RNA–Protein interactions for RNA: ENST00000427004.5

PHF1-203, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-203ENST00000427004 WDR90Q96KV7 1748 aa18.92■□□□□ 0.62
PHF1-203ENST00000427004 EGFRP00533 1210 aa18.92■□□□□ 0.62
PHF1-203ENST00000427004 POTEIP0CG38 1075 aa18.92■□□□□ 0.62
PHF1-203ENST00000427004 POTEJP0CG39 1038 aa18.92■□□□□ 0.62
PHF1-203ENST00000427004 EPS15P42566 896 aa18.92■□□□□ 0.62
PHF1-203ENST00000427004 MCAMP43121 646 aa18.92■□□□□ 0.62
PHF1-203ENST00000427004 SCNN1DP51172 638 aa18.92■□□□□ 0.62
PHF1-203ENST00000427004 RASGRF1Q13972 1273 aa18.92■□□□□ 0.62
PHF1-203ENST00000427004 CAVIN4Q5BKX8 364 aa18.92■□□□□ 0.62
PHF1-203ENST00000427004 TTLL5Q6EMB2 1281 aa18.92■□□□□ 0.62
PHF1-203ENST00000427004 VPS33BQ9H267 617 aa18.92■□□□□ 0.62
PHF1-203ENST00000427004 RWDD1Q9H446 243 aaPredicted RBP18.92■□□□□ 0.62
PHF1-203ENST00000427004 USP17L3A6NCW0 530 aa18.91■□□□□ 0.62
PHF1-203ENST00000427004 USP17L4A6NCW7 530 aa18.91■□□□□ 0.62
PHF1-203ENST00000427004 FRAT2O75474 233 aaPredicted RBP18.91■□□□□ 0.62
PHF1-203ENST00000427004 HSP90AB4PQ58FF6 505 aa18.91■□□□□ 0.62
PHF1-203ENST00000427004 TTC39AQ5SRH9 613 aa18.91■□□□□ 0.62
PHF1-203ENST00000427004 TBC1D9Q6ZT07 1266 aa18.91■□□□□ 0.62
PHF1-203ENST00000427004 USP17L1Q7RTZ2 530 aa18.91■□□□□ 0.62
PHF1-203ENST00000427004 PODNQ7Z5L7 613 aa18.91■□□□□ 0.62
PHF1-203ENST00000427004 EDC3Q96F86 508 aaKnown RBP18.91■□□□□ 0.62
PHF1-203ENST00000427004 GPR108Q9NPR9 543 aa18.91■□□□□ 0.62
PHF1-203ENST00000427004 CEP350Q5VT06 3117 aa18.9■□□□□ 0.62
PHF1-203ENST00000427004 RBM26Q5T8P6 1007 aaKnown RBP18.9■□□□□ 0.62
PHF1-203ENST00000427004 KIAA0825Q8IV33 1275 aa18.9■□□□□ 0.62
PHF1-203ENST00000427004 SMC5Q8IY18 1101 aa18.9■□□□□ 0.62
PHF1-203ENST00000427004 CLASRPQ8N2M8 674 aaKnown RBP18.9■□□□□ 0.62
PHF1-203ENST00000427004 HMG20BQ9P0W2 317 aa18.9■□□□□ 0.62
PHF1-203ENST00000427004 AOX1Q06278 1338 aa18.9■□□□□ 0.62
PHF1-203ENST00000427004 VIL1P09327 827 aaKnown RBP18.89■□□□□ 0.61
PHF1-203ENST00000427004 IFIT2P09913 472 aaKnown RBP18.89■□□□□ 0.61
PHF1-203ENST00000427004 RSBN1LQ6PCB5 846 aaPredicted RBP18.89■□□□□ 0.61
PHF1-203ENST00000427004 TRPM4Q8TD43 1214 aa18.89■□□□□ 0.61
PHF1-203ENST00000427004 GPBP1L1Q9HC44 474 aaPredicted RBP18.89■□□□□ 0.61
PHF1-203ENST00000427004 SCAF8Q9UPN6 1271 aaKnown RBP18.89■□□□□ 0.61
PHF1-203ENST00000427004 ASTN2O75129 1339 aaPredicted RBP18.89■□□□□ 0.61
PHF1-203ENST00000427004 MAP4K4O95819 1239 aaPredicted RBP18.88■□□□□ 0.61
PHF1-203ENST00000427004 PDE4AP27815 886 aa18.88■□□□□ 0.61
PHF1-203ENST00000427004 ZAP70P43403 619 aa18.88■□□□□ 0.61
PHF1-203ENST00000427004 AAMPQ13685 434 aa18.88■□□□□ 0.61
PHF1-203ENST00000427004 DPY19L2Q6NUT2 758 aa18.88■□□□□ 0.61
PHF1-203ENST00000427004 SAMD7Q7Z3H4 446 aa18.88■□□□□ 0.61
PHF1-203ENST00000427004 GPC2Q8N158 579 aa18.88■□□□□ 0.61
PHF1-203ENST00000427004 ANTXR1Q9H6X2 564 aa18.88■□□□□ 0.61
PHF1-203ENST00000427004 CHGBP05060 677 aa18.87■□□□□ 0.61
PHF1-203ENST00000427004 ARID4AP29374 1257 aaPredicted RBP18.87■□□□□ 0.61
PHF1-203ENST00000427004 MFSD14BQ5SR56 506 aa18.87■□□□□ 0.61
PHF1-203ENST00000427004 STRIP1Q5VSL9 837 aa18.87■□□□□ 0.61
PHF1-203ENST00000427004 MICALL2Q8IY33 904 aa18.87■□□□□ 0.61
PHF1-203ENST00000427004 GMLQ99445 158 aa18.87■□□□□ 0.61
PHF1-203ENST00000427004 SCN4AP35499 1836 aa18.86■□□□□ 0.61
PHF1-203ENST00000427004 FAM205AQ6ZU69 1335 aa18.86■□□□□ 0.61
PHF1-203ENST00000427004 KDM2BQ8NHM5 1336 aa18.86■□□□□ 0.61
PHF1-203ENST00000427004 PRDX5P30044 214 aa18.86■□□□□ 0.61
PHF1-203ENST00000427004 TNIP1Q15025 636 aa18.86■□□□□ 0.61
PHF1-203ENST00000427004 TBC1D10BQ4KMP7 808 aaPredicted RBP18.86■□□□□ 0.61
PHF1-203ENST00000427004 DLK2Q6UY11 383 aa18.86■□□□□ 0.61
PHF1-203ENST00000427004 GCC1Q96CN9 775 aa18.86■□□□□ 0.61
PHF1-203ENST00000427004 BOLA2Q9H3K6 86 aa18.86■□□□□ 0.61
PHF1-203ENST00000427004 PIH1D3Q9NQM4 214 aaKnown RBP18.86■□□□□ 0.61
PHF1-203ENST00000427004 CNOT7Q9UIV1 285 aaKnown RBP18.86■□□□□ 0.61
PHF1-203ENST00000427004 POLR2AP24928 1970 aaKnown RBP18.86■□□□□ 0.61
PHF1-203ENST00000427004 ZC3H4Q9UPT8 1303 aaKnown RBP18.85■□□□□ 0.61
PHF1-203ENST00000427004 HIRAP54198 1017 aaPredicted RBP18.85■□□□□ 0.61
PHF1-203ENST00000427004 SLFNL1Q499Z3 407 aa18.85■□□□□ 0.61
PHF1-203ENST00000427004 SPATA5Q8NB90 893 aa18.85■□□□□ 0.61
PHF1-203ENST00000427004 DNAJC2Q99543 621 aaKnown RBP18.85■□□□□ 0.61
PHF1-203ENST00000427004 GPRC5DQ9NZD1 345 aa18.85■□□□□ 0.61
PHF1-203ENST00000427004 ABCF2Q9UG63 623 aa18.85■□□□□ 0.61
PHF1-203ENST00000427004 MYH2Q9UKX2 1941 aa18.84■□□□□ 0.61
PHF1-203ENST00000427004 SALL3Q9BXA9 1300 aa18.84■□□□□ 0.61
PHF1-203ENST00000427004 CYP2E1P05181 493 aaPredicted RBP18.84■□□□□ 0.61
PHF1-203ENST00000427004 NUCB1Q02818 461 aa18.84■□□□□ 0.61
PHF1-203ENST00000427004 DIXDC1Q155Q3 683 aa18.84■□□□□ 0.61
PHF1-203ENST00000427004 EAPPQ56P03 285 aaPredicted RBP18.84■□□□□ 0.61
PHF1-203ENST00000427004 CCDC158Q5M9N0 1113 aa18.84■□□□□ 0.61
PHF1-203ENST00000427004 CHD1LQ86WJ1 897 aa18.84■□□□□ 0.61
PHF1-203ENST00000427004 CCDC136Q96JN2 1154 aa18.84■□□□□ 0.61
PHF1-203ENST00000427004 DOCK2Q92608 1830 aa18.84■□□□□ 0.61
PHF1-203ENST00000427004 KIF3CO14782 793 aa18.83■□□□□ 0.6
PHF1-203ENST00000427004 ZNF384Q8TF68 577 aa18.83■□□□□ 0.6
PHF1-203ENST00000427004 L3MBTL3Q96JM7 780 aaPredicted RBP18.83■□□□□ 0.6
PHF1-203ENST00000427004 GNL3LQ9NVN8 582 aaKnown RBP18.83■□□□□ 0.6
PHF1-203ENST00000427004 HACL1Q9UJ83 578 aa18.83■□□□□ 0.6
PHF1-203ENST00000427004 DENND2AQ9ULE3 1009 aa18.83■□□□□ 0.6
PHF1-203ENST00000427004 EPHX2P34913 555 aa18.82■□□□□ 0.6
PHF1-203ENST00000427004 TAF1DQ9H5J8 278 aaPredicted RBP18.82■□□□□ 0.6
PHF1-203ENST00000427004 TTF2Q9UNY4 1162 aaKnown RBP18.82■□□□□ 0.6
PHF1-203ENST00000427004 GOLIM4O00461 696 aa18.81■□□□□ 0.6
PHF1-203ENST00000427004 UQCRFS1P1P0C7P4 283 aa18.81■□□□□ 0.6
PHF1-203ENST00000427004 FMR1Q06787 632 aaKnown RBP eCLIP18.81■□□□□ 0.6
PHF1-203ENST00000427004 USP17L8P0C7I0 530 aa18.8■□□□□ 0.6
PHF1-203ENST00000427004 LMOD1P29536 600 aaPredicted RBP18.8■□□□□ 0.6
PHF1-203ENST00000427004 NBPF9Q3BBW0 867 aa18.8■□□□□ 0.6
PHF1-203ENST00000427004 AGBL3Q8NEM8 1001 aa18.8■□□□□ 0.6
PHF1-203ENST00000427004 PI4K2BQ8TCG2 481 aa18.8■□□□□ 0.6
PHF1-203ENST00000427004 MAST2Q6P0Q8 1798 aa18.8■□□□□ 0.6
PHF1-203ENST00000427004 MYH7P12883 1935 aa18.8■□□□□ 0.6
PHF1-203ENST00000427004 MX1P20591 662 aa18.79■□□□□ 0.6
PHF1-203ENST00000427004 PLEKHM2Q8IWE5 1019 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms