RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 FKBP4Q02790 459 aaKnown RBP eCLIP22.05■■□□□ 1.12
HMGN1-206ENST00000431390 C15orf52Q6ZUT6 534 aaKnown RBP22.05■■□□□ 1.12
HMGN1-206ENST00000431390 MYH7P12883 1935 aa22.05■■□□□ 1.12
HMGN1-206ENST00000431390 TTF1Q15361 905 aaPredicted RBP22.04■■□□□ 1.12
HMGN1-206ENST00000431390 FBXO33Q7Z6M2 555 aa22.04■■□□□ 1.12
HMGN1-206ENST00000431390 FAM84BQ96KN1 310 aaPredicted RBP22.04■■□□□ 1.12
HMGN1-206ENST00000431390 GGA1Q9UJY5 639 aa22.04■■□□□ 1.12
HMGN1-206ENST00000431390 MYH13Q9UKX3 1938 aa22.04■■□□□ 1.12
HMGN1-206ENST00000431390 PCNTO95613 3336 aa22.04■■□□□ 1.12
HMGN1-206ENST00000431390 WTIPA6NIX2 430 aaPredicted RBP22.04■■□□□ 1.12
HMGN1-206ENST00000431390 GYG1P46976 350 aa22.04■■□□□ 1.12
HMGN1-206ENST00000431390 LRRFIP1Q32MZ4 808 aaKnown RBP22.04■■□□□ 1.12
HMGN1-206ENST00000431390 SNRKQ9NRH2 765 aa22.04■■□□□ 1.12
HMGN1-206ENST00000431390 HMG20BQ9P0W2 317 aa22.04■■□□□ 1.12
HMGN1-206ENST00000431390 NSFL1CQ9UNZ2 370 aaKnown RBP22.04■■□□□ 1.12
HMGN1-206ENST00000431390 RAD50Q92878 1312 aa22.03■■□□□ 1.12
HMGN1-206ENST00000431390 SLX4Q8IY92 1834 aa22.03■■□□□ 1.12
HMGN1-206ENST00000431390 DOCK2Q92608 1830 aa22.03■■□□□ 1.12
HMGN1-206ENST00000431390 SEMA3EO15041 775 aa22.03■■□□□ 1.12
HMGN1-206ENST00000431390 CAPN15O75808 1086 aa22.03■■□□□ 1.12
HMGN1-206ENST00000431390 RASGRF1Q13972 1273 aa22.03■■□□□ 1.12
HMGN1-206ENST00000431390 VPS37DQ86XT2 251 aa22.03■■□□□ 1.12
HMGN1-206ENST00000431390 SPATA5Q8NB90 893 aa22.03■■□□□ 1.12
HMGN1-206ENST00000431390 TBC1D32Q96NH3 1257 aa22.03■■□□□ 1.12
HMGN1-206ENST00000431390 TMX4Q9H1E5 349 aaPredicted RBP22.03■■□□□ 1.12
HMGN1-206ENST00000431390 SGSM2O43147 1006 aa22.02■■□□□ 1.12
HMGN1-206ENST00000431390 HIBADHP31937 336 aaKnown RBP22.02■■□□□ 1.12
HMGN1-206ENST00000431390 PI16Q6UXB8 463 aa22.02■■□□□ 1.12
HMGN1-206ENST00000431390 SLC51AQ86UW1 340 aa22.02■■□□□ 1.12
HMGN1-206ENST00000431390 C22orf23Q9BZE7 217 aa22.02■■□□□ 1.12
HMGN1-206ENST00000431390 ANTXR1Q9H6X2 564 aa22.02■■□□□ 1.12
HMGN1-206ENST00000431390 ZNF219Q9P2Y4 722 aaPredicted RBP22.02■■□□□ 1.12
HMGN1-206ENST00000431390 POTECB2RU33 542 aa22.01■■□□□ 1.11
HMGN1-206ENST00000431390 EPB41L2O43491 1005 aaKnown RBP22.01■■□□□ 1.11
HMGN1-206ENST00000431390 UFL1O94874 794 aa22.01■■□□□ 1.11
HMGN1-206ENST00000431390 KLRK1P26718 216 aa22.01■■□□□ 1.11
HMGN1-206ENST00000431390 PRPF40BQ6NWY9 871 aaKnown RBP22.01■■□□□ 1.11
HMGN1-206ENST00000431390 CWC27Q6UX04 472 aaKnown RBP22.01■■□□□ 1.11
HMGN1-206ENST00000431390 TNS4Q8IZW8 715 aa22.01■■□□□ 1.11
HMGN1-206ENST00000431390 PDS5AQ29RF7 1337 aaKnown RBP22.01■■□□□ 1.11
HMGN1-206ENST00000431390 CYP2E1P05181 493 aaPredicted RBP22■■□□□ 1.11
HMGN1-206ENST00000431390 TBC1D16Q8TBP0 767 aa22■■□□□ 1.11
HMGN1-206ENST00000431390 DENND2AQ9ULE3 1009 aa22■■□□□ 1.11
HMGN1-206ENST00000431390 C21orf2O43822 256 aa21.99■■□□□ 1.11
HMGN1-206ENST00000431390 NMIQ13287 307 aaPredicted RBP21.99■■□□□ 1.11
HMGN1-206ENST00000431390 MED23Q9ULK4 1368 aa21.99■■□□□ 1.11
HMGN1-206ENST00000431390 MYO5AQ9Y4I1 1855 aaKnown RBP21.99■■□□□ 1.11
HMGN1-206ENST00000431390 ZFYP08048 801 aaPredicted RBP21.99■■□□□ 1.11
HMGN1-206ENST00000431390 HSPA1AP0DMV8 641 aaKnown RBP21.99■■□□□ 1.11
HMGN1-206ENST00000431390 HSPA1BP0DMV9 641 aaKnown RBP21.99■■□□□ 1.11
HMGN1-206ENST00000431390 RBM25P49756 843 aaKnown RBP21.99■■□□□ 1.11
HMGN1-206ENST00000431390 MPNDQ8N594 471 aa21.99■■□□□ 1.11
HMGN1-206ENST00000431390 USP26Q9BXU7 913 aa21.99■■□□□ 1.11
HMGN1-206ENST00000431390 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.99■■□□□ 1.11
HMGN1-206ENST00000431390 IL25Q9H293 177 aa21.99■■□□□ 1.11
HMGN1-206ENST00000431390 POLLQ9UGP5 575 aa21.99■■□□□ 1.11
HMGN1-206ENST00000431390 DUOX1Q9NRD9 1551 aa21.99■■□□□ 1.11
HMGN1-206ENST00000431390 CC2D2BQ6DHV5 1058 aa21.98■■□□□ 1.11
HMGN1-206ENST00000431390 DPY19L2Q6NUT2 758 aa21.98■■□□□ 1.11
HMGN1-206ENST00000431390 ZNF804AQ7Z570 1209 aa21.98■■□□□ 1.11
HMGN1-206ENST00000431390 TXNRD3Q86VQ6 643 aa21.98■■□□□ 1.11
HMGN1-206ENST00000431390 FAM227BQ96M60 508 aa21.98■■□□□ 1.11
HMGN1-206ENST00000431390 COL1A1P02452 1464 aaPredicted RBP21.97■■□□□ 1.11
HMGN1-206ENST00000431390 A0A0D9SFI3 127 aa21.97■■□□□ 1.11
HMGN1-206ENST00000431390 RNF113AO15541 343 aaKnown RBP21.97■■□□□ 1.11
HMGN1-206ENST00000431390 ZSCAN25Q6NSZ9 544 aa21.97■■□□□ 1.11
HMGN1-206ENST00000431390 C6orf229H3BNL8 230 aa21.96■■□□□ 1.11
HMGN1-206ENST00000431390 DPP8Q6V1X1 898 aaPredicted RBP21.96■■□□□ 1.11
HMGN1-206ENST00000431390 C7orf43Q8WVR3 580 aa21.96■■□□□ 1.11
HMGN1-206ENST00000431390 ANO2Q9NQ90 1003 aa21.96■■□□□ 1.11
HMGN1-206ENST00000431390 PIH1D3Q9NQM4 214 aaKnown RBP21.96■■□□□ 1.11
HMGN1-206ENST00000431390 HELLSQ9NRZ9 838 aa21.96■■□□□ 1.11
HMGN1-206ENST00000431390 ZMYM1Q5SVZ6 1142 aa21.95■■□□□ 1.11
HMGN1-206ENST00000431390 ANP32AP39687 249 aaKnown RBP21.95■■□□□ 1.1
HMGN1-206ENST00000431390 MCMDC2Q4G0Z9 681 aa21.95■■□□□ 1.1
HMGN1-206ENST00000431390 GRIPAP1Q4V328 841 aa21.95■■□□□ 1.1
HMGN1-206ENST00000431390 KIAA1211Q6ZU35 1233 aa21.95■■□□□ 1.1
HMGN1-206ENST00000431390 TDRD7Q8NHU6 1098 aaKnown RBP21.95■■□□□ 1.1
HMGN1-206ENST00000431390 IQSEC3Q9UPP2 1182 aaPredicted RBP21.95■■□□□ 1.1
HMGN1-206ENST00000431390 SNED1Q8TER0 1413 aa21.94■■□□□ 1.1
HMGN1-206ENST00000431390 FRAT2O75474 233 aaPredicted RBP21.94■■□□□ 1.1
HMGN1-206ENST00000431390 WASHC4Q2M389 1173 aa21.94■■□□□ 1.1
HMGN1-206ENST00000431390 OLFM4Q6UX06 510 aa21.94■■□□□ 1.1
HMGN1-206ENST00000431390 IDH1O75874 414 aaKnown RBP21.93■■□□□ 1.1
HMGN1-206ENST00000431390 ADD2P35612 726 aa21.93■■□□□ 1.1
HMGN1-206ENST00000431390 MAP3K12Q12852 859 aa21.93■■□□□ 1.1
HMGN1-206ENST00000431390 GPR101Q96P66 508 aaPredicted RBP21.93■■□□□ 1.1
HMGN1-206ENST00000431390 EYA3Q99504 573 aa21.93■■□□□ 1.1
HMGN1-206ENST00000431390 LSG1Q9H089 658 aaKnown RBP21.93■■□□□ 1.1
HMGN1-206ENST00000431390 TAOK3Q9H2K8 898 aa21.93■■□□□ 1.1
HMGN1-206ENST00000431390 IGSF3O75054 1194 aa21.92■■□□□ 1.1
HMGN1-206ENST00000431390 IL1R1P14778 569 aa21.92■■□□□ 1.1
HMGN1-206ENST00000431390 UBE3CQ15386 1083 aa21.92■■□□□ 1.1
HMGN1-206ENST00000431390 APPBP2Q92624 585 aa21.92■■□□□ 1.1
HMGN1-206ENST00000431390 RTFDC1Q9BY42 306 aaPredicted RBP21.92■■□□□ 1.1
HMGN1-206ENST00000431390 CD209Q9NNX6 404 aa21.92■■□□□ 1.1
HMGN1-206ENST00000431390 LTBP3Q9NS15 1303 aa21.92■■□□□ 1.1
HMGN1-206ENST00000431390 CHGBP05060 677 aa21.91■■□□□ 1.1
HMGN1-206ENST00000431390 SLC9C2Q5TAH2 1124 aa21.91■■□□□ 1.1
HMGN1-206ENST00000431390 DDNO94850 711 aaPredicted RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms