-209ENST00000433892 DHX40Q8IX18 779 aaKnown RBP13.78□□□□□ -0.2
CD44-209ENST00000433892 FMR1NBQ8N0W7 255 aaPredicted RBP13.78□□□□□ -0.2
CD44-209ENST00000433892 NCOA7Q8NI08 942 aa13.78□□□□□ -0.2
CD44-209ENST00000433892 SDF4Q9BRK5 362 aa13.78□□□□□ -0.2
CD44-209ENST00000433892 ANO10Q9NW15 660 aa13.78□□□□□ -0.2
CD44-209ENST00000433892 CPLX1O14810 134 aa13.78□□□□□ -0.2
CD44-209ENST00000433892 DHX16O60231 1041 aaKnown RBP13.78□□□□□ -0.2
CD44-209ENST00000433892 CDC25BP30305 580 aa13.78□□□□□ -0.2
CD44-209ENST00000433892 NDUFA8P51970 172 aa13.78□□□□□ -0.2
CD44-209ENST00000433892 HLFQ16534 295 aa13.78□□□□□ -0.2
CD44-209ENST00000433892 ADALQ6DHV7 355 aa13.78□□□□□ -0.2
CD44-209ENST00000433892 LINC00301Q8NCQ3 95 aa13.78□□□□□ -0.2
CD44-209ENST00000433892 FBXO18Q8NFZ0 1043 aa13.78□□□□□ -0.2
CD44-209ENST00000433892 PIGBQ92521 554 aa13.78□□□□□ -0.2
CD44-209ENST00000433892 PLA2G12BQ9BX93 195 aa13.78□□□□□ -0.2
CD44-209ENST00000433892 GREM2Q9H772 168 aa13.78□□□□□ -0.2
CD44-209ENST00000433892 BCL2L12Q9HB09 334 aa13.78□□□□□ -0.2
CD44-209ENST00000433892 DENND2AQ9ULE3 1009 aa13.78□□□□□ -0.2
CD44-209ENST00000433892 ITGA6P23229 1130 aa13.77□□□□□ -0.21
CD44-209ENST00000433892 ARID5BQ14865 1188 aa13.77□□□□□ -0.21
CD44-209ENST00000433892 STK38Q15208 465 aa13.77□□□□□ -0.21
CD44-209ENST00000433892 RIPOR2Q9Y4F9 1068 aa13.77□□□□□ -0.21
CD44-209ENST00000433892 RIC1Q4ADV7 1423 aa13.76□□□□□ -0.21
CD44-209ENST00000433892 SLC9C2Q5TAH2 1124 aa13.76□□□□□ -0.21
CD44-209ENST00000433892 MRFAP1L1Q96HT8 127 aa13.76□□□□□ -0.21
CD44-209ENST00000433892 TAOK2Q9UL54 1235 aa13.76□□□□□ -0.21
CD44-209ENST00000433892 STARD3NLO95772 234 aa13.76□□□□□ -0.21
CD44-209ENST00000433892 LRRC8AQ8IWT6 810 aa13.76□□□□□ -0.21
CD44-209ENST00000433892 CEP57L1Q8IYX8 460 aa13.76□□□□□ -0.21
CD44-209ENST00000433892 AOPEPQ8N6M6 819 aa13.76□□□□□ -0.21
CD44-209ENST00000433892 TTLL11Q8NHH1 800 aa13.76□□□□□ -0.21
CD44-209ENST00000433892 NKX2-3Q8TAU0 364 aa13.76□□□□□ -0.21
CD44-209ENST00000433892 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.76□□□□□ -0.21
CD44-209ENST00000433892 CNNM1Q9NRU3 951 aa13.76□□□□□ -0.21
CD44-209ENST00000433892 A0A1W2PQ27 194 aa13.75□□□□□ -0.21
CD44-209ENST00000433892 A0A1W2PQ64 194 aa13.75□□□□□ -0.21
CD44-209ENST00000433892 A0A1W2PQD8 194 aa13.75□□□□□ -0.21
CD44-209ENST00000433892 KIF28PB7ZC32 967 aa13.75□□□□□ -0.21
CD44-209ENST00000433892 MYSM1Q5VVJ2 828 aa13.75□□□□□ -0.21
CD44-209ENST00000433892 GIGYF2Q6Y7W6 1299 aaKnown RBP13.75□□□□□ -0.21
CD44-209ENST00000433892 NLRP10Q86W26 655 aa13.75□□□□□ -0.21
CD44-209ENST00000433892 KCNG4Q8TDN1 519 aa13.75□□□□□ -0.21
CD44-209ENST00000433892 ZMYND15Q9H091 742 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms