RNA–Protein interactions for RNA: ENST00000413748.6

SCG5-202, Transcript of secretogranin V, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCG5, Length 1,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-202ENST00000413748 MTMR14Q8NCE2 650 aa12.54□□□□□ -0.4
SCG5-202ENST00000413748 CD99L2Q8TCZ2 262 aa12.54□□□□□ -0.4
SCG5-202ENST00000413748 ARMC5Q96C12 935 aa12.54□□□□□ -0.4
SCG5-202ENST00000413748 SLC10A4Q96EP9 437 aa12.54□□□□□ -0.4
SCG5-202ENST00000413748 ZSWIM8A7E2V4 1837 aa12.53□□□□□ -0.4
SCG5-202ENST00000413748 ITGA6P23229 1130 aa12.53□□□□□ -0.4
SCG5-202ENST00000413748 FXR1P51114 621 aaKnown RBP eCLIP12.53□□□□□ -0.4
SCG5-202ENST00000413748 INHBEP58166 350 aa12.53□□□□□ -0.4
SCG5-202ENST00000413748 NBPF12Q5TAG4 269 aaPredicted RBP12.53□□□□□ -0.4
SCG5-202ENST00000413748 CCDC30Q5VVM6 783 aa12.53□□□□□ -0.4
SCG5-202ENST00000413748 INTS3Q68E01 1043 aaKnown RBP12.53□□□□□ -0.4
SCG5-202ENST00000413748 CD209Q9NNX6 404 aa12.53□□□□□ -0.4
SCG5-202ENST00000413748 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.53□□□□□ -0.4
SCG5-202ENST00000413748 CLRN2A0PK11 232 aa12.52□□□□□ -0.41
SCG5-202ENST00000413748 TESPA1A2RU30 521 aaPredicted RBP12.52□□□□□ -0.41
SCG5-202ENST00000413748 SPDYE2BA6NHP3 402 aa12.52□□□□□ -0.41
SCG5-202ENST00000413748 CSF1RP07333 972 aa12.52□□□□□ -0.41
SCG5-202ENST00000413748 SPDYE6P0CI01 402 aa12.52□□□□□ -0.41
SCG5-202ENST00000413748 IGHMBP2P38935 993 aaKnown RBP12.52□□□□□ -0.41
SCG5-202ENST00000413748 CHRNDQ07001 517 aa12.52□□□□□ -0.41
SCG5-202ENST00000413748 DLGAP5Q15398 846 aa12.52□□□□□ -0.41
SCG5-202ENST00000413748 PRMT6Q96LA8 375 aaPredicted RBP12.52□□□□□ -0.41
SCG5-202ENST00000413748 PLA2G12BQ9BX93 195 aa12.52□□□□□ -0.41
SCG5-202ENST00000413748 TAF5LO75529 589 aa12.51□□□□□ -0.41
SCG5-202ENST00000413748 USP2O75604 605 aaPredicted RBP12.51□□□□□ -0.41
SCG5-202ENST00000413748 GCKRQ14397 625 aa12.51□□□□□ -0.41
SCG5-202ENST00000413748 CDAN1Q8IWY9 1227 aa12.51□□□□□ -0.41
SCG5-202ENST00000413748 TSR2Q969E8 191 aaKnown RBP12.51□□□□□ -0.41
SCG5-202ENST00000413748 ANKRD2Q9GZV1 360 aa12.51□□□□□ -0.41
SCG5-202ENST00000413748 PPP2R3BQ9Y5P8 575 aa12.51□□□□□ -0.41
SCG5-202ENST00000413748 UNCXA6NJT0 531 aa12.5□□□□□ -0.41
SCG5-202ENST00000413748 F8W031 263 aaPredicted RBP12.5□□□□□ -0.41
SCG5-202ENST00000413748 DDX10Q13206 875 aaKnown RBP12.5□□□□□ -0.41
SCG5-202ENST00000413748 CFAP100Q494V2 611 aa12.5□□□□□ -0.41
SCG5-202ENST00000413748 C15orf52Q6ZUT6 534 aaKnown RBP12.5□□□□□ -0.41
SCG5-202ENST00000413748 HELBQ8NG08 1087 aaPredicted RBP12.5□□□□□ -0.41
SCG5-202ENST00000413748 ERO1AQ96HE7 468 aa12.5□□□□□ -0.41
SCG5-202ENST00000413748 ZNF333Q96JL9 665 aa12.5□□□□□ -0.41
SCG5-202ENST00000413748 MS4A4AQ96JQ5 239 aa12.5□□□□□ -0.41
SCG5-202ENST00000413748 JAG2Q9Y219 1238 aa12.5□□□□□ -0.41
SCG5-202ENST00000413748 ARAP2Q8WZ64 1704 aa12.5□□□□□ -0.41
SCG5-202ENST00000413748 PPP1R12BO60237 982 aaPredicted RBP12.49□□□□□ -0.41
SCG5-202ENST00000413748 IL1R1P14778 569 aa12.49□□□□□ -0.41
SCG5-202ENST00000413748 NEXNQ0ZGT2 675 aa12.49□□□□□ -0.41
SCG5-202ENST00000413748 RASA3Q14644 834 aa12.49□□□□□ -0.41
SCG5-202ENST00000413748 CNKSR2Q8WXI2 1034 aa12.49□□□□□ -0.41
SCG5-202ENST00000413748 MPHOSPH8Q99549 860 aa12.49□□□□□ -0.41
SCG5-202ENST00000413748 EFCC1Q9HA90 598 aa12.49□□□□□ -0.41
SCG5-202ENST00000413748 LAMA3Q16787 3333 aa12.49□□□□□ -0.41
SCG5-202ENST00000413748 A0A0C4DFX4 3053 aa12.48□□□□□ -0.41
SCG5-202ENST00000413748 SP3Q02447 781 aa12.48□□□□□ -0.41
SCG5-202ENST00000413748 CALD1Q05682 793 aaKnown RBP12.48□□□□□ -0.41
SCG5-202ENST00000413748 OPTNQ96CV9 577 aa12.48□□□□□ -0.41
SCG5-202ENST00000413748 TEPSINQ96N21 525 aa12.48□□□□□ -0.41
SCG5-202ENST00000413748 ELP3Q9H9T3 547 aa12.48□□□□□ -0.41
SCG5-202ENST00000413748 VEZTQ9HBM0 779 aa12.48□□□□□ -0.41
SCG5-202ENST00000413748 COLQQ9Y215 455 aaPredicted RBP12.48□□□□□ -0.41
SCG5-202ENST00000413748 COL6A3P12111 3177 aa12.48□□□□□ -0.41
SCG5-202ENST00000413748 KCNJ4P48050 445 aa12.47□□□□□ -0.41
SCG5-202ENST00000413748 IREB2P48200 963 aaKnown RBP12.47□□□□□ -0.41
SCG5-202ENST00000413748 FKBP1AP62942 108 aaKnown RBP12.47□□□□□ -0.41
SCG5-202ENST00000413748 FOXO4P98177 505 aa12.47□□□□□ -0.41
SCG5-202ENST00000413748 SUPT20HL1Q3ZLR7 823 aa12.47□□□□□ -0.41
SCG5-202ENST00000413748 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.47□□□□□ -0.41
SCG5-202ENST00000413748 ANKRD13AQ8IZ07 590 aa12.47□□□□□ -0.41
SCG5-202ENST00000413748 BRI3BPQ8WY22 251 aa12.47□□□□□ -0.41
SCG5-202ENST00000413748 PTCH2Q9Y6C5 1203 aa12.47□□□□□ -0.41
SCG5-202ENST00000413748 SLC4A2P04920 1241 aa12.46□□□□□ -0.41
SCG5-202ENST00000413748 SPDYE2Q495Y8 402 aa12.46□□□□□ -0.41
SCG5-202ENST00000413748 FAM43AQ8N2R8 423 aa12.46□□□□□ -0.41
SCG5-202ENST00000413748 CACNA1FO60840 1977 aa12.45□□□□□ -0.42
SCG5-202ENST00000413748 ANKRD18BA2A2Z9 1011 aa12.45□□□□□ -0.42
SCG5-202ENST00000413748 MYO1BO43795 1136 aa12.45□□□□□ -0.42
SCG5-202ENST00000413748 FLIIQ13045 1269 aa12.45□□□□□ -0.42
SCG5-202ENST00000413748 VGLL4Q14135 290 aa12.45□□□□□ -0.42
SCG5-202ENST00000413748 TWISTNBQ3B726 338 aaPredicted RBP12.45□□□□□ -0.42
SCG5-202ENST00000413748 EPHA10Q5JZY3 1008 aa12.45□□□□□ -0.42
SCG5-202ENST00000413748 OTUD7BQ6GQQ9 843 aa12.45□□□□□ -0.42
SCG5-202ENST00000413748 LINS1Q8NG48 757 aa12.45□□□□□ -0.42
SCG5-202ENST00000413748 STK31Q9BXU1 1019 aa12.45□□□□□ -0.42
SCG5-202ENST00000413748 ARHGAP39Q9C0H5 1083 aa12.45□□□□□ -0.42
SCG5-202ENST00000413748 PRKRIP1Q9H875 184 aaPredicted RBP12.45□□□□□ -0.42
SCG5-202ENST00000413748 ZNF70Q9UC06 446 aaPredicted RBP12.45□□□□□ -0.42
SCG5-202ENST00000413748 FAM205AQ6ZU69 1335 aa12.44□□□□□ -0.42
SCG5-202ENST00000413748 GRIK5Q16478 980 aa12.44□□□□□ -0.42
SCG5-202ENST00000413748 ZNF804AQ7Z570 1209 aa12.44□□□□□ -0.42
SCG5-202ENST00000413748 DNAAF4Q8WXU2 420 aa12.44□□□□□ -0.42
SCG5-202ENST00000413748 OTUD5Q96G74 571 aa12.44□□□□□ -0.42
SCG5-202ENST00000413748 ZNF594Q96JF6 807 aaPredicted RBP12.44□□□□□ -0.42
SCG5-202ENST00000413748 CHMP4AQ9BY43 222 aa12.44□□□□□ -0.42
SCG5-202ENST00000413748 TMEM39BQ9GZU3 492 aa12.44□□□□□ -0.42
SCG5-202ENST00000413748 TDRD3Q9H7E2 651 aaKnown RBP12.44□□□□□ -0.42
SCG5-202ENST00000413748 CCL15-CCL14A0A0B4J2E2 113 aa12.43□□□□□ -0.42
SCG5-202ENST00000413748 H0YGN5 161 aa12.43□□□□□ -0.42
SCG5-202ENST00000413748 MYCP01106 439 aaPredicted RBP12.43□□□□□ -0.42
SCG5-202ENST00000413748 RBM5P52756 815 aaKnown RBP eCLIP12.43□□□□□ -0.42
SCG5-202ENST00000413748 IFIT5Q13325 482 aaKnown RBP12.43□□□□□ -0.42
SCG5-202ENST00000413748 CCL15Q16663 113 aa12.43□□□□□ -0.42
SCG5-202ENST00000413748 SLC9C1Q4G0N8 1177 aa12.43□□□□□ -0.42
SCG5-202ENST00000413748 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms