RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 RASGRF1Q13972 1273 aa18.2■□□□□ 0.5
LRCH3-202ENST00000414675 TTF1Q15361 905 aaPredicted RBP18.2■□□□□ 0.5
LRCH3-202ENST00000414675 BCL2L12Q9HB09 334 aa18.2■□□□□ 0.5
LRCH3-202ENST00000414675 ATP6V1DQ9Y5K8 247 aa18.2■□□□□ 0.5
LRCH3-202ENST00000414675 ATRNO75882 1429 aa18.2■□□□□ 0.5
LRCH3-202ENST00000414675 SCN7AQ01118 1682 aa18.2■□□□□ 0.5
LRCH3-202ENST00000414675 PFKFB2O60825 505 aa18.2■□□□□ 0.5
LRCH3-202ENST00000414675 GPHNQ9NQX3 736 aaPredicted RBP18.2■□□□□ 0.5
LRCH3-202ENST00000414675 DOCK2Q92608 1830 aa18.19■□□□□ 0.5
LRCH3-202ENST00000414675 TCRBV5S4A2TA0A5A2 114 aa18.19■□□□□ 0.5
LRCH3-202ENST00000414675 PDE6AP16499 860 aa18.19■□□□□ 0.5
LRCH3-202ENST00000414675 IGHMBP2P38935 993 aaKnown RBP18.19■□□□□ 0.5
LRCH3-202ENST00000414675 FAM173BQ6P4H8 233 aa18.19■□□□□ 0.5
LRCH3-202ENST00000414675 RBSNQ9H1K0 784 aa18.19■□□□□ 0.5
LRCH3-202ENST00000414675 CTNNA3Q9UI47 895 aa18.19■□□□□ 0.5
LRCH3-202ENST00000414675 ZNF532Q9HCE3 1301 aa18.19■□□□□ 0.5
LRCH3-202ENST00000414675 PDCP20941 246 aa18.19■□□□□ 0.5
LRCH3-202ENST00000414675 TPRNQ4KMQ1 711 aa18.19■□□□□ 0.5
LRCH3-202ENST00000414675 BICDL1Q6ZP65 573 aa18.19■□□□□ 0.5
LRCH3-202ENST00000414675 SPATA5Q8NB90 893 aa18.19■□□□□ 0.5
LRCH3-202ENST00000414675 NHSQ6T4R5 1651 aa18.18■□□□□ 0.5
LRCH3-202ENST00000414675 CTDNEP1O95476 244 aa18.18■□□□□ 0.5
LRCH3-202ENST00000414675 CHRNDQ07001 517 aa18.18■□□□□ 0.5
LRCH3-202ENST00000414675 UBE3CQ15386 1083 aa18.18■□□□□ 0.5
LRCH3-202ENST00000414675 IMMTQ16891 758 aaKnown RBP18.18■□□□□ 0.5
LRCH3-202ENST00000414675 TBC1D9BQ66K14 1250 aa18.18■□□□□ 0.5
LRCH3-202ENST00000414675 ZSCAN25Q6NSZ9 544 aa18.18■□□□□ 0.5
LRCH3-202ENST00000414675 DDX11Q96FC9 970 aa18.18■□□□□ 0.5
LRCH3-202ENST00000414675 SRP68Q9UHB9 627 aaKnown RBP18.18■□□□□ 0.5
LRCH3-202ENST00000414675 A0A1B0GUL6 1792 aa18.18■□□□□ 0.5
LRCH3-202ENST00000414675 BCAMP50895 628 aa18.18■□□□□ 0.5
LRCH3-202ENST00000414675 LRSAM1Q6UWE0 723 aa18.18■□□□□ 0.5
LRCH3-202ENST00000414675 AMIGO3Q86WK7 504 aa18.18■□□□□ 0.5
LRCH3-202ENST00000414675 NBPF3Q9H094 633 aa18.18■□□□□ 0.5
LRCH3-202ENST00000414675 NASPP49321 788 aaPredicted RBP18.17■□□□□ 0.5
LRCH3-202ENST00000414675 NSUN7Q8NE18 718 aaKnown RBP18.17■□□□□ 0.5
LRCH3-202ENST00000414675 SMARCC2Q8TAQ2 1214 aa18.17■□□□□ 0.5
LRCH3-202ENST00000414675 WTIPA6NIX2 430 aaPredicted RBP18.16■□□□□ 0.5
LRCH3-202ENST00000414675 CCT2P78371 535 aaKnown RBP18.16■□□□□ 0.5
LRCH3-202ENST00000414675 MB21D2Q8IYB1 491 aaPredicted RBP18.16■□□□□ 0.5
LRCH3-202ENST00000414675 NKX2-3Q8TAU0 364 aa18.16■□□□□ 0.5
LRCH3-202ENST00000414675 NCOA5Q9HCD5 579 aaKnown RBP18.16■□□□□ 0.5
LRCH3-202ENST00000414675 UBE2HP62256 183 aa18.16■□□□□ 0.5
LRCH3-202ENST00000414675 MEX3CQ5U5Q3 659 aaKnown RBP18.16■□□□□ 0.5
LRCH3-202ENST00000414675 DENND2AQ9ULE3 1009 aa18.16■□□□□ 0.5
LRCH3-202ENST00000414675 PDIA3P30101 505 aaKnown RBP18.15■□□□□ 0.5
LRCH3-202ENST00000414675 ANTXR2P58335 489 aa18.15■□□□□ 0.5
LRCH3-202ENST00000414675 RPS6KA4O75676 772 aa18.15■□□□□ 0.5
LRCH3-202ENST00000414675 SF3B3Q15393 1217 aaKnown RBP18.15■□□□□ 0.5
LRCH3-202ENST00000414675 ZNF213O14771 459 aa18.14■□□□□ 0.49
LRCH3-202ENST00000414675 GNPATO15228 680 aa18.14■□□□□ 0.49
LRCH3-202ENST00000414675 PDIA4P13667 645 aaKnown RBP18.14■□□□□ 0.49
LRCH3-202ENST00000414675 RC3H1Q5TC82 1133 aaKnown RBP18.14■□□□□ 0.49
LRCH3-202ENST00000414675 MAGEB6Q8N7X4 407 aa18.14■□□□□ 0.49
LRCH3-202ENST00000414675 STRBPQ96SI9 672 aaKnown RBP18.14■□□□□ 0.49
LRCH3-202ENST00000414675 CDC5LQ99459 802 aaKnown RBP18.14■□□□□ 0.49
LRCH3-202ENST00000414675 NARFQ9UHQ1 456 aa18.14■□□□□ 0.49
LRCH3-202ENST00000414675 NAP1L2Q9ULW6 460 aaPredicted RBP18.14■□□□□ 0.49
LRCH3-202ENST00000414675 AFF2P51816 1311 aa18.14■□□□□ 0.49
LRCH3-202ENST00000414675 TAF1LQ8IZX4 1826 aa18.14■□□□□ 0.49
LRCH3-202ENST00000414675 PRC1O43663 620 aa18.14■□□□□ 0.49
LRCH3-202ENST00000414675 PPFIA3O75145 1194 aa18.14■□□□□ 0.49
LRCH3-202ENST00000414675 TTC6Q86TZ1 520 aa18.14■□□□□ 0.49
LRCH3-202ENST00000414675 TBC1D10CQ8IV04 446 aa18.14■□□□□ 0.49
LRCH3-202ENST00000414675 FBXL16Q8N461 479 aa18.14■□□□□ 0.49
LRCH3-202ENST00000414675 LLPHQ9BRT6 129 aaKnown RBP18.14■□□□□ 0.49
LRCH3-202ENST00000414675 CCNL1Q9UK58 526 aaPredicted RBP18.14■□□□□ 0.49
LRCH3-202ENST00000414675 SBF2Q86WG5 1849 aa18.13■□□□□ 0.49
LRCH3-202ENST00000414675 PTPDC1A2A3K4 754 aa18.13■□□□□ 0.49
LRCH3-202ENST00000414675 SYAP1Q96A49 352 aaPredicted RBP18.13■□□□□ 0.49
LRCH3-202ENST00000414675 ZNF274Q96GC6 653 aaPredicted RBP18.13■□□□□ 0.49
LRCH3-202ENST00000414675 RRAGDQ9NQL2 400 aaPredicted RBP18.13■□□□□ 0.49
LRCH3-202ENST00000414675 COL24A1Q17RW2 1714 aa18.13■□□□□ 0.49
LRCH3-202ENST00000414675 EVCP57679 992 aa18.12■□□□□ 0.49
LRCH3-202ENST00000414675 ANKRD18AQ8IVF6 992 aa18.12■□□□□ 0.49
LRCH3-202ENST00000414675 IQSEC3Q9UPP2 1182 aaPredicted RBP18.12■□□□□ 0.49
LRCH3-202ENST00000414675 LY75O60449 1722 aa18.12■□□□□ 0.49
LRCH3-202ENST00000414675 SALL1Q9NSC2 1324 aa18.12■□□□□ 0.49
LRCH3-202ENST00000414675 APPP05067 770 aa18.12■□□□□ 0.49
LRCH3-202ENST00000414675 MCM5P33992 734 aa18.12■□□□□ 0.49
LRCH3-202ENST00000414675 RESTQ13127 1097 aa18.12■□□□□ 0.49
LRCH3-202ENST00000414675 SLC10A5Q5PT55 438 aa18.12■□□□□ 0.49
LRCH3-202ENST00000414675 CCDC24Q8N4L8 307 aa18.12■□□□□ 0.49
LRCH3-202ENST00000414675 NCOA7Q8NI08 942 aa18.12■□□□□ 0.49
LRCH3-202ENST00000414675 CELF1Q92879 486 aaKnown RBP18.12■□□□□ 0.49
LRCH3-202ENST00000414675 FOSBP53539 338 aa18.11■□□□□ 0.49
LRCH3-202ENST00000414675 KRT85P78386 507 aa18.11■□□□□ 0.49
LRCH3-202ENST00000414675 MAP3K12Q12852 859 aa18.11■□□□□ 0.49
LRCH3-202ENST00000414675 AIDAQ96BJ3 306 aa18.11■□□□□ 0.49
LRCH3-202ENST00000414675 GJD4Q96KN9 370 aaPredicted RBP18.11■□□□□ 0.49
LRCH3-202ENST00000414675 EPB41L4AQ9HCS5 686 aaPredicted RBP18.11■□□□□ 0.49
LRCH3-202ENST00000414675 TFIP11Q9UBB9 837 aaKnown RBP18.11■□□□□ 0.49
LRCH3-202ENST00000414675 MBD4O95243 580 aa18.11■□□□□ 0.49
LRCH3-202ENST00000414675 FAM184AQ8NB25 1140 aa18.11■□□□□ 0.49
LRCH3-202ENST00000414675 RGL2O15211 777 aa18.1■□□□□ 0.49
LRCH3-202ENST00000414675 GTF2E1P29083 439 aaPredicted RBP18.1■□□□□ 0.49
LRCH3-202ENST00000414675 GYG1P46976 350 aa18.1■□□□□ 0.49
LRCH3-202ENST00000414675 CSPP1Q1MSJ5 1256 aa18.1■□□□□ 0.49
LRCH3-202ENST00000414675 CCDC183Q5T5S1 534 aa18.1■□□□□ 0.49
LRCH3-202ENST00000414675 RALYLQ86SE5 291 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms