RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 ANKRD44Q8N8A2 993 aa28.68■■■□□ 2.18
HOMER3-203ENST00000433218 CNNM1Q9NRU3 951 aa28.68■■■□□ 2.18
HOMER3-203ENST00000433218 FZD1Q9UP38 647 aa28.68■■■□□ 2.18
HOMER3-203ENST00000433218 UTYO14607 1347 aa28.67■■■□□ 2.18
HOMER3-203ENST00000433218 F8W031 263 aaPredicted RBP28.67■■■□□ 2.18
HOMER3-203ENST00000433218 IL1R1P14778 569 aa28.66■■■□□ 2.18
HOMER3-203ENST00000433218 SLFN5Q08AF3 891 aa28.66■■■□□ 2.18
HOMER3-203ENST00000433218 TNRC18O15417 2968 aaPredicted RBP28.65■■■□□ 2.18
HOMER3-203ENST00000433218 UBE2Q2LH0YL09 131 aa28.65■■■□□ 2.18
HOMER3-203ENST00000433218 E9PSI1 815 aa28.64■■■□□ 2.18
HOMER3-203ENST00000433218 ZNF804AQ7Z570 1209 aa28.64■■■□□ 2.18
HOMER3-203ENST00000433218 HTTP42858 3142 aa28.64■■■□□ 2.18
HOMER3-203ENST00000433218 CA12O43570 354 aa28.63■■■□□ 2.17
HOMER3-203ENST00000433218 GYG1P46976 350 aa28.63■■■□□ 2.17
HOMER3-203ENST00000433218 KLHDC4Q8TBB5 520 aa28.63■■■□□ 2.17
HOMER3-203ENST00000433218 CCDC102AQ96A19 550 aa28.63■■■□□ 2.17
HOMER3-203ENST00000433218 PRKG1Q13976 671 aa28.62■■■□□ 2.17
HOMER3-203ENST00000433218 LRRC24Q50LG9 513 aa28.62■■■□□ 2.17
HOMER3-203ENST00000433218 CSRNP1Q96S65 589 aa28.62■■■□□ 2.17
HOMER3-203ENST00000433218 RABL6Q3YEC7 729 aaPredicted RBP28.61■■■□□ 2.17
HOMER3-203ENST00000433218 RNF186Q9NXI6 227 aa28.6■■■□□ 2.17
HOMER3-203ENST00000433218 HDAC9Q9UKV0 1011 aa28.6■■■□□ 2.17
HOMER3-203ENST00000433218 RIPOR2Q9Y4F9 1068 aa28.6■■■□□ 2.17
HOMER3-203ENST00000433218 PTPRCP08575 1304 aa28.6■■■□□ 2.17
HOMER3-203ENST00000433218 CENPFP49454 3210 aa28.6■■■□□ 2.17
HOMER3-203ENST00000433218 CLRN2A0PK11 232 aa28.6■■■□□ 2.17
HOMER3-203ENST00000433218 TRPA1O75762 1119 aa28.6■■■□□ 2.17
HOMER3-203ENST00000433218 MKRN3Q13064 507 aaKnown RBP28.6■■■□□ 2.17
HOMER3-203ENST00000433218 MCOLN1Q9GZU1 580 aa28.6■■■□□ 2.17
HOMER3-203ENST00000433218 COL1A1P02452 1464 aaPredicted RBP28.59■■■□□ 2.17
HOMER3-203ENST00000433218 FKBP1BP68106 108 aa28.59■■■□□ 2.17
HOMER3-203ENST00000433218 TTLL12Q14166 644 aaPredicted RBP28.59■■■□□ 2.17
HOMER3-203ENST00000433218 CFAP100Q494V2 611 aa28.58■■■□□ 2.17
HOMER3-203ENST00000433218 APOBEC3FQ8IUX4 373 aaKnown RBP28.58■■■□□ 2.17
HOMER3-203ENST00000433218 USP44Q9H0E7 712 aa28.58■■■□□ 2.17
HOMER3-203ENST00000433218 IQSEC3Q9UPP2 1182 aaPredicted RBP28.58■■■□□ 2.17
HOMER3-203ENST00000433218 DLGAP5Q15398 846 aa28.57■■■□□ 2.16
HOMER3-203ENST00000433218 GRIK5Q16478 980 aa28.57■■■□□ 2.16
HOMER3-203ENST00000433218 VGLL2Q8N8G2 317 aa28.57■■■□□ 2.16
HOMER3-203ENST00000433218 FAM84BQ96KN1 310 aaPredicted RBP28.57■■■□□ 2.16
HOMER3-203ENST00000433218 SPDYE2BA6NHP3 402 aa28.56■■■□□ 2.16
HOMER3-203ENST00000433218 SPDYE6P0CI01 402 aa28.56■■■□□ 2.16
HOMER3-203ENST00000433218 PRMT6Q96LA8 375 aaPredicted RBP28.56■■■□□ 2.16
HOMER3-203ENST00000433218 PTPN12Q05209 780 aaKnown RBP28.55■■■□□ 2.16
HOMER3-203ENST00000433218 UBE4AQ14139 1066 aa28.55■■■□□ 2.16
HOMER3-203ENST00000433218 TRMT2AQ8IZ69 625 aaKnown RBP28.55■■■□□ 2.16
HOMER3-203ENST00000433218 MTMR14Q8NCE2 650 aa28.55■■■□□ 2.16
HOMER3-203ENST00000433218 TDRD7Q8NHU6 1098 aaKnown RBP28.55■■■□□ 2.16
HOMER3-203ENST00000433218 SMC4Q9NTJ3 1288 aa28.55■■■□□ 2.16
HOMER3-203ENST00000433218 SAGE1Q9NXZ1 904 aa28.55■■■□□ 2.16
HOMER3-203ENST00000433218 FAM205AQ6ZU69 1335 aa28.55■■■□□ 2.16
HOMER3-203ENST00000433218 DGKZQ13574 1117 aa28.53■■■□□ 2.16
HOMER3-203ENST00000433218 MFSD14BQ5SR56 506 aa28.53■■■□□ 2.16
HOMER3-203ENST00000433218 DEFB129Q9H1M3 183 aa28.53■■■□□ 2.16
HOMER3-203ENST00000433218 CCDC85CA6NKD9 419 aa28.52■■■□□ 2.16
HOMER3-203ENST00000433218 FKBP1AP62942 108 aaKnown RBP28.52■■■□□ 2.16
HOMER3-203ENST00000433218 CDAN1Q8IWY9 1227 aa28.52■■■□□ 2.16
HOMER3-203ENST00000433218 VEZTQ9HBM0 779 aa28.52■■■□□ 2.16
HOMER3-203ENST00000433218 MROH5Q6ZUA9 1318 aa28.52■■■□□ 2.16
HOMER3-203ENST00000433218 HIBADHP31937 336 aaKnown RBP28.52■■■□□ 2.16
HOMER3-203ENST00000433218 ANGEL1Q9UNK9 670 aaKnown RBP28.52■■■□□ 2.16
HOMER3-203ENST00000433218 RFX5P48382 616 aaPredicted RBP28.51■■■□□ 2.15
HOMER3-203ENST00000433218 MMP14P50281 582 aa28.51■■■□□ 2.15
HOMER3-203ENST00000433218 METTL24Q5JXM2 366 aa28.51■■■□□ 2.15
HOMER3-203ENST00000433218 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.51■■■□□ 2.15
HOMER3-203ENST00000433218 NF2P35240 595 aa28.5■■■□□ 2.15
HOMER3-203ENST00000433218 ALDH1L2Q3SY69 923 aa28.5■■■□□ 2.15
HOMER3-203ENST00000433218 CLMNQ96JQ2 1002 aa28.5■■■□□ 2.15
HOMER3-203ENST00000433218 BRCA2P51587 3418 aa28.49■■■□□ 2.15
HOMER3-203ENST00000433218 RBM5P52756 815 aaKnown RBP eCLIP28.49■■■□□ 2.15
HOMER3-203ENST00000433218 TTF2Q9UNY4 1162 aaKnown RBP28.49■■■□□ 2.15
HOMER3-203ENST00000433218 CHAF1AQ13111 956 aaPredicted RBP28.48■■■□□ 2.15
HOMER3-203ENST00000433218 NBPF12Q5TAG4 269 aaPredicted RBP28.48■■■□□ 2.15
HOMER3-203ENST00000433218 FBXO33Q7Z6M2 555 aa28.48■■■□□ 2.15
HOMER3-203ENST00000433218 HNRNPUQ00839 825 aaKnown RBP eCLIP28.47■■■□□ 2.15
HOMER3-203ENST00000433218 LDLRAD1Q5T700 205 aa28.47■■■□□ 2.15
HOMER3-203ENST00000433218 PDE8BO95263 885 aa28.45■■■□□ 2.15
HOMER3-203ENST00000433218 TBC1D8O95759 1140 aa28.45■■■□□ 2.15
HOMER3-203ENST00000433218 BCAMP50895 628 aa28.45■■■□□ 2.15
HOMER3-203ENST00000433218 ARMC9Q7Z3E5 817 aa28.45■■■□□ 2.15
HOMER3-203ENST00000433218 R3HDMLQ9H3Y0 253 aa28.45■■■□□ 2.15
HOMER3-203ENST00000433218 TDRD3Q9H7E2 651 aaKnown RBP28.45■■■□□ 2.15
HOMER3-203ENST00000433218 NOB1Q9ULX3 412 aaKnown RBP28.45■■■□□ 2.15
HOMER3-203ENST00000433218 SPDYE2Q495Y8 402 aa28.44■■■□□ 2.14
HOMER3-203ENST00000433218 FGFR2P21802 821 aa28.43■■■□□ 2.14
HOMER3-203ENST00000433218 RASA3Q14644 834 aa28.43■■■□□ 2.14
HOMER3-203ENST00000433218 ZNF70Q9UC06 446 aaPredicted RBP28.43■■■□□ 2.14
HOMER3-203ENST00000433218 CRKP46108 304 aa28.43■■■□□ 2.14
HOMER3-203ENST00000433218 SPRYD7Q5W111 196 aa28.43■■■□□ 2.14
HOMER3-203ENST00000433218 ATG9AQ7Z3C6 839 aa28.43■■■□□ 2.14
HOMER3-203ENST00000433218 AK9Q5TCS8 1911 aa28.42■■■□□ 2.14
HOMER3-203ENST00000433218 MYH2Q9UKX2 1941 aa28.42■■■□□ 2.14
HOMER3-203ENST00000433218 MYO1BO43795 1136 aa28.42■■■□□ 2.14
HOMER3-203ENST00000433218 GJA5P36382 358 aa28.42■■■□□ 2.14
HOMER3-203ENST00000433218 MAP3K11Q16584 847 aa28.42■■■□□ 2.14
HOMER3-203ENST00000433218 DZIP1LQ8IYY4 767 aaKnown RBP28.42■■■□□ 2.14
HOMER3-203ENST00000433218 SIL1Q9H173 461 aa28.42■■■□□ 2.14
HOMER3-203ENST00000433218 SERPINA10Q9UK55 444 aa28.42■■■□□ 2.14
HOMER3-203ENST00000433218 TNNQ9UQP3 1299 aa28.42■■■□□ 2.14
HOMER3-203ENST00000433218 CACNB3P54284 484 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms