RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 FPGT-TNNI3KV9GXZ4 949 aa8.43□□□□□ -1.06
CPS1-202ENST00000417946 AOX1Q06278 1338 aa8.43□□□□□ -1.06
CPS1-202ENST00000417946 SNED1Q8TER0 1413 aa8.43□□□□□ -1.06
CPS1-202ENST00000417946 SLX4Q8IY92 1834 aa8.43□□□□□ -1.06
CPS1-202ENST00000417946 WTIPA6NIX2 430 aaPredicted RBP8.42□□□□□ -1.06
CPS1-202ENST00000417946 GOLGA8CPA6NN73 597 aa8.42□□□□□ -1.06
CPS1-202ENST00000417946 HSP90B1P14625 803 aaKnown RBP8.42□□□□□ -1.06
CPS1-202ENST00000417946 FGFR2P21802 821 aa8.42□□□□□ -1.06
CPS1-202ENST00000417946 DMRTA1Q5VZB9 504 aa8.42□□□□□ -1.06
CPS1-202ENST00000417946 PAXIP1Q6ZW49 1069 aaPredicted RBP8.42□□□□□ -1.06
CPS1-202ENST00000417946 AACSQ86V21 672 aa8.42□□□□□ -1.06
CPS1-202ENST00000417946 DBNDD2Q9BQY9 259 aa8.42□□□□□ -1.06
CPS1-202ENST00000417946 IRS2Q9Y4H2 1338 aa8.42□□□□□ -1.06
CPS1-202ENST00000417946 MYO5AQ9Y4I1 1855 aaKnown RBP8.42□□□□□ -1.06
CPS1-202ENST00000417946 ZNF646O15015 1829 aaPredicted RBP8.41□□□□□ -1.06
CPS1-202ENST00000417946 DOCK2Q92608 1830 aa8.41□□□□□ -1.06
CPS1-202ENST00000417946 HRO43593 1189 aa8.41□□□□□ -1.06
CPS1-202ENST00000417946 ADORA1P30542 326 aa8.41□□□□□ -1.06
CPS1-202ENST00000417946 ST5P78524 1137 aa8.41□□□□□ -1.06
CPS1-202ENST00000417946 OS9Q13438 667 aaPredicted RBP8.41□□□□□ -1.06
CPS1-202ENST00000417946 R3HDM1Q15032 1099 aaKnown RBP8.41□□□□□ -1.06
CPS1-202ENST00000417946 BMP2KLQ5H9B9 411 aa8.41□□□□□ -1.06
CPS1-202ENST00000417946 NLRP3Q96P20 1036 aa8.41□□□□□ -1.06
CPS1-202ENST00000417946 BRIP1Q9BX63 1249 aa8.41□□□□□ -1.06
CPS1-202ENST00000417946 CCDC8Q9H0W5 538 aaPredicted RBP8.41□□□□□ -1.06
CPS1-202ENST00000417946 COL1A1P02452 1464 aaPredicted RBP8.4□□□□□ -1.06
CPS1-202ENST00000417946 A0A1B0GUL7 405 aa8.4□□□□□ -1.06
CPS1-202ENST00000417946 SNAP23O00161 211 aa8.4□□□□□ -1.06
CPS1-202ENST00000417946 SRGNP10124 158 aa8.4□□□□□ -1.06
CPS1-202ENST00000417946 GTF2E1P29083 439 aaPredicted RBP8.4□□□□□ -1.06
CPS1-202ENST00000417946 CHRNDQ07001 517 aa8.4□□□□□ -1.06
CPS1-202ENST00000417946 GRAPQ13588 217 aa8.4□□□□□ -1.06
CPS1-202ENST00000417946 LDHAL6AQ6ZMR3 332 aa8.4□□□□□ -1.06
CPS1-202ENST00000417946 CLASRPQ8N2M8 674 aaKnown RBP8.4□□□□□ -1.06
CPS1-202ENST00000417946 HELBQ8NG08 1087 aaPredicted RBP8.4□□□□□ -1.06
CPS1-202ENST00000417946 GRAPLQ8TC17 118 aaPredicted RBP8.4□□□□□ -1.06
CPS1-202ENST00000417946 KCTD12Q96CX2 325 aaKnown RBP8.4□□□□□ -1.06
CPS1-202ENST00000417946 BSDC1Q9NW68 430 aaPredicted RBP8.4□□□□□ -1.06
CPS1-202ENST00000417946 PARP3Q9Y6F1 533 aa8.4□□□□□ -1.06
CPS1-202ENST00000417946 MYH7P12883 1935 aa8.4□□□□□ -1.06
CPS1-202ENST00000417946 MYH13Q9UKX3 1938 aa8.39□□□□□ -1.07
CPS1-202ENST00000417946 TTC41PQ6P2S7 1318 aa8.39□□□□□ -1.07
CPS1-202ENST00000417946 MROH5Q6ZUA9 1318 aa8.39□□□□□ -1.07
CPS1-202ENST00000417946 GTPBP6O43824 516 aaPredicted RBP8.39□□□□□ -1.07
CPS1-202ENST00000417946 EVI5O60447 810 aa8.39□□□□□ -1.07
CPS1-202ENST00000417946 PDE8BO95263 885 aa8.39□□□□□ -1.07
CPS1-202ENST00000417946 ZBTB7AO95365 584 aa8.39□□□□□ -1.07
CPS1-202ENST00000417946 KLRK1P26718 216 aa8.39□□□□□ -1.07
CPS1-202ENST00000417946 TIMM10P62072 90 aa8.39□□□□□ -1.07
CPS1-202ENST00000417946 RPS8P62241 208 aaKnown RBP8.39□□□□□ -1.07
CPS1-202ENST00000417946 ATP2B3Q16720 1220 aa8.39□□□□□ -1.07
CPS1-202ENST00000417946 TMEM132AQ24JP5 1023 aa8.39□□□□□ -1.07
CPS1-202ENST00000417946 TAF7LQ5H9L4 462 aa8.39□□□□□ -1.07
CPS1-202ENST00000417946 METTL24Q5JXM2 366 aa8.39□□□□□ -1.07
CPS1-202ENST00000417946 ANKRD18AQ8IVF6 992 aa8.39□□□□□ -1.07
CPS1-202ENST00000417946 CRAMP1Q96RY5 1269 aa8.39□□□□□ -1.07
CPS1-202ENST00000417946 CDC5LQ99459 802 aaKnown RBP8.39□□□□□ -1.07
CPS1-202ENST00000417946 SLC4A5Q9BY07 1137 aa8.39□□□□□ -1.07
CPS1-202ENST00000417946 BACH2Q9BYV9 841 aa8.39□□□□□ -1.07
CPS1-202ENST00000417946 ECHDC1Q9NTX5 307 aa8.39□□□□□ -1.07
CPS1-202ENST00000417946 CEP126Q9P2H0 1117 aa8.39□□□□□ -1.07
CPS1-202ENST00000417946 MINPP1Q9UNW1 487 aa8.39□□□□□ -1.07
CPS1-202ENST00000417946 CHD4Q14839 1912 aa8.39□□□□□ -1.07
CPS1-202ENST00000417946 TAF5LO75529 589 aa8.38□□□□□ -1.07
CPS1-202ENST00000417946 SDSP20132 328 aa8.38□□□□□ -1.07
CPS1-202ENST00000417946 IGHMBP2P38935 993 aaKnown RBP8.38□□□□□ -1.07
CPS1-202ENST00000417946 SCARF1Q14162 830 aa8.38□□□□□ -1.07
CPS1-202ENST00000417946 PUM3Q15397 648 aaKnown RBP8.38□□□□□ -1.07
CPS1-202ENST00000417946 DDX46Q7L014 1031 aaKnown RBP8.38□□□□□ -1.07
CPS1-202ENST00000417946 ZDHHC16Q969W1 377 aa8.38□□□□□ -1.07
CPS1-202ENST00000417946 XAGE2Q96GT9 111 aa8.38□□□□□ -1.07
CPS1-202ENST00000417946 MTFR1LQ9H019 292 aa8.38□□□□□ -1.07
CPS1-202ENST00000417946 NBPF3Q9H094 633 aa8.38□□□□□ -1.07
CPS1-202ENST00000417946 BCL11AQ9H165 835 aa8.38□□□□□ -1.07
CPS1-202ENST00000417946 TSHZ2Q9NRE2 1034 aa8.38□□□□□ -1.07
CPS1-202ENST00000417946 CNNM1Q9NRU3 951 aa8.38□□□□□ -1.07
CPS1-202ENST00000417946 VPS9D1Q9Y2B5 631 aa8.38□□□□□ -1.07
CPS1-202ENST00000417946 ZNF804BA4D1E1 1349 aa8.37□□□□□ -1.07
CPS1-202ENST00000417946 IFIT2P09913 472 aaKnown RBP8.37□□□□□ -1.07
CPS1-202ENST00000417946 ATP5JP18859 108 aa8.37□□□□□ -1.07
CPS1-202ENST00000417946 KCNA3P22001 575 aa8.37□□□□□ -1.07
CPS1-202ENST00000417946 CHRNA5P30532 468 aa8.37□□□□□ -1.07
CPS1-202ENST00000417946 FOSBP53539 338 aa8.37□□□□□ -1.07
CPS1-202ENST00000417946 OLFM4Q6UX06 510 aa8.37□□□□□ -1.07
CPS1-202ENST00000417946 RBM17Q96I25 401 aaKnown RBP8.37□□□□□ -1.07
CPS1-202ENST00000417946 MPHOSPH8Q99549 860 aa8.37□□□□□ -1.07
CPS1-202ENST00000417946 IL25Q9H293 177 aa8.37□□□□□ -1.07
CPS1-202ENST00000417946 NDUFB9Q9Y6M9 179 aa8.37□□□□□ -1.07
CPS1-202ENST00000417946 GLRX3O76003 335 aaKnown RBP8.36□□□□□ -1.07
CPS1-202ENST00000417946 NPR1P16066 1061 aa8.36□□□□□ -1.07
CPS1-202ENST00000417946 ARID4AP29374 1257 aaPredicted RBP8.36□□□□□ -1.07
CPS1-202ENST00000417946 PDE6BP35913 854 aa8.36□□□□□ -1.07
CPS1-202ENST00000417946 PHKA1P46020 1223 aa8.36□□□□□ -1.07
CPS1-202ENST00000417946 GPSM2P81274 684 aa8.36□□□□□ -1.07
CPS1-202ENST00000417946 STYK1Q6J9G0 422 aa8.36□□□□□ -1.07
CPS1-202ENST00000417946 PI16Q6UXB8 463 aa8.36□□□□□ -1.07
CPS1-202ENST00000417946 TBC1D9Q6ZT07 1266 aa8.36□□□□□ -1.07
CPS1-202ENST00000417946 TXNRD3Q86VQ6 643 aa8.36□□□□□ -1.07
CPS1-202ENST00000417946 C2CD5Q86YS7 1000 aa8.36□□□□□ -1.07
CPS1-202ENST00000417946 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms