RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 MAP3K12Q12852 859 aa18.18■□□□□ 0.5
ACTB-204ENST00000425660 CUL4AQ13619 759 aa18.18■□□□□ 0.5
ACTB-204ENST00000425660 KRT32Q14532 448 aa18.18■□□□□ 0.5
ACTB-204ENST00000425660 RUFY3Q7L099 469 aa18.18■□□□□ 0.5
ACTB-204ENST00000425660 RBM17Q96I25 401 aaKnown RBP18.18■□□□□ 0.5
ACTB-204ENST00000425660 CRAMP1Q96RY5 1269 aa18.18■□□□□ 0.5
ACTB-204ENST00000425660 BRIP1Q9BX63 1249 aa18.18■□□□□ 0.5
ACTB-204ENST00000425660 FOXP2O15409 715 aa18.17■□□□□ 0.5
ACTB-204ENST00000425660 CYP21A2P08686 494 aa18.17■□□□□ 0.5
ACTB-204ENST00000425660 SLC15A2Q16348 729 aa18.17■□□□□ 0.5
ACTB-204ENST00000425660 LEMD3Q9Y2U8 911 aa18.17■□□□□ 0.5
ACTB-204ENST00000425660 CYP46A1Q9Y6A2 500 aa18.17■□□□□ 0.5
ACTB-204ENST00000425660 COL1A1P02452 1464 aaPredicted RBP18.17■□□□□ 0.5
ACTB-204ENST00000425660 ZNF532Q9HCE3 1301 aa18.16■□□□□ 0.5
ACTB-204ENST00000425660 BBOX1O75936 387 aa18.16■□□□□ 0.5
ACTB-204ENST00000425660 ANO8Q9HCE9 1232 aaPredicted RBP18.16■□□□□ 0.5
ACTB-204ENST00000425660 WWC3Q9ULE0 1092 aa18.16■□□□□ 0.5
ACTB-204ENST00000425660 TAF6LQ9Y6J9 622 aa18.16■□□□□ 0.5
ACTB-204ENST00000425660 XDHP47989 1333 aa18.16■□□□□ 0.5
ACTB-204ENST00000425660 GPAA1O43292 621 aa18.16■□□□□ 0.5
ACTB-204ENST00000425660 KLRK1P26718 216 aa18.16■□□□□ 0.5
ACTB-204ENST00000425660 ALDH8A1Q9H2A2 487 aaPredicted RBP18.16■□□□□ 0.5
ACTB-204ENST00000425660 DENND2AQ9ULE3 1009 aa18.16■□□□□ 0.5
ACTB-204ENST00000425660 MMP10P09238 476 aa18.15■□□□□ 0.5
ACTB-204ENST00000425660 BAG6P46379 1132 aa18.15■□□□□ 0.5
ACTB-204ENST00000425660 AK2P54819 239 aa18.15■□□□□ 0.5
ACTB-204ENST00000425660 C15orf52Q6ZUT6 534 aaKnown RBP18.15■□□□□ 0.5
ACTB-204ENST00000425660 VPS37DQ86XT2 251 aa18.15■□□□□ 0.5
ACTB-204ENST00000425660 INTS4Q96HW7 963 aaKnown RBP18.15■□□□□ 0.5
ACTB-204ENST00000425660 CWC22Q9HCG8 908 aaKnown RBP18.15■□□□□ 0.5
ACTB-204ENST00000425660 QSER1Q2KHR3 1735 aa18.15■□□□□ 0.5
ACTB-204ENST00000425660 HIBADHP31937 336 aaKnown RBP18.14■□□□□ 0.5
ACTB-204ENST00000425660 TMC4Q7Z404 712 aa18.14■□□□□ 0.5
ACTB-204ENST00000425660 ANKRD31Q8N7Z5 1873 aa18.14■□□□□ 0.49
ACTB-204ENST00000425660 MYO5AQ9Y4I1 1855 aaKnown RBP18.14■□□□□ 0.49
ACTB-204ENST00000425660 PDRG1Q9NUG6 133 aa18.14■□□□□ 0.49
ACTB-204ENST00000425660 ANKIB1Q9P2G1 1089 aa18.14■□□□□ 0.49
ACTB-204ENST00000425660 CTNNA3Q9UI47 895 aa18.14■□□□□ 0.49
ACTB-204ENST00000425660 LIMCH1Q9UPQ0 1083 aa18.14■□□□□ 0.49
ACTB-204ENST00000425660 SRGNP10124 158 aa18.13■□□□□ 0.49
ACTB-204ENST00000425660 CPA1P15085 419 aa18.13■□□□□ 0.49
ACTB-204ENST00000425660 RPS6KB1P23443 525 aa18.13■□□□□ 0.49
ACTB-204ENST00000425660 NFKBIBQ15653 356 aa18.13■□□□□ 0.49
ACTB-204ENST00000425660 BLOC1S2Q6QNY1 142 aa18.13■□□□□ 0.49
ACTB-204ENST00000425660 MAGEB6Q8N7X4 407 aa18.13■□□□□ 0.49
ACTB-204ENST00000425660 PODXL2Q9NZ53 605 aa18.13■□□□□ 0.49
ACTB-204ENST00000425660 PARP3Q9Y6F1 533 aa18.13■□□□□ 0.49
ACTB-204ENST00000425660 TXNRD3Q86VQ6 643 aa18.12■□□□□ 0.49
ACTB-204ENST00000425660 NEK1Q96PY6 1258 aa18.12■□□□□ 0.49
ACTB-204ENST00000425660 STK32BQ9NY57 414 aa18.12■□□□□ 0.49
ACTB-204ENST00000425660 LRRC37AA6NMS7 1700 aa18.12■□□□□ 0.49
ACTB-204ENST00000425660 FGAP02671 866 aa18.12■□□□□ 0.49
ACTB-204ENST00000425660 HMGB1P09429 215 aaKnown RBP18.12■□□□□ 0.49
ACTB-204ENST00000425660 COL9A3Q14050 684 aaPredicted RBP18.12■□□□□ 0.49
ACTB-204ENST00000425660 STRBPQ96SI9 672 aaKnown RBP18.12■□□□□ 0.49
ACTB-204ENST00000425660 FOXD4L1Q9NU39 408 aa18.12■□□□□ 0.49
ACTB-204ENST00000425660 LRP2BPQ9P2M1 347 aa18.12■□□□□ 0.49
ACTB-204ENST00000425660 IQSEC3Q9UPP2 1182 aaPredicted RBP18.12■□□□□ 0.49
ACTB-204ENST00000425660 IGSF3O75054 1194 aa18.11■□□□□ 0.49
ACTB-204ENST00000425660 PDE6BP35913 854 aa18.11■□□□□ 0.49
ACTB-204ENST00000425660 TMED8Q6PL24 325 aaPredicted RBP18.11■□□□□ 0.49
ACTB-204ENST00000425660 SLC51AQ86UW1 340 aa18.11■□□□□ 0.49
ACTB-204ENST00000425660 ZGPATQ8N5A5 531 aaKnown RBP18.11■□□□□ 0.49
ACTB-204ENST00000425660 ZMYM6O95789 1325 aa18.1■□□□□ 0.49
ACTB-204ENST00000425660 NPR1P16066 1061 aa18.1■□□□□ 0.49
ACTB-204ENST00000425660 ATP2B4P23634 1241 aa18.1■□□□□ 0.49
ACTB-204ENST00000425660 GPSM2P81274 684 aa18.1■□□□□ 0.49
ACTB-204ENST00000425660 RAB3GAP1Q15042 981 aa18.1■□□□□ 0.49
ACTB-204ENST00000425660 ANKRD1Q15327 319 aa18.1■□□□□ 0.49
ACTB-204ENST00000425660 STOX1Q6ZVD7 989 aa18.1■□□□□ 0.49
ACTB-204ENST00000425660 CCDC125Q86Z20 511 aa18.1■□□□□ 0.49
ACTB-204ENST00000425660 AIDAQ96BJ3 306 aa18.1■□□□□ 0.49
ACTB-204ENST00000425660 NBR1Q14596 966 aa18.09■□□□□ 0.49
ACTB-204ENST00000425660 ZSCAN31Q96LW9 406 aaPredicted RBP18.09■□□□□ 0.49
ACTB-204ENST00000425660 LTBP1Q14766 1721 aa18.09■□□□□ 0.49
ACTB-204ENST00000425660 ALX1Q15699 326 aa18.09■□□□□ 0.49
ACTB-204ENST00000425660 IMMTQ16891 758 aaKnown RBP18.09■□□□□ 0.49
ACTB-204ENST00000425660 TTLL5Q6EMB2 1281 aa18.09■□□□□ 0.49
ACTB-204ENST00000425660 NOL8Q76FK4 1167 aaKnown RBP18.09■□□□□ 0.49
ACTB-204ENST00000425660 SP8Q8IXZ3 490 aa18.09■□□□□ 0.49
ACTB-204ENST00000425660 SH2B1Q9NRF2 756 aaPredicted RBP18.09■□□□□ 0.49
ACTB-204ENST00000425660 ABCF2Q9UG63 623 aa18.09■□□□□ 0.49
ACTB-204ENST00000425660 NSFL1CQ9UNZ2 370 aaKnown RBP18.09■□□□□ 0.49
ACTB-204ENST00000425660 E7EWF7 191 aa18.08■□□□□ 0.48
ACTB-204ENST00000425660 MSL1Q68DK7 614 aa18.08■□□□□ 0.48
ACTB-204ENST00000425660 TDRD7Q8NHU6 1098 aaKnown RBP18.08■□□□□ 0.48
ACTB-204ENST00000425660 GGA1Q9UJY5 639 aa18.08■□□□□ 0.48
ACTB-204ENST00000425660 ATP6V0A2Q9Y487 856 aa18.08■□□□□ 0.48
ACTB-204ENST00000425660 SALL1Q9NSC2 1324 aa18.08■□□□□ 0.48
ACTB-204ENST00000425660 CACNA1SQ13698 1873 aa18.08■□□□□ 0.48
ACTB-204ENST00000425660 A0A0G2JLW4 131 aa18.07■□□□□ 0.48
ACTB-204ENST00000425660 PPEF1O14829 653 aaPredicted RBP18.07■□□□□ 0.48
ACTB-204ENST00000425660 FRAT2O75474 233 aaPredicted RBP18.07■□□□□ 0.48
ACTB-204ENST00000425660 GNAT2P19087 354 aa18.07■□□□□ 0.48
ACTB-204ENST00000425660 ALDH1B1P30837 517 aa18.07■□□□□ 0.48
ACTB-204ENST00000425660 TOB2Q14106 344 aaPredicted RBP18.07■□□□□ 0.48
ACTB-204ENST00000425660 PATL2C9JE40 543 aaKnown RBP18.07■□□□□ 0.48
ACTB-204ENST00000425660 MBD4O95243 580 aa18.07■□□□□ 0.48
ACTB-204ENST00000425660 NUCB2P80303 420 aa18.07■□□□□ 0.48
ACTB-204ENST00000425660 DHX32Q7L7V1 743 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms