RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 BSNDQ8WZ55 320 aa7.98□□□□□ -1.13
PTPRK-209ENST00000415046 GSC2O15499 205 aa7.97□□□□□ -1.13
PTPRK-209ENST00000415046 NLRP12P59046 1061 aa7.97□□□□□ -1.13
PTPRK-209ENST00000415046 PEAR1Q5VY43 1037 aaPredicted RBP7.97□□□□□ -1.13
PTPRK-209ENST00000415046 VN1R5Q7Z5H4 357 aa7.97□□□□□ -1.13
PTPRK-209ENST00000415046 NBPF11Q86T75 865 aa7.97□□□□□ -1.13
PTPRK-209ENST00000415046 UTP4Q969X6 686 aaKnown RBP7.97□□□□□ -1.13
PTPRK-209ENST00000415046 STOML1Q9UBI4 398 aa7.97□□□□□ -1.13
PTPRK-209ENST00000415046 AMOTL2Q9Y2J4 779 aa7.97□□□□□ -1.13
PTPRK-209ENST00000415046 ICMTO60725 284 aa7.96□□□□□ -1.14
PTPRK-209ENST00000415046 C19orf57Q0VDD7 668 aa7.96□□□□□ -1.14
PTPRK-209ENST00000415046 ANKRD34AQ69YU3 496 aa7.96□□□□□ -1.14
PTPRK-209ENST00000415046 SLC7A3Q8WY07 619 aa7.96□□□□□ -1.14
PTPRK-209ENST00000415046 MYRFLQ96LU7 910 aa7.96□□□□□ -1.14
PTPRK-209ENST00000415046 RNF208Q9H0X6 261 aa7.96□□□□□ -1.14
PTPRK-209ENST00000415046 MROH2BQ7Z745 1585 aa7.96□□□□□ -1.14
PTPRK-209ENST00000415046 IGLV1-40P01703 118 aa7.95□□□□□ -1.14
PTPRK-209ENST00000415046 ARL4DP49703 201 aa7.95□□□□□ -1.14
PTPRK-209ENST00000415046 IKBKEQ14164 716 aa7.95□□□□□ -1.14
PTPRK-209ENST00000415046 HGSNATQ68CP4 663 aa7.95□□□□□ -1.14
PTPRK-209ENST00000415046 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.95□□□□□ -1.14
PTPRK-209ENST00000415046 PSMG3-AS1Q96PY0 264 aa7.95□□□□□ -1.14
PTPRK-209ENST00000415046 ZFYVE28Q9HCC9 887 aa7.95□□□□□ -1.14
PTPRK-209ENST00000415046 LATS2Q9NRM7 1088 aa7.95□□□□□ -1.14
PTPRK-209ENST00000415046 WIZO95785 1651 aa7.95□□□□□ -1.14
PTPRK-209ENST00000415046 H3BRB1 525 aa7.94□□□□□ -1.14
PTPRK-209ENST00000415046 SOX1O00570 391 aaPredicted RBP7.94□□□□□ -1.14
PTPRK-209ENST00000415046 RUSC1Q9BVN2 902 aa7.94□□□□□ -1.14
PTPRK-209ENST00000415046 TUT1Q9H6E5 874 aaKnown RBP7.94□□□□□ -1.14
PTPRK-209ENST00000415046 SOX17Q9H6I2 414 aaPredicted RBP7.94□□□□□ -1.14
PTPRK-209ENST00000415046 C7orf69Q9H7B7 122 aa7.94□□□□□ -1.14
PTPRK-209ENST00000415046 SMARCA2P51531 1590 aa7.93□□□□□ -1.14
PTPRK-209ENST00000415046 MEGF11A6BM72 1044 aa7.93□□□□□ -1.14
PTPRK-209ENST00000415046 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.93□□□□□ -1.14
PTPRK-209ENST00000415046 PREPP48147 710 aa7.93□□□□□ -1.14
PTPRK-209ENST00000415046 SERPINB4P48594 390 aa7.93□□□□□ -1.14
PTPRK-209ENST00000415046 CD97P48960 835 aa7.93□□□□□ -1.14
PTPRK-209ENST00000415046 ECM1Q16610 540 aa7.93□□□□□ -1.14
PTPRK-209ENST00000415046 FAM20CQ8IXL6 584 aa7.93□□□□□ -1.14
PTPRK-209ENST00000415046 ESRRAP11474 423 aaPredicted RBP7.92□□□□□ -1.14
PTPRK-209ENST00000415046 NFIAQ12857 509 aa7.92□□□□□ -1.14
PTPRK-209ENST00000415046 GLYCTKQ8IVS8 523 aa7.92□□□□□ -1.14
PTPRK-209ENST00000415046 ASAP3Q8TDY4 903 aa7.92□□□□□ -1.14
PTPRK-209ENST00000415046 KRTAP9-2Q9BYQ4 174 aa7.92□□□□□ -1.14
PTPRK-209ENST00000415046 HIF3AQ9Y2N7 669 aa7.92□□□□□ -1.14
PTPRK-209ENST00000415046 SART1O43290 800 aaKnown RBP7.91□□□□□ -1.14
PTPRK-209ENST00000415046 ARHGAP4P98171 946 aa7.91□□□□□ -1.14
PTPRK-209ENST00000415046 RNF43Q68DV7 783 aa7.91□□□□□ -1.14
PTPRK-209ENST00000415046 FDX2Q6P4F2 183 aa7.91□□□□□ -1.14
PTPRK-209ENST00000415046 ZDHHC13Q8IUH4 622 aa7.91□□□□□ -1.14
PTPRK-209ENST00000415046 TRIM42Q8IWZ5 723 aa7.91□□□□□ -1.14
PTPRK-209ENST00000415046 GALNT12Q8IXK2 581 aa7.91□□□□□ -1.14
PTPRK-209ENST00000415046 BRPF3Q9ULD4 1205 aa7.91□□□□□ -1.14
PTPRK-209ENST00000415046 ATAD2BQ9ULI0 1458 aa7.9□□□□□ -1.14
PTPRK-209ENST00000415046 LOC100289279A0A1B0GTE1 492 aa7.9□□□□□ -1.14
PTPRK-209ENST00000415046 HMX2A2RU54 273 aa7.9□□□□□ -1.14
PTPRK-209ENST00000415046 METTL12A8MUP2 240 aa7.9□□□□□ -1.14
PTPRK-209ENST00000415046 POLR3DP05423 398 aaPredicted RBP7.9□□□□□ -1.14
PTPRK-209ENST00000415046 CLEC10AQ8IUN9 316 aa7.9□□□□□ -1.14
PTPRK-209ENST00000415046 DBNDD2Q9BQY9 259 aa7.9□□□□□ -1.14
PTPRK-209ENST00000415046 TMPRSS13Q9BYE2 586 aa7.9□□□□□ -1.14
PTPRK-209ENST00000415046 PCMTD2Q9NV79 361 aa7.9□□□□□ -1.14
PTPRK-209ENST00000415046 PEG3Q9GZU2 1588 aa7.89□□□□□ -1.15
PTPRK-209ENST00000415046 A0A1W2PP55 124 aa7.89□□□□□ -1.15
PTPRK-209ENST00000415046 TGFB1P01137 390 aa7.89□□□□□ -1.15
PTPRK-209ENST00000415046 BMP3P12645 472 aa7.89□□□□□ -1.15
PTPRK-209ENST00000415046 SSTR4P31391 388 aa7.89□□□□□ -1.15
PTPRK-209ENST00000415046 CCNJLQ8IV13 435 aa7.89□□□□□ -1.15
PTPRK-209ENST00000415046 FAM83CQ9BQN1 747 aa7.89□□□□□ -1.15
PTPRK-209ENST00000415046 USP26Q9BXU7 913 aa7.89□□□□□ -1.15
PTPRK-209ENST00000415046 SUGCTQ9HAC7 445 aa7.89□□□□□ -1.15
PTPRK-209ENST00000415046 HMGXB3Q12766 1538 aa7.88□□□□□ -1.15
PTPRK-209ENST00000415046 BAZ1BQ9UIG0 1483 aaKnown RBP7.88□□□□□ -1.15
PTPRK-209ENST00000415046 KRTAP9-6A0A140TA67 174 aa7.88□□□□□ -1.15
PTPRK-209ENST00000415046 KIAA1324LA8MWY0 1029 aaPredicted RBP7.88□□□□□ -1.15
PTPRK-209ENST00000415046 NDUFB5O43674 189 aa7.88□□□□□ -1.15
PTPRK-209ENST00000415046 EIF4EBP3O60516 100 aaPredicted RBP7.88□□□□□ -1.15
PTPRK-209ENST00000415046 TIAF1O95411 115 aa7.88□□□□□ -1.15
PTPRK-209ENST00000415046 BEND4Q6ZU67 534 aa7.88□□□□□ -1.15
PTPRK-209ENST00000415046 TXNDC2Q86VQ3 553 aa7.88□□□□□ -1.15
PTPRK-209ENST00000415046 SMG8Q8ND04 991 aaKnown RBP7.88□□□□□ -1.15
PTPRK-209ENST00000415046 FAM129BQ96TA1 746 aa7.88□□□□□ -1.15
PTPRK-209ENST00000415046 TCF12Q99081 682 aa7.88□□□□□ -1.15
PTPRK-209ENST00000415046 NRSN2Q9GZP1 204 aa7.88□□□□□ -1.15
PTPRK-209ENST00000415046 A0A096LPE4 126 aa7.87□□□□□ -1.15
PTPRK-209ENST00000415046 A0A1W2PPZ6 126 aa7.87□□□□□ -1.15
PTPRK-209ENST00000415046 GAS2O43903 313 aaKnown RBP7.87□□□□□ -1.15
PTPRK-209ENST00000415046 DLGAP3O95886 979 aa7.87□□□□□ -1.15
PTPRK-209ENST00000415046 NEFLP07196 543 aa7.87□□□□□ -1.15
PTPRK-209ENST00000415046 NUTM2GQ5VZR2 741 aa7.87□□□□□ -1.15
PTPRK-209ENST00000415046 RETREG2Q8NC44 543 aa7.87□□□□□ -1.15
PTPRK-209ENST00000415046 CLEC4MQ9H2X3 399 aaPredicted RBP7.87□□□□□ -1.15
PTPRK-209ENST00000415046 KCNF1Q9H3M0 494 aa7.87□□□□□ -1.15
PTPRK-209ENST00000415046 LIN7BQ9HAP6 207 aa7.87□□□□□ -1.15
PTPRK-209ENST00000415046 COBLO75128 1261 aa7.86□□□□□ -1.15
PTPRK-209ENST00000415046 GRIA4P48058 902 aa7.86□□□□□ -1.15
PTPRK-209ENST00000415046 GSTM4Q03013 218 aa7.86□□□□□ -1.15
PTPRK-209ENST00000415046 PCDH1Q08174 1060 aa7.86□□□□□ -1.15
PTPRK-209ENST00000415046 PDE3BQ13370 1112 aa7.86□□□□□ -1.15
PTPRK-209ENST00000415046 USPL1Q5W0Q7 1092 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms