RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 ECM29Q5VYK3 1845 aa17.42■□□□□ 0.38
VEGFB-202ENST00000426086 TAF5LO75529 589 aa17.41■□□□□ 0.38
VEGFB-202ENST00000426086 USP2O75604 605 aaPredicted RBP17.41■□□□□ 0.38
VEGFB-202ENST00000426086 MMP14P50281 582 aa17.41■□□□□ 0.38
VEGFB-202ENST00000426086 INHBEP58166 350 aa17.41■□□□□ 0.38
VEGFB-202ENST00000426086 MTMR14Q8NCE2 650 aa17.41■□□□□ 0.38
VEGFB-202ENST00000426086 HELBQ8NG08 1087 aaPredicted RBP17.41■□□□□ 0.38
VEGFB-202ENST00000426086 TSR2Q969E8 191 aaKnown RBP17.41■□□□□ 0.38
VEGFB-202ENST00000426086 PLA2G12BQ9BX93 195 aa17.41■□□□□ 0.38
VEGFB-202ENST00000426086 JAG2Q9Y219 1238 aa17.41■□□□□ 0.38
VEGFB-202ENST00000426086 A0A1B0GUL6 1792 aa17.4■□□□□ 0.38
VEGFB-202ENST00000426086 CSF1RP07333 972 aa17.4■□□□□ 0.38
VEGFB-202ENST00000426086 NEXNQ0ZGT2 675 aa17.4■□□□□ 0.38
VEGFB-202ENST00000426086 GCKRQ14397 625 aa17.4■□□□□ 0.38
VEGFB-202ENST00000426086 CFAP100Q494V2 611 aa17.4■□□□□ 0.38
VEGFB-202ENST00000426086 INTS3Q68E01 1043 aaKnown RBP17.4■□□□□ 0.38
VEGFB-202ENST00000426086 ARMC5Q96C12 935 aa17.4■□□□□ 0.38
VEGFB-202ENST00000426086 ANKRD2Q9GZV1 360 aa17.4■□□□□ 0.38
VEGFB-202ENST00000426086 OTOFQ9HC10 1997 aa17.4■□□□□ 0.38
VEGFB-202ENST00000426086 SPDYE2BA6NHP3 402 aa17.39■□□□□ 0.37
VEGFB-202ENST00000426086 PPP1R12BO60237 982 aaPredicted RBP17.39■□□□□ 0.37
VEGFB-202ENST00000426086 SPDYE6P0CI01 402 aa17.39■□□□□ 0.37
VEGFB-202ENST00000426086 FXR1P51114 621 aaKnown RBP eCLIP17.39■□□□□ 0.37
VEGFB-202ENST00000426086 CDAN1Q8IWY9 1227 aa17.39■□□□□ 0.37
VEGFB-202ENST00000426086 ERO1AQ96HE7 468 aa17.39■□□□□ 0.37
VEGFB-202ENST00000426086 MPHOSPH8Q99549 860 aa17.39■□□□□ 0.37
VEGFB-202ENST00000426086 KCNJ4P48050 445 aa17.38■□□□□ 0.37
VEGFB-202ENST00000426086 CNKSR2Q8WXI2 1034 aa17.38■□□□□ 0.37
VEGFB-202ENST00000426086 VEZTQ9HBM0 779 aa17.38■□□□□ 0.37
VEGFB-202ENST00000426086 PPP2R3BQ9Y5P8 575 aa17.38■□□□□ 0.37
VEGFB-202ENST00000426086 TESPA1A2RU30 521 aaPredicted RBP17.37■□□□□ 0.37
VEGFB-202ENST00000426086 CALD1Q05682 793 aaKnown RBP17.37■□□□□ 0.37
VEGFB-202ENST00000426086 RASA3Q14644 834 aa17.37■□□□□ 0.37
VEGFB-202ENST00000426086 C15orf52Q6ZUT6 534 aaKnown RBP17.37■□□□□ 0.37
VEGFB-202ENST00000426086 MS4A4AQ96JQ5 239 aa17.37■□□□□ 0.37
VEGFB-202ENST00000426086 EFCC1Q9HA90 598 aa17.37■□□□□ 0.37
VEGFB-202ENST00000426086 HTTP42858 3142 aa17.37■□□□□ 0.37
VEGFB-202ENST00000426086 IL1R1P14778 569 aa17.36■□□□□ 0.37
VEGFB-202ENST00000426086 SP3Q02447 781 aa17.36■□□□□ 0.37
VEGFB-202ENST00000426086 ELP3Q9H9T3 547 aa17.36■□□□□ 0.37
VEGFB-202ENST00000426086 SLC4A2P04920 1241 aa17.35■□□□□ 0.37
VEGFB-202ENST00000426086 SUPT20HL1Q3ZLR7 823 aa17.35■□□□□ 0.37
VEGFB-202ENST00000426086 ANKRD13AQ8IZ07 590 aa17.35■□□□□ 0.37
VEGFB-202ENST00000426086 OPTNQ96CV9 577 aa17.35■□□□□ 0.37
VEGFB-202ENST00000426086 STK31Q9BXU1 1019 aa17.35■□□□□ 0.37
VEGFB-202ENST00000426086 ZSWIM8A7E2V4 1837 aa17.35■□□□□ 0.37
VEGFB-202ENST00000426086 KIAA0100Q14667 2235 aaKnown RBP17.35■□□□□ 0.37
VEGFB-202ENST00000426086 ANKRD18BA2A2Z9 1011 aa17.34■□□□□ 0.37
VEGFB-202ENST00000426086 MKI67P46013 3256 aaKnown RBP17.34■□□□□ 0.37
VEGFB-202ENST00000426086 IREB2P48200 963 aaKnown RBP17.34■□□□□ 0.37
VEGFB-202ENST00000426086 FOXO4P98177 505 aa17.34■□□□□ 0.37
VEGFB-202ENST00000426086 TWISTNBQ3B726 338 aaPredicted RBP17.34■□□□□ 0.37
VEGFB-202ENST00000426086 BRI3BPQ8WY22 251 aa17.34■□□□□ 0.37
VEGFB-202ENST00000426086 ZNF333Q96JL9 665 aa17.34■□□□□ 0.37
VEGFB-202ENST00000426086 PRKRIP1Q9H875 184 aaPredicted RBP17.34■□□□□ 0.37
VEGFB-202ENST00000426086 COLQQ9Y215 455 aaPredicted RBP17.34■□□□□ 0.37
VEGFB-202ENST00000426086 PTCH2Q9Y6C5 1203 aa17.34■□□□□ 0.37
VEGFB-202ENST00000426086 UNCXA6NJT0 531 aa17.33■□□□□ 0.36
VEGFB-202ENST00000426086 MYO1BO43795 1136 aa17.33■□□□□ 0.36
VEGFB-202ENST00000426086 RBM5P52756 815 aaKnown RBP eCLIP17.33■□□□□ 0.36
VEGFB-202ENST00000426086 FKBP1AP62942 108 aaKnown RBP17.33■□□□□ 0.36
VEGFB-202ENST00000426086 FLIIQ13045 1269 aa17.33■□□□□ 0.36
VEGFB-202ENST00000426086 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.33■□□□□ 0.36
VEGFB-202ENST00000426086 ZNF594Q96JF6 807 aaPredicted RBP17.33■□□□□ 0.36
VEGFB-202ENST00000426086 TEPSINQ96N21 525 aa17.33■□□□□ 0.36
VEGFB-202ENST00000426086 TDRD3Q9H7E2 651 aaKnown RBP17.33■□□□□ 0.36
VEGFB-202ENST00000426086 MYCP01106 439 aaPredicted RBP17.32■□□□□ 0.36
VEGFB-202ENST00000426086 EPHA10Q5JZY3 1008 aa17.32■□□□□ 0.36
VEGFB-202ENST00000426086 OTUD7BQ6GQQ9 843 aa17.32■□□□□ 0.36
VEGFB-202ENST00000426086 ZNF804AQ7Z570 1209 aa17.32■□□□□ 0.36
VEGFB-202ENST00000426086 FAM43AQ8N2R8 423 aa17.32■□□□□ 0.36
VEGFB-202ENST00000426086 DNAAF4Q8WXU2 420 aa17.32■□□□□ 0.36
VEGFB-202ENST00000426086 ZNF70Q9UC06 446 aaPredicted RBP17.32■□□□□ 0.36
VEGFB-202ENST00000426086 PLIN1O60240 522 aa17.31■□□□□ 0.36
VEGFB-202ENST00000426086 SPDYE2Q495Y8 402 aa17.31■□□□□ 0.36
VEGFB-202ENST00000426086 LINS1Q8NG48 757 aa17.31■□□□□ 0.36
VEGFB-202ENST00000426086 CHMP4AQ9BY43 222 aa17.31■□□□□ 0.36
VEGFB-202ENST00000426086 ARHGAP39Q9C0H5 1083 aa17.31■□□□□ 0.36
VEGFB-202ENST00000426086 FKBP5Q13451 457 aaPredicted RBP17.3■□□□□ 0.36
VEGFB-202ENST00000426086 TAF1CQ15572 869 aaPredicted RBP17.3■□□□□ 0.36
VEGFB-202ENST00000426086 GRIK5Q16478 980 aa17.3■□□□□ 0.36
VEGFB-202ENST00000426086 TMEM106CQ9BVX2 250 aa17.3■□□□□ 0.36
VEGFB-202ENST00000426086 MYH16Q9H6N6 1097 aa17.3■□□□□ 0.36
VEGFB-202ENST00000426086 CHMP3Q9Y3E7 222 aa17.3■□□□□ 0.36
VEGFB-202ENST00000426086 CCL15-CCL14A0A0B4J2E2 113 aa17.29■□□□□ 0.36
VEGFB-202ENST00000426086 TCP10L2B9ZVM9 353 aa17.29■□□□□ 0.36
VEGFB-202ENST00000426086 F6X3S4 739 aa17.29■□□□□ 0.36
VEGFB-202ENST00000426086 IFIT5Q13325 482 aaKnown RBP17.29■□□□□ 0.36
VEGFB-202ENST00000426086 VGLL4Q14135 290 aa17.29■□□□□ 0.36
VEGFB-202ENST00000426086 CCL15Q16663 113 aa17.29■□□□□ 0.36
VEGFB-202ENST00000426086 CCDC184Q52MB2 194 aa17.29■□□□□ 0.36
VEGFB-202ENST00000426086 TMEM39BQ9GZU3 492 aa17.29■□□□□ 0.36
VEGFB-202ENST00000426086 FAM205AQ6ZU69 1335 aa17.28■□□□□ 0.36
VEGFB-202ENST00000426086 ARAP2Q8WZ64 1704 aa17.28■□□□□ 0.36
VEGFB-202ENST00000426086 GYG1P46976 350 aa17.28■□□□□ 0.36
VEGFB-202ENST00000426086 SLC9C1Q4G0N8 1177 aa17.28■□□□□ 0.36
VEGFB-202ENST00000426086 MFSD14BQ5SR56 506 aa17.28■□□□□ 0.36
VEGFB-202ENST00000426086 LMBR1LQ6UX01 489 aa17.28■□□□□ 0.36
VEGFB-202ENST00000426086 WWC1Q8IX03 1113 aa17.28■□□□□ 0.36
VEGFB-202ENST00000426086 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms