RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 ISCA1Q9BUE6 129 aa13.26□□□□□ -0.29
HOXD3-203ENST00000432796 CHMP4AQ9BY43 222 aa13.26□□□□□ -0.29
HOXD3-203ENST00000432796 ARHGAP39Q9C0H5 1083 aa13.26□□□□□ -0.29
HOXD3-203ENST00000432796 PRKRIP1Q9H875 184 aaPredicted RBP13.26□□□□□ -0.29
HOXD3-203ENST00000432796 MED23Q9ULK4 1368 aa13.26□□□□□ -0.29
HOXD3-203ENST00000432796 FARP2O94887 1054 aaPredicted RBP13.25□□□□□ -0.29
HOXD3-203ENST00000432796 RTL5Q5HYW3 569 aaPredicted RBP13.25□□□□□ -0.29
HOXD3-203ENST00000432796 KIAA0825Q8IV33 1275 aa13.25□□□□□ -0.29
HOXD3-203ENST00000432796 ZNF804BA4D1E1 1349 aa13.24□□□□□ -0.29
HOXD3-203ENST00000432796 CCL15-CCL14A0A0B4J2E2 113 aa13.24□□□□□ -0.29
HOXD3-203ENST00000432796 USP2O75604 605 aaPredicted RBP13.24□□□□□ -0.29
HOXD3-203ENST00000432796 WDHD1O75717 1129 aaPredicted RBP13.24□□□□□ -0.29
HOXD3-203ENST00000432796 CCL5P13501 91 aa13.24□□□□□ -0.29
HOXD3-203ENST00000432796 BMP8BP34820 402 aa13.24□□□□□ -0.29
HOXD3-203ENST00000432796 CCL15Q16663 113 aa13.24□□□□□ -0.29
HOXD3-203ENST00000432796 LRIT3Q3SXY7 679 aa13.24□□□□□ -0.29
HOXD3-203ENST00000432796 FAM43AQ8N2R8 423 aa13.24□□□□□ -0.29
HOXD3-203ENST00000432796 PLBD2Q8NHP8 589 aa13.24□□□□□ -0.29
HOXD3-203ENST00000432796 ZNF646O15015 1829 aaPredicted RBP13.24□□□□□ -0.29
HOXD3-203ENST00000432796 ATP5J2-PTCD1G3V325 749 aa13.23□□□□□ -0.29
HOXD3-203ENST00000432796 TLR2O60603 784 aa13.23□□□□□ -0.29
HOXD3-203ENST00000432796 HSP90B1P14625 803 aaKnown RBP13.23□□□□□ -0.29
HOXD3-203ENST00000432796 GRK4P32298 578 aa13.23□□□□□ -0.29
HOXD3-203ENST00000432796 GTF2A2P52657 109 aa13.23□□□□□ -0.29
HOXD3-203ENST00000432796 NBPF12Q5TAG4 269 aaPredicted RBP13.23□□□□□ -0.29
HOXD3-203ENST00000432796 U2AF1L4Q8WU68 220 aaKnown RBP13.23□□□□□ -0.29
HOXD3-203ENST00000432796 GDF15Q99988 308 aa13.23□□□□□ -0.29
HOXD3-203ENST00000432796 COA1Q9GZY4 146 aa13.23□□□□□ -0.29
HOXD3-203ENST00000432796 RNF208Q9H0X6 261 aa13.23□□□□□ -0.29
HOXD3-203ENST00000432796 ELP3Q9H9T3 547 aa13.23□□□□□ -0.29
HOXD3-203ENST00000432796 HOXB7P09629 217 aa13.22□□□□□ -0.29
HOXD3-203ENST00000432796 TRIM28Q13263 835 aaKnown RBP13.22□□□□□ -0.29
HOXD3-203ENST00000432796 DLGAP5Q15398 846 aa13.22□□□□□ -0.29
HOXD3-203ENST00000432796 CCDC152Q4G0S7 254 aa13.22□□□□□ -0.29
HOXD3-203ENST00000432796 SRRDQ9UH36 339 aa13.22□□□□□ -0.29
HOXD3-203ENST00000432796 ADAMTS8Q9UP79 889 aa13.22□□□□□ -0.29
HOXD3-203ENST00000432796 RIPOR2Q9Y4F9 1068 aa13.22□□□□□ -0.29
HOXD3-203ENST00000432796 MUC3AQ02505 3323 aa13.21□□□□□ -0.29
HOXD3-203ENST00000432796 ANP32CO43423 234 aa13.21□□□□□ -0.29
HOXD3-203ENST00000432796 HDGFL1Q5TGJ6 251 aa13.21□□□□□ -0.29
HOXD3-203ENST00000432796 TTLL5Q6EMB2 1281 aa13.21□□□□□ -0.29
HOXD3-203ENST00000432796 ANKRD18AQ8IVF6 992 aa13.21□□□□□ -0.29
HOXD3-203ENST00000432796 MTMR14Q8NCE2 650 aa13.21□□□□□ -0.29
HOXD3-203ENST00000432796 ZCCHC17Q9NP64 241 aaKnown RBP13.21□□□□□ -0.29
HOXD3-203ENST00000432796 GNAI1P63096 354 aa13.2□□□□□ -0.3
HOXD3-203ENST00000432796 UBXN2AP68543 259 aa13.2□□□□□ -0.3
HOXD3-203ENST00000432796 ZBTB38Q8NAP3 1195 aaPredicted RBP13.2□□□□□ -0.3
HOXD3-203ENST00000432796 HELBQ8NG08 1087 aaPredicted RBP13.2□□□□□ -0.3
HOXD3-203ENST00000432796 RAET1EQ8TD07 263 aa13.2□□□□□ -0.3
HOXD3-203ENST00000432796 TRIM47Q96LD4 638 aa13.2□□□□□ -0.3
HOXD3-203ENST00000432796 RPTORQ8N122 1335 aa13.19□□□□□ -0.3
HOXD3-203ENST00000432796 CLRN2A0PK11 232 aa13.19□□□□□ -0.3
HOXD3-203ENST00000432796 MYO1BO43795 1136 aa13.19□□□□□ -0.3
HOXD3-203ENST00000432796 CAPN2P17655 700 aa13.19□□□□□ -0.3
HOXD3-203ENST00000432796 HOXD10P28358 340 aa13.19□□□□□ -0.3
HOXD3-203ENST00000432796 BCAMP50895 628 aa13.19□□□□□ -0.3
HOXD3-203ENST00000432796 CNKSR2Q8WXI2 1034 aa13.19□□□□□ -0.3
HOXD3-203ENST00000432796 DBF4Q9UBU7 674 aaPredicted RBP13.19□□□□□ -0.3
HOXD3-203ENST00000432796 CHL1O00533 1208 aa13.18□□□□□ -0.3
HOXD3-203ENST00000432796 SGPL1O95470 568 aa13.18□□□□□ -0.3
HOXD3-203ENST00000432796 OSBPP22059 807 aa13.18□□□□□ -0.3
HOXD3-203ENST00000432796 PSMC4P43686 418 aa13.18□□□□□ -0.3
HOXD3-203ENST00000432796 CCT4P50991 539 aaKnown RBP13.18□□□□□ -0.3
HOXD3-203ENST00000432796 RASA3Q14644 834 aa13.18□□□□□ -0.3
HOXD3-203ENST00000432796 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.18□□□□□ -0.3
HOXD3-203ENST00000432796 TDHQ8IZJ6 230 aa13.18□□□□□ -0.3
HOXD3-203ENST00000432796 VEZTQ9HBM0 779 aa13.18□□□□□ -0.3
HOXD3-203ENST00000432796 IFT57Q9NWB7 429 aa13.18□□□□□ -0.3
HOXD3-203ENST00000432796 CHPF2Q9P2E5 772 aa13.18□□□□□ -0.3
HOXD3-203ENST00000432796 BIN2Q9UBW5 565 aaPredicted RBP13.18□□□□□ -0.3
HOXD3-203ENST00000432796 EYSQ5T1H1 3165 aa13.18□□□□□ -0.3
HOXD3-203ENST00000432796 SPDYE2BA6NHP3 402 aa13.17□□□□□ -0.3
HOXD3-203ENST00000432796 APAF1O14727 1248 aa13.17□□□□□ -0.3
HOXD3-203ENST00000432796 PDE8AO60658 829 aa13.17□□□□□ -0.3
HOXD3-203ENST00000432796 SPDYE6P0CI01 402 aa13.17□□□□□ -0.3
HOXD3-203ENST00000432796 COL9A1P20849 921 aa13.17□□□□□ -0.3
HOXD3-203ENST00000432796 CTGFP29279 349 aa13.17□□□□□ -0.3
HOXD3-203ENST00000432796 GTF2IP78347 998 aa13.17□□□□□ -0.3
HOXD3-203ENST00000432796 GOLGA2Q08379 1002 aa13.17□□□□□ -0.3
HOXD3-203ENST00000432796 VGLL4Q14135 290 aa13.17□□□□□ -0.3
HOXD3-203ENST00000432796 TXNRD3Q86VQ6 643 aa13.17□□□□□ -0.3
HOXD3-203ENST00000432796 CCDC85AQ96PX6 553 aaPredicted RBP13.17□□□□□ -0.3
HOXD3-203ENST00000432796 CDC5LQ99459 802 aaKnown RBP13.17□□□□□ -0.3
HOXD3-203ENST00000432796 HYPKQ9NX55 129 aa13.17□□□□□ -0.3
HOXD3-203ENST00000432796 MINPP1Q9UNW1 487 aa13.17□□□□□ -0.3
HOXD3-203ENST00000432796 MYPNQ86TC9 1320 aa13.16□□□□□ -0.3
HOXD3-203ENST00000432796 ZSWIM8A7E2V4 1837 aa13.16□□□□□ -0.3
HOXD3-203ENST00000432796 ECM2O94769 699 aaPredicted RBP13.16□□□□□ -0.3
HOXD3-203ENST00000432796 CETPP11597 493 aa13.16□□□□□ -0.3
HOXD3-203ENST00000432796 C17orf99Q6UX52 265 aa13.16□□□□□ -0.3
HOXD3-203ENST00000432796 SLAIN1Q8ND83 568 aa13.16□□□□□ -0.3
HOXD3-203ENST00000432796 UNC93B1Q9H1C4 597 aa13.16□□□□□ -0.3
HOXD3-203ENST00000432796 BSDC1Q9NW68 430 aaPredicted RBP13.16□□□□□ -0.3
HOXD3-203ENST00000432796 TRIM35Q9UPQ4 493 aa13.16□□□□□ -0.3
HOXD3-203ENST00000432796 PCDHAC2Q9Y5I4 1007 aa13.16□□□□□ -0.3
HOXD3-203ENST00000432796 TTC28Q96AY4 2481 aa13.15□□□□□ -0.3
HOXD3-203ENST00000432796 ZNF316A6NFI3 1004 aaPredicted RBP13.15□□□□□ -0.3
HOXD3-203ENST00000432796 BTBD19C9JJ37 291 aa13.15□□□□□ -0.3
HOXD3-203ENST00000432796 FMNL1O95466 1100 aaPredicted RBP13.15□□□□□ -0.3
HOXD3-203ENST00000432796 DDX58O95786 925 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms