RNA–Protein interactions for RNA: ENST00000423035.5

PGAP1-206, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 1 (best)

Gene PGAP1, Length 8,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-206ENST00000423035 PBXIP1Q96AQ6 731 aa4.97□□□□□ -1.61
PGAP1-206ENST00000423035 CHPF2Q9P2E5 772 aa4.97□□□□□ -1.61
PGAP1-206ENST00000423035 DDX49Q9Y6V7 483 aaKnown RBP4.97□□□□□ -1.61
PGAP1-206ENST00000423035 CALCOCO2Q13137 446 aa4.97□□□□□ -1.61
PGAP1-206ENST00000423035 STX12Q86Y82 276 aa4.97□□□□□ -1.61
PGAP1-206ENST00000423035 MRPL46Q9H2W6 279 aaKnown RBP4.97□□□□□ -1.61
PGAP1-206ENST00000423035 CTNNA3Q9UI47 895 aa4.97□□□□□ -1.61
PGAP1-206ENST00000423035 RASSF10A6NK89 507 aa4.97□□□□□ -1.61
PGAP1-206ENST00000423035 EEF2P13639 858 aaKnown RBP4.97□□□□□ -1.61
PGAP1-206ENST00000423035 TXLNAP40222 546 aa4.97□□□□□ -1.61
PGAP1-206ENST00000423035 TAB3Q8N5C8 712 aaPredicted RBP4.97□□□□□ -1.61
PGAP1-206ENST00000423035 HELBQ8NG08 1087 aaPredicted RBP4.97□□□□□ -1.61
PGAP1-206ENST00000423035 CFDP1Q9UEE9 299 aaPredicted RBP4.97□□□□□ -1.61
PGAP1-206ENST00000423035 EZRP15311 586 aaKnown RBP4.97□□□□□ -1.61
PGAP1-206ENST00000423035 MSR1P21757 451 aa4.97□□□□□ -1.61
PGAP1-206ENST00000423035 NOP2P46087 812 aaKnown RBP4.97□□□□□ -1.61
PGAP1-206ENST00000423035 PPP2R5CQ13362 524 aa4.97□□□□□ -1.61
PGAP1-206ENST00000423035 CCDC38Q502W7 563 aa4.97□□□□□ -1.61
PGAP1-206ENST00000423035 IFT74Q96LB3 600 aa4.97□□□□□ -1.61
PGAP1-206ENST00000423035 ITM2BQ9Y287 266 aa4.97□□□□□ -1.61
PGAP1-206ENST00000423035 REREQ9P2R6 1566 aa4.97□□□□□ -1.61
PGAP1-206ENST00000423035 F5H423 210 aaPredicted RBP4.97□□□□□ -1.61
PGAP1-206ENST00000423035 CUL4BQ13620 913 aa4.97□□□□□ -1.61
PGAP1-206ENST00000423035 CCDC122Q5T0U0 273 aa4.97□□□□□ -1.61
PGAP1-206ENST00000423035 LMNTD2Q8IXW0 634 aa4.97□□□□□ -1.61
PGAP1-206ENST00000423035 ST13P5Q8NFI4 369 aaPredicted RBP4.97□□□□□ -1.61
PGAP1-206ENST00000423035 BTN2A2Q8WVV5 523 aa4.97□□□□□ -1.61
PGAP1-206ENST00000423035 TRIM7Q9C029 511 aa4.97□□□□□ -1.61
PGAP1-206ENST00000423035 FTOQ9C0B1 505 aaKnown RBP eCLIP4.97□□□□□ -1.61
PGAP1-206ENST00000423035 DDX28Q9NUL7 540 aaKnown RBP4.97□□□□□ -1.61
PGAP1-206ENST00000423035 ARHGAP5Q13017 1502 aa4.97□□□□□ -1.61
PGAP1-206ENST00000423035 TRIM32Q13049 653 aa4.97□□□□□ -1.61
PGAP1-206ENST00000423035 EIF2B5Q13144 721 aaKnown RBP4.97□□□□□ -1.61
PGAP1-206ENST00000423035 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.97□□□□□ -1.61
PGAP1-206ENST00000423035 CSRNP2Q9H175 543 aa4.97□□□□□ -1.61
PGAP1-206ENST00000423035 MIA2Q96PC5 1412 aa4.96□□□□□ -1.61
PGAP1-206ENST00000423035 WBP4O75554 376 aaKnown RBP4.96□□□□□ -1.61
PGAP1-206ENST00000423035 PTPN14Q15678 1187 aa4.96□□□□□ -1.61
PGAP1-206ENST00000423035 CCDC96Q2M329 555 aa4.96□□□□□ -1.61
PGAP1-206ENST00000423035 C16orf87Q6PH81 154 aa4.96□□□□□ -1.61
PGAP1-206ENST00000423035 ZCWPW1Q9H0M4 648 aa4.96□□□□□ -1.61
PGAP1-206ENST00000423035 CAPN7Q9Y6W3 813 aa4.96□□□□□ -1.61
PGAP1-206ENST00000423035 HPDP32754 393 aaPredicted RBP4.96□□□□□ -1.61
PGAP1-206ENST00000423035 GEMIN4P57678 1058 aaKnown RBP4.96□□□□□ -1.61
PGAP1-206ENST00000423035 ASPHQ12797 758 aa4.96□□□□□ -1.61
PGAP1-206ENST00000423035 ELF2Q15723 593 aa4.96□□□□□ -1.61
PGAP1-206ENST00000423035 C4orf50Q6ZRC1 276 aa4.96□□□□□ -1.61
PGAP1-206ENST00000423035 MPNDQ8N594 471 aa4.96□□□□□ -1.61
PGAP1-206ENST00000423035 SLU7O95391 586 aaKnown RBP4.96□□□□□ -1.62
PGAP1-206ENST00000423035 PYGBP11216 843 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 KCNA2P16389 499 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 SNW1Q13573 536 aaKnown RBP4.96□□□□□ -1.62
PGAP1-206ENST00000423035 INAQ16352 499 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 PRR23CQ6ZRP0 262 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 TAGAPQ8N103 731 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 CASP10Q92851 521 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 ZNF594Q96JF6 807 aaPredicted RBP4.96□□□□□ -1.62
PGAP1-206ENST00000423035 SNX6Q9UNH7 406 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 DHX29Q7Z478 1369 aaKnown RBP4.96□□□□□ -1.62
PGAP1-206ENST00000423035 IQANK1A0A1B0GTG1 560 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 DIAPH1O60610 1272 aaKnown RBP4.96□□□□□ -1.62
PGAP1-206ENST00000423035 PPFIA2O75334 1257 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 MCM4P33991 863 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 PPP1R12BO60237 982 aaPredicted RBP4.96□□□□□ -1.62
PGAP1-206ENST00000423035 GRK2P25098 689 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 MRE11P49959 708 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 CCDC57Q2TAC2 916 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 RILPL1Q5EBL4 403 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 CNNM4Q6P4Q7 775 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 SMARCC2Q8TAQ2 1214 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 TTC1Q99614 292 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.96□□□□□ -1.62
PGAP1-206ENST00000423035 CIB2O75838 187 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 MMEP08473 750 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 SKAP1Q86WV1 359 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 ARHGEF1Q92888 912 aaKnown RBP4.96□□□□□ -1.62
PGAP1-206ENST00000423035 ABCC1P33527 1531 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 NEBLO76041 1014 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 INPP5BP32019 993 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 FLT3P36888 993 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 RASEFQ8IZ41 740 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 MAML3Q96JK9 1138 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 MRFAP1Q9Y605 127 aa4.96□□□□□ -1.62
PGAP1-206ENST00000423035 A2ML1A8K2U0 1454 aa4.95□□□□□ -1.62
PGAP1-206ENST00000423035 SNX1Q13596 522 aa4.95□□□□□ -1.62
PGAP1-206ENST00000423035 C21orf62-AS1Q17RA5 79 aa4.95□□□□□ -1.62
PGAP1-206ENST00000423035 LRRFIP1Q32MZ4 808 aaKnown RBP4.95□□□□□ -1.62
PGAP1-206ENST00000423035 GJC2Q5T442 439 aaPredicted RBP4.95□□□□□ -1.62
PGAP1-206ENST00000423035 RIMS1Q86UR5 1692 aaKnown RBP4.95□□□□□ -1.62
PGAP1-206ENST00000423035 JAKMIP2Q96AA8 810 aa4.95□□□□□ -1.62
PGAP1-206ENST00000423035 CHMP5Q9NZZ3 219 aa4.95□□□□□ -1.62
PGAP1-206ENST00000423035 ALKQ9UM73 1620 aa4.95□□□□□ -1.62
PGAP1-206ENST00000423035 RDH13Q8NBN7 331 aa4.95□□□□□ -1.62
PGAP1-206ENST00000423035 STMN2Q93045 179 aa4.95□□□□□ -1.62
PGAP1-206ENST00000423035 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.95□□□□□ -1.62
PGAP1-206ENST00000423035 U2AF1L5P0DN76 240 aaPredicted RBP4.95□□□□□ -1.62
PGAP1-206ENST00000423035 HAND2P61296 217 aa4.95□□□□□ -1.62
PGAP1-206ENST00000423035 U2AF1Q01081 240 aaKnown RBP eCLIP4.95□□□□□ -1.62
PGAP1-206ENST00000423035 ASIC2Q16515 512 aa4.95□□□□□ -1.62
PGAP1-206ENST00000423035 C10orf62Q5T681 223 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms