RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 A0A0G2JLW4 131 aa13.04□□□□□ -0.32
SEC61A1-202ENST00000424880 UBASH3AP57075 661 aa13.04□□□□□ -0.32
SEC61A1-202ENST00000424880 SF3A1Q15459 793 aaKnown RBP13.04□□□□□ -0.32
SEC61A1-202ENST00000424880 CCDC12Q8WUD4 166 aaPredicted RBP13.04□□□□□ -0.32
SEC61A1-202ENST00000424880 PNKPQ96T60 521 aa13.04□□□□□ -0.32
SEC61A1-202ENST00000424880 PSD3Q9NYI0 1048 aa13.04□□□□□ -0.32
SEC61A1-202ENST00000424880 BCCIPQ9P287 314 aaKnown RBP eCLIP13.04□□□□□ -0.32
SEC61A1-202ENST00000424880 USP6P35125 1406 aa13.04□□□□□ -0.32
SEC61A1-202ENST00000424880 PLEKHG2Q9H7P9 1386 aa13.04□□□□□ -0.32
SEC61A1-202ENST00000424880 APOBRQ0VD83 1088 aa13.04□□□□□ -0.32
SEC61A1-202ENST00000424880 CCDC150Q8NCX0 1101 aa13.04□□□□□ -0.32
SEC61A1-202ENST00000424880 ENGASEQ8NFI3 743 aa13.04□□□□□ -0.32
SEC61A1-202ENST00000424880 EXOC4Q96A65 974 aa13.04□□□□□ -0.32
SEC61A1-202ENST00000424880 ECHDC1Q9NTX5 307 aa13.04□□□□□ -0.32
SEC61A1-202ENST00000424880 PPP2R2CQ9Y2T4 447 aa13.04□□□□□ -0.32
SEC61A1-202ENST00000424880 NWD1Q149M9 1564 aa13.04□□□□□ -0.32
SEC61A1-202ENST00000424880 PI4KAP2A4QPH2 592 aa13.03□□□□□ -0.32
SEC61A1-202ENST00000424880 NRDCO43847 1150 aa13.03□□□□□ -0.32
SEC61A1-202ENST00000424880 PSMA5P28066 241 aa13.03□□□□□ -0.32
SEC61A1-202ENST00000424880 DNAJC21Q5F1R6 531 aaKnown RBP13.03□□□□□ -0.32
SEC61A1-202ENST00000424880 PI4KAP1Q8N8J0 262 aa13.03□□□□□ -0.32
SEC61A1-202ENST00000424880 TM6SF1Q9BZW5 370 aa13.03□□□□□ -0.32
SEC61A1-202ENST00000424880 ITSN1Q15811 1721 aa13.03□□□□□ -0.32
SEC61A1-202ENST00000424880 CAVIN2O95810 425 aa13.03□□□□□ -0.32
SEC61A1-202ENST00000424880 MARCKSP29966 332 aaPredicted RBP13.03□□□□□ -0.32
SEC61A1-202ENST00000424880 MTX1Q13505 466 aa13.03□□□□□ -0.32
SEC61A1-202ENST00000424880 RIN2Q8WYP3 895 aaPredicted RBP13.03□□□□□ -0.32
SEC61A1-202ENST00000424880 LTV1Q96GA3 475 aaPredicted RBP13.03□□□□□ -0.32
SEC61A1-202ENST00000424880 DEF6Q9H4E7 631 aa13.03□□□□□ -0.32
SEC61A1-202ENST00000424880 CLIC4Q9Y696 253 aa13.03□□□□□ -0.32
SEC61A1-202ENST00000424880 RGPD8O14715 1765 aaPredicted RBP13.03□□□□□ -0.32
SEC61A1-202ENST00000424880 XRN1Q8IZH2 1706 aaKnown RBP13.03□□□□□ -0.32
SEC61A1-202ENST00000424880 PPARDQ03181 441 aa13.03□□□□□ -0.32
SEC61A1-202ENST00000424880 HDGFL1Q5TGJ6 251 aa13.03□□□□□ -0.32
SEC61A1-202ENST00000424880 GPR161Q8N6U8 529 aaKnown RBP13.03□□□□□ -0.32
SEC61A1-202ENST00000424880 ABCB6Q9NP58 842 aa13.03□□□□□ -0.32
SEC61A1-202ENST00000424880 KIAA1468Q9P260 1216 aa13.03□□□□□ -0.32
SEC61A1-202ENST00000424880 NRKQ7Z2Y5 1582 aa13.03□□□□□ -0.32
SEC61A1-202ENST00000424880 TEFQ10587 303 aa13.02□□□□□ -0.32
SEC61A1-202ENST00000424880 CPLX3Q8WVH0 158 aa13.02□□□□□ -0.32
SEC61A1-202ENST00000424880 MAP3K19Q56UN5 1328 aa13.02□□□□□ -0.32
SEC61A1-202ENST00000424880 PHLPP2Q6ZVD8 1323 aa13.02□□□□□ -0.32
SEC61A1-202ENST00000424880 MAGEA9P43362 315 aa13.02□□□□□ -0.33
SEC61A1-202ENST00000424880 LIG3P49916 1009 aa13.02□□□□□ -0.33
SEC61A1-202ENST00000424880 NCAPHQ15003 741 aa13.02□□□□□ -0.33
SEC61A1-202ENST00000424880 NOM1Q5C9Z4 860 aaKnown RBP13.02□□□□□ -0.33
SEC61A1-202ENST00000424880 ANKLE2Q86XL3 938 aa13.02□□□□□ -0.33
SEC61A1-202ENST00000424880 FANCLQ9NW38 375 aa13.02□□□□□ -0.33
SEC61A1-202ENST00000424880 DIP2AQ14689 1571 aa13.02□□□□□ -0.33
SEC61A1-202ENST00000424880 LRRC31Q6UY01 552 aa13.01□□□□□ -0.33
SEC61A1-202ENST00000424880 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.01□□□□□ -0.33
SEC61A1-202ENST00000424880 ILDR1Q86SU0 546 aaPredicted RBP13.01□□□□□ -0.33
SEC61A1-202ENST00000424880 IMPACTQ9P2X3 320 aa13.01□□□□□ -0.33
SEC61A1-202ENST00000424880 OVOS2A0A0J9YW53 1432 aa13.01□□□□□ -0.33
SEC61A1-202ENST00000424880 OVOS2Q6IE36 1432 aa13.01□□□□□ -0.33
SEC61A1-202ENST00000424880 ATP2B1P20020 1258 aa13.01□□□□□ -0.33
SEC61A1-202ENST00000424880 TTC19Q6DKK2 380 aaPredicted RBP13.01□□□□□ -0.33
SEC61A1-202ENST00000424880 DHX37Q8IY37 1157 aaKnown RBP13.01□□□□□ -0.33
SEC61A1-202ENST00000424880 FMR1NBQ8N0W7 255 aaPredicted RBP13.01□□□□□ -0.33
SEC61A1-202ENST00000424880 CNNM3Q8NE01 707 aa13.01□□□□□ -0.33
SEC61A1-202ENST00000424880 CERKQ8TCT0 537 aa13.01□□□□□ -0.33
SEC61A1-202ENST00000424880 EAF2Q96CJ1 260 aaPredicted RBP13.01□□□□□ -0.33
SEC61A1-202ENST00000424880 RCOR1Q9UKL0 485 aa13.01□□□□□ -0.33
SEC61A1-202ENST00000424880 PTPDC1A2A3K4 754 aa13.01□□□□□ -0.33
SEC61A1-202ENST00000424880 CTAGE5O15320 804 aa13.01□□□□□ -0.33
SEC61A1-202ENST00000424880 WDHD1O75717 1129 aaPredicted RBP13.01□□□□□ -0.33
SEC61A1-202ENST00000424880 TOP1P11387 765 aaKnown RBP13.01□□□□□ -0.33
SEC61A1-202ENST00000424880 MAP3K9P80192 1104 aa13.01□□□□□ -0.33
SEC61A1-202ENST00000424880 FBXW10Q5XX13 1052 aa13.01□□□□□ -0.33
SEC61A1-202ENST00000424880 MRFAP1Q9Y605 127 aa13.01□□□□□ -0.33
SEC61A1-202ENST00000424880 AOX1Q06278 1338 aa13.01□□□□□ -0.33
SEC61A1-202ENST00000424880 CRB1P82279 1406 aa13□□□□□ -0.33
SEC61A1-202ENST00000424880 ABL1P00519 1130 aa13□□□□□ -0.33
SEC61A1-202ENST00000424880 SLC3A2P08195 630 aaKnown RBP13□□□□□ -0.33
SEC61A1-202ENST00000424880 CWF19L2Q2TBE0 894 aaKnown RBP13□□□□□ -0.33
SEC61A1-202ENST00000424880 CLIC6Q96NY7 704 aa13□□□□□ -0.33
SEC61A1-202ENST00000424880 EHD4Q9H223 541 aa13□□□□□ -0.33
SEC61A1-202ENST00000424880 GPHNQ9NQX3 736 aaPredicted RBP13□□□□□ -0.33
SEC61A1-202ENST00000424880 CTDNEP1O95476 244 aa13□□□□□ -0.33
SEC61A1-202ENST00000424880 POLA2Q14181 598 aa13□□□□□ -0.33
SEC61A1-202ENST00000424880 MRPS27Q92552 414 aaKnown RBP13□□□□□ -0.33
SEC61A1-202ENST00000424880 NEK1Q96PY6 1258 aa13□□□□□ -0.33
SEC61A1-202ENST00000424880 HSD3B7Q9H2F3 369 aa13□□□□□ -0.33
SEC61A1-202ENST00000424880 FAM204AQ9H8W3 233 aa13□□□□□ -0.33
SEC61A1-202ENST00000424880 POLD4Q9HCU8 107 aa13□□□□□ -0.33
SEC61A1-202ENST00000424880 RSRC2Q7L4I2 434 aaKnown RBP13□□□□□ -0.33
SEC61A1-202ENST00000424880 EVI5LQ96CN4 794 aa13□□□□□ -0.33
SEC61A1-202ENST00000424880 MRPL44Q9H9J2 332 aaKnown RBP13□□□□□ -0.33
SEC61A1-202ENST00000424880 CEP83Q9Y592 693 aa13□□□□□ -0.33
SEC61A1-202ENST00000424880 ZMYND10O75800 440 aa12.99□□□□□ -0.33
SEC61A1-202ENST00000424880 TXLNAP40222 546 aa12.99□□□□□ -0.33
SEC61A1-202ENST00000424880 MNAT1P51948 309 aa12.99□□□□□ -0.33
SEC61A1-202ENST00000424880 CHMP4BP1P59074 171 aa12.99□□□□□ -0.33
SEC61A1-202ENST00000424880 STK38Q15208 465 aa12.99□□□□□ -0.33
SEC61A1-202ENST00000424880 ERC1Q8IUD2 1116 aa12.99□□□□□ -0.33
SEC61A1-202ENST00000424880 NGDNQ8NEJ9 315 aaKnown RBP12.99□□□□□ -0.33
SEC61A1-202ENST00000424880 GOLGA1Q92805 767 aa12.99□□□□□ -0.33
SEC61A1-202ENST00000424880 ANKZF1Q9H8Y5 726 aa12.99□□□□□ -0.33
SEC61A1-202ENST00000424880 TTC41PQ6P2S7 1318 aa12.99□□□□□ -0.33
SEC61A1-202ENST00000424880 ECM2O94769 699 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms