RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 LRRC24Q50LG9 513 aa13.13□□□□□ -0.31
RFC1-203ENST00000418436 CIAPIN1Q6FI81 312 aa13.13□□□□□ -0.31
RFC1-203ENST00000418436 C15orf52Q6ZUT6 534 aaKnown RBP13.13□□□□□ -0.31
RFC1-203ENST00000418436 ITPRIPQ8IWB1 547 aa13.13□□□□□ -0.31
RFC1-203ENST00000418436 HELBQ8NG08 1087 aaPredicted RBP13.13□□□□□ -0.31
RFC1-203ENST00000418436 KLHDC4Q8TBB5 520 aa13.13□□□□□ -0.31
RFC1-203ENST00000418436 DBNDD1Q9H9R9 158 aa13.13□□□□□ -0.31
RFC1-203ENST00000418436 EYA2O00167 538 aa13.12□□□□□ -0.31
RFC1-203ENST00000418436 PLIN1O60240 522 aa13.12□□□□□ -0.31
RFC1-203ENST00000418436 TXNRD3Q86VQ6 643 aa13.12□□□□□ -0.31
RFC1-203ENST00000418436 VGLL2Q8N8G2 317 aa13.12□□□□□ -0.31
RFC1-203ENST00000418436 COPRSQ9NQ92 184 aa13.12□□□□□ -0.31
RFC1-203ENST00000418436 IQCA1LA6NCM1 817 aa13.11□□□□□ -0.31
RFC1-203ENST00000418436 SNAP23O00161 211 aa13.11□□□□□ -0.31
RFC1-203ENST00000418436 RAD17O75943 681 aa13.11□□□□□ -0.31
RFC1-203ENST00000418436 CIAO1O76071 339 aa13.11□□□□□ -0.31
RFC1-203ENST00000418436 TOMM70O94826 608 aa13.11□□□□□ -0.31
RFC1-203ENST00000418436 KLRK1P26718 216 aa13.11□□□□□ -0.31
RFC1-203ENST00000418436 UBE4AQ14139 1066 aa13.11□□□□□ -0.31
RFC1-203ENST00000418436 PDE3AQ14432 1141 aa13.11□□□□□ -0.31
RFC1-203ENST00000418436 MVPQ14764 893 aaKnown RBP13.11□□□□□ -0.31
RFC1-203ENST00000418436 TNIP1Q15025 636 aa13.11□□□□□ -0.31
RFC1-203ENST00000418436 ATG9AQ7Z3C6 839 aa13.11□□□□□ -0.31
RFC1-203ENST00000418436 PODNQ7Z5L7 613 aa13.11□□□□□ -0.31
RFC1-203ENST00000418436 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.11□□□□□ -0.31
RFC1-203ENST00000418436 KCNQ5Q9NR82 932 aa13.11□□□□□ -0.31
RFC1-203ENST00000418436 PCDH10Q9P2E7 1040 aa13.11□□□□□ -0.31
RFC1-203ENST00000418436 GJA3Q9Y6H8 435 aa13.11□□□□□ -0.31
RFC1-203ENST00000418436 SRGAP3O43295 1099 aa13.1□□□□□ -0.31
RFC1-203ENST00000418436 PDE8BO95263 885 aa13.1□□□□□ -0.31
RFC1-203ENST00000418436 KCNJ4P48050 445 aa13.1□□□□□ -0.31
RFC1-203ENST00000418436 SCNN1DP51172 638 aa13.1□□□□□ -0.31
RFC1-203ENST00000418436 COA1Q9GZY4 146 aa13.1□□□□□ -0.31
RFC1-203ENST00000418436 HACL1Q9UJ83 578 aa13.1□□□□□ -0.31
RFC1-203ENST00000418436 ADAMTSL1Q8N6G6 1762 aa13.09□□□□□ -0.31
RFC1-203ENST00000418436 PNMA6EA0A0J9YXQ4 647 aa13.09□□□□□ -0.31
RFC1-203ENST00000418436 PSMD14O00487 310 aa13.09□□□□□ -0.31
RFC1-203ENST00000418436 ZNF609O15014 1411 aa13.09□□□□□ -0.31
RFC1-203ENST00000418436 VIL1P09327 827 aaKnown RBP13.09□□□□□ -0.31
RFC1-203ENST00000418436 C1QTNF8P60827 252 aa13.09□□□□□ -0.31
RFC1-203ENST00000418436 ATP8B2P98198 1209 aa13.09□□□□□ -0.31
RFC1-203ENST00000418436 METTL24Q5JXM2 366 aa13.09□□□□□ -0.31
RFC1-203ENST00000418436 C20orf194Q5TEA3 1177 aa13.09□□□□□ -0.31
RFC1-203ENST00000418436 RBM46Q8TBY0 533 aaKnown RBP13.09□□□□□ -0.31
RFC1-203ENST00000418436 TAF1DQ9H5J8 278 aaPredicted RBP13.09□□□□□ -0.31
RFC1-203ENST00000418436 DDX19BQ9UMR2 479 aa13.09□□□□□ -0.31
RFC1-203ENST00000418436 PA2G4Q9UQ80 394 aaKnown RBP13.09□□□□□ -0.31
RFC1-203ENST00000418436 COG6Q9Y2V7 657 aa13.09□□□□□ -0.31
RFC1-203ENST00000418436 FGFR2P21802 821 aa13.08□□□□□ -0.32
RFC1-203ENST00000418436 EPHX2P34913 555 aa13.08□□□□□ -0.32
RFC1-203ENST00000418436 IL15P40933 162 aaPredicted RBP13.08□□□□□ -0.32
RFC1-203ENST00000418436 GMPSP49915 693 aaPredicted RBP13.08□□□□□ -0.32
RFC1-203ENST00000418436 C16orf71Q8IYS4 520 aaPredicted RBP13.08□□□□□ -0.32
RFC1-203ENST00000418436 SSH3Q8TE77 659 aa13.08□□□□□ -0.32
RFC1-203ENST00000418436 DPF2Q92785 391 aa13.08□□□□□ -0.32
RFC1-203ENST00000418436 C1orf115Q9H7X2 142 aa13.08□□□□□ -0.32
RFC1-203ENST00000418436 CD209Q9NNX6 404 aa13.08□□□□□ -0.32
RFC1-203ENST00000418436 RYDENQ9NUL5 291 aaKnown RBP13.08□□□□□ -0.32
RFC1-203ENST00000418436 GPRC5DQ9NZD1 345 aa13.08□□□□□ -0.32
RFC1-203ENST00000418436 USP17L3A6NCW0 530 aa13.07□□□□□ -0.32
RFC1-203ENST00000418436 USP17L4A6NCW7 530 aa13.07□□□□□ -0.32
RFC1-203ENST00000418436 IL1R1P14778 569 aa13.07□□□□□ -0.32
RFC1-203ENST00000418436 RPS12P25398 132 aaKnown RBP13.07□□□□□ -0.32
RFC1-203ENST00000418436 EPS15P42566 896 aa13.07□□□□□ -0.32
RFC1-203ENST00000418436 USP17L1Q7RTZ2 530 aa13.07□□□□□ -0.32
RFC1-203ENST00000418436 SIL1Q9H173 461 aa13.07□□□□□ -0.32
RFC1-203ENST00000418436 ZBTB40Q9NUA8 1239 aa13.07□□□□□ -0.32
RFC1-203ENST00000418436 LMOD1P29536 600 aaPredicted RBP13.06□□□□□ -0.32
RFC1-203ENST00000418436 PUM3Q15397 648 aaKnown RBP13.06□□□□□ -0.32
RFC1-203ENST00000418436 STRIP1Q5VSL9 837 aa13.06□□□□□ -0.32
RFC1-203ENST00000418436 RSBN1LQ6PCB5 846 aaPredicted RBP13.06□□□□□ -0.32
RFC1-203ENST00000418436 ZNF804AQ7Z570 1209 aa13.06□□□□□ -0.32
RFC1-203ENST00000418436 FBXO33Q7Z6M2 555 aa13.06□□□□□ -0.32
RFC1-203ENST00000418436 PNMA8AQ86V59 439 aaPredicted RBP13.06□□□□□ -0.32
RFC1-203ENST00000418436 AGBL3Q8NEM8 1001 aa13.06□□□□□ -0.32
RFC1-203ENST00000418436 MARVELD3Q96A59 401 aa13.06□□□□□ -0.32
RFC1-203ENST00000418436 FAM84BQ96KN1 310 aaPredicted RBP13.06□□□□□ -0.32
RFC1-203ENST00000418436 GMLQ99445 158 aa13.06□□□□□ -0.32
RFC1-203ENST00000418436 CHMP4BQ9H444 224 aaKnown RBP13.06□□□□□ -0.32
RFC1-203ENST00000418436 ARAP2Q8WZ64 1704 aa13.05□□□□□ -0.32
RFC1-203ENST00000418436 RRP1P56182 461 aaKnown RBP13.05□□□□□ -0.32
RFC1-203ENST00000418436 FSTL1Q12841 308 aa13.05□□□□□ -0.32
RFC1-203ENST00000418436 DACT2Q5SW24 774 aa13.05□□□□□ -0.32
RFC1-203ENST00000418436 CEP85Q6P2H3 762 aa13.05□□□□□ -0.32
RFC1-203ENST00000418436 USP50Q70EL3 339 aaPredicted RBP13.05□□□□□ -0.32
RFC1-203ENST00000418436 SMC1BQ8NDV3 1235 aa13.05□□□□□ -0.32
RFC1-203ENST00000418436 TDRD7Q8NHU6 1098 aaKnown RBP13.05□□□□□ -0.32
RFC1-203ENST00000418436 LPIN2Q92539 896 aa13.05□□□□□ -0.32
RFC1-203ENST00000418436 RTN4Q9NQC3 1192 aaKnown RBP13.05□□□□□ -0.32
RFC1-203ENST00000418436 ADARB2Q9NS39 739 aaKnown RBP13.05□□□□□ -0.32
RFC1-203ENST00000418436 CEP126Q9P2H0 1117 aa13.05□□□□□ -0.32
RFC1-203ENST00000418436 CNOT7Q9UIV1 285 aaKnown RBP13.05□□□□□ -0.32
RFC1-203ENST00000418436 IFIT1P09914 478 aaKnown RBP13.04□□□□□ -0.32
RFC1-203ENST00000418436 HIBADHP31937 336 aaKnown RBP13.04□□□□□ -0.32
RFC1-203ENST00000418436 GYG1P46976 350 aa13.04□□□□□ -0.32
RFC1-203ENST00000418436 TTLL5Q6EMB2 1281 aa13.04□□□□□ -0.32
RFC1-203ENST00000418436 LDHDQ86WU2 507 aa13.04□□□□□ -0.32
RFC1-203ENST00000418436 ZNF710Q8N1W2 664 aa13.04□□□□□ -0.32
RFC1-203ENST00000418436 NOP58Q9Y2X3 529 aaKnown RBP13.04□□□□□ -0.32
RFC1-203ENST00000418436 SHTN1A0MZ66 631 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms