RNA–Protein interactions for RNA: ENST00000413440.5

PRDM2-206, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-206ENST00000413440 ONECUT3O60422 494 aaPredicted RBP6.82□□□□□ -1.32
PRDM2-206ENST00000413440 IREB2P48200 963 aaKnown RBP6.82□□□□□ -1.32
PRDM2-206ENST00000413440 HUNKP57058 714 aa6.82□□□□□ -1.32
PRDM2-206ENST00000413440 CCDC96Q2M329 555 aa6.82□□□□□ -1.32
PRDM2-206ENST00000413440 KLHDC4Q8TBB5 520 aa6.82□□□□□ -1.32
PRDM2-206ENST00000413440 FAM200AQ8TCP9 573 aa6.82□□□□□ -1.32
PRDM2-206ENST00000413440 EXOC6BQ9Y2D4 811 aa6.82□□□□□ -1.32
PRDM2-206ENST00000413440 ZBTB12Q9Y330 459 aaPredicted RBP6.82□□□□□ -1.32
PRDM2-206ENST00000413440 NEURL1BA8MQ27 555 aa6.82□□□□□ -1.32
PRDM2-206ENST00000413440 USP17L8P0C7I0 530 aa6.82□□□□□ -1.32
PRDM2-206ENST00000413440 NKX1-1Q15270 411 aaPredicted RBP6.82□□□□□ -1.32
PRDM2-206ENST00000413440 MCTP1Q6DN14 999 aa6.82□□□□□ -1.32
PRDM2-206ENST00000413440 LINS1Q8NG48 757 aa6.82□□□□□ -1.32
PRDM2-206ENST00000413440 PKNOX2Q96KN3 472 aa6.82□□□□□ -1.32
PRDM2-206ENST00000413440 LRRCC1Q9C099 1032 aa6.82□□□□□ -1.32
PRDM2-206ENST00000413440 BOLA2Q9H3K6 86 aa6.82□□□□□ -1.32
PRDM2-206ENST00000413440 TRIM35Q9UPQ4 493 aa6.82□□□□□ -1.32
PRDM2-206ENST00000413440 PIBF1Q8WXW3 757 aa6.82□□□□□ -1.32
PRDM2-206ENST00000413440 USP40Q9NVE5 1235 aa6.82□□□□□ -1.32
PRDM2-206ENST00000413440 GLI3P10071 1580 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 YBX3P16989 372 aaKnown RBP eCLIP6.81□□□□□ -1.32
PRDM2-206ENST00000413440 SCARF1Q14162 830 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 PUM3Q15397 648 aaKnown RBP6.81□□□□□ -1.32
PRDM2-206ENST00000413440 ZNF444Q8N0Y2 327 aaPredicted RBP6.81□□□□□ -1.32
PRDM2-206ENST00000413440 CNTROBQ8N137 903 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 TEKT1Q969V4 418 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.81□□□□□ -1.32
PRDM2-206ENST00000413440 TSKSQ9UJT2 592 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 ZNRF3Q9ULT6 936 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 SLIT3O75094 1523 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 BCL9O00512 1426 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 PSMD14O00487 310 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 TFCP2Q12800 502 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 SUPT20HL1Q3ZLR7 823 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 MIGA1Q8NAN2 632 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 PODXL2Q9NZ53 605 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 DENND2AQ9ULE3 1009 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 CNGA1P29973 690 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 INTS3Q68E01 1043 aaKnown RBP6.81□□□□□ -1.32
PRDM2-206ENST00000413440 RGPD5Q99666 1765 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 CHL1O00533 1208 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 ALDH1L1O75891 902 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 PCCAP05165 728 aaPredicted RBP6.81□□□□□ -1.32
PRDM2-206ENST00000413440 PRAMEF18Q5VWM3 479 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 FAM184AQ8NB25 1140 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 NMRK2Q9NPI5 230 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 SSX2IPQ9Y2D8 614 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 SMARCA5O60264 1052 aaPredicted RBP6.81□□□□□ -1.32
PRDM2-206ENST00000413440 UQCRFS1P1P0C7P4 283 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 CPLX2Q6PUV4 134 aaKnown RBP6.81□□□□□ -1.32
PRDM2-206ENST00000413440 PROM2Q8N271 834 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 PAGR1Q9BTK6 254 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 C22orf23Q9BZE7 217 aa6.81□□□□□ -1.32
PRDM2-206ENST00000413440 GOLIM4O00461 696 aa6.8□□□□□ -1.32
PRDM2-206ENST00000413440 ALDH1L2Q3SY69 923 aa6.8□□□□□ -1.32
PRDM2-206ENST00000413440 MIGA2Q7L4E1 593 aa6.8□□□□□ -1.32
PRDM2-206ENST00000413440 SP8Q8IXZ3 490 aa6.8□□□□□ -1.32
PRDM2-206ENST00000413440 RUFY2Q8WXA3 655 aa6.8□□□□□ -1.32
PRDM2-206ENST00000413440 REC8O95072 547 aa6.8□□□□□ -1.32
PRDM2-206ENST00000413440 APLP1P51693 650 aa6.8□□□□□ -1.32
PRDM2-206ENST00000413440 SAMD7Q7Z3H4 446 aa6.8□□□□□ -1.32
PRDM2-206ENST00000413440 MAGEB6Q8N7X4 407 aa6.8□□□□□ -1.32
PRDM2-206ENST00000413440 SUCLG2Q96I99 432 aa6.8□□□□□ -1.32
PRDM2-206ENST00000413440 CRNKL1Q9BZJ0 848 aaKnown RBP6.8□□□□□ -1.32
PRDM2-206ENST00000413440 ABCC4O15439 1325 aa6.8□□□□□ -1.32
PRDM2-206ENST00000413440 MROH5Q6ZUA9 1318 aa6.8□□□□□ -1.32
PRDM2-206ENST00000413440 CICQ96RK0 1608 aaPredicted RBP6.8□□□□□ -1.32
PRDM2-206ENST00000413440 FMNL1O95466 1100 aaPredicted RBP6.8□□□□□ -1.32
PRDM2-206ENST00000413440 DDR1Q08345 913 aa6.8□□□□□ -1.32
PRDM2-206ENST00000413440 MAPK8IP2Q13387 824 aaPredicted RBP6.8□□□□□ -1.32
PRDM2-206ENST00000413440 TEX11Q8IYF3 940 aa6.8□□□□□ -1.32
PRDM2-206ENST00000413440 MRPL50Q8N5N7 158 aaKnown RBP6.8□□□□□ -1.32
PRDM2-206ENST00000413440 FERMT2Q96AC1 680 aa6.8□□□□□ -1.32
PRDM2-206ENST00000413440 CFAP100Q494V2 611 aa6.8□□□□□ -1.32
PRDM2-206ENST00000413440 GOLGA6L1Q8N7Z2 621 aa6.8□□□□□ -1.32
PRDM2-206ENST00000413440 PDILTQ8N807 584 aa6.8□□□□□ -1.32
PRDM2-206ENST00000413440 CELF1Q92879 486 aaKnown RBP6.8□□□□□ -1.32
PRDM2-206ENST00000413440 TMEM106CQ9BVX2 250 aa6.8□□□□□ -1.32
PRDM2-206ENST00000413440 TANGO6Q9C0B7 1094 aa6.8□□□□□ -1.32
PRDM2-206ENST00000413440 IL16Q14005 1332 aa6.8□□□□□ -1.32
PRDM2-206ENST00000413440 SKIV2LQ15477 1246 aaKnown RBP6.8□□□□□ -1.32
PRDM2-206ENST00000413440 PLEKHF1Q96S99 279 aa6.8□□□□□ -1.32
PRDM2-206ENST00000413440 TSPYL2Q9H2G4 693 aaPredicted RBP6.8□□□□□ -1.32
PRDM2-206ENST00000413440 CIZ1Q9ULV3 898 aaPredicted RBP6.8□□□□□ -1.32
PRDM2-206ENST00000413440 MAGEB6P1A0A0J9YX57 407 aa6.79□□□□□ -1.32
PRDM2-206ENST00000413440 HOXB7P09629 217 aa6.79□□□□□ -1.32
PRDM2-206ENST00000413440 MATR3P43243 847 aaKnown RBP eCLIP6.79□□□□□ -1.323e-6■■■□□ 16.2
PRDM2-206ENST00000413440 IRX3P78415 501 aaPredicted RBP6.79□□□□□ -1.32
PRDM2-206ENST00000413440 PRPF31Q8WWY3 499 aaKnown RBP6.79□□□□□ -1.32
PRDM2-206ENST00000413440 HINFPQ9BQA5 517 aa6.79□□□□□ -1.32
PRDM2-206ENST00000413440 LEMD3Q9Y2U8 911 aa6.79□□□□□ -1.32
PRDM2-206ENST00000413440 ERBB4Q15303 1308 aa6.79□□□□□ -1.32
PRDM2-206ENST00000413440 CDC45O75419 566 aa6.79□□□□□ -1.32
PRDM2-206ENST00000413440 MSNP26038 577 aaKnown RBP6.79□□□□□ -1.32
PRDM2-206ENST00000413440 BCAMP50895 628 aa6.79□□□□□ -1.32
PRDM2-206ENST00000413440 EIF5P55010 431 aaKnown RBP6.79□□□□□ -1.32
PRDM2-206ENST00000413440 HMGN5P82970 282 aaKnown RBP6.79□□□□□ -1.32
PRDM2-206ENST00000413440 ANGEL2Q5VTE6 544 aaKnown RBP6.79□□□□□ -1.32
PRDM2-206ENST00000413440 DCAF15Q66K64 600 aa6.79□□□□□ -1.32
PRDM2-206ENST00000413440 MXD3Q9BW11 206 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms