RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 TUFT1Q9NNX1 390 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 NKIRAS1Q9NYS0 192 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 POTEIP0CG38 1075 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 MX2P20592 715 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 NUTM2DQ5VT03 806 aaPredicted RBP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 NUTM2AQ8IVF1 878 aaPredicted RBP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 CSRNP2Q9H175 543 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 NUP62CLQ9H1M0 184 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 ACTR5Q9H9F9 607 aaPredicted RBP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 GNL3LQ9NVN8 582 aaKnown RBP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 MTRF1LQ9UGC7 380 aaKnown RBP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 SOX13Q9UN79 622 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 TTC4O95801 387 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 CAPRIN2Q6IMN6 1127 aaKnown RBP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 CATSPER3Q86XQ3 398 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 GPR161Q8N6U8 529 aaKnown RBP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 ARHGEF2Q92974 986 aaKnown RBP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 UBE2OQ9C0C9 1292 aaKnown RBP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 BCL11BQ9C0K0 894 aaPredicted RBP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 DNAJC17Q9NVM6 304 aaKnown RBP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 RBM27Q9P2N5 1060 aaKnown RBP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 DBNLQ9UJU6 430 aaKnown RBP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 UBXN8O00124 270 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 STK10O94804 968 aaKnown RBP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 ECEL1O95672 775 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 SFPQP23246 707 aaKnown RBP eCLIP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 PTPN14Q15678 1187 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 CC2D2BQ6DHV5 1058 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 TRIML1Q8N9V2 468 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 LMBR1Q8WVP7 490 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 RFT1Q96AA3 541 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 PYM1Q9BRP8 204 aaKnown RBP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 TUBGCP2Q9BSJ2 902 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 ASCC2Q9H1I8 757 aaPredicted RBP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 RASSF9O75901 435 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 MCF2P10911 925 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 CCT6AP40227 531 aaKnown RBP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 EIF2S3P41091 472 aaKnown RBP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 SESN3P58005 492 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 MRPS35P82673 323 aaKnown RBP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 NBPF1Q3BBV0 1214 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 DDX21Q9NR30 783 aaKnown RBP eCLIP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 UBAP1Q9NZ09 502 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 KANK1Q14678 1352 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 TUBBP07437 444 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 GCKP35557 465 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 LRMPQ12912 555 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 NBPF8Q3BBV2 869 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.14□□□□□ -1.59
PTPN13-202ENST00000411767 MCF2L2Q86YR7 1114 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 NBPF3Q9H094 633 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 MYLK2Q9H1R3 596 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 VPS16Q9H269 839 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 EXOC1Q9NV70 894 aa5.14□□□□□ -1.59
PTPN13-202ENST00000411767 SESN2P58004 480 aaPredicted RBP5.13□□□□□ -1.59
PTPN13-202ENST00000411767 TMED1Q13445 227 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 ACBD5Q5T8D3 534 aaPredicted RBP5.13□□□□□ -1.59
PTPN13-202ENST00000411767 ESRP1Q6NXG1 681 aaKnown RBP5.13□□□□□ -1.59
PTPN13-202ENST00000411767 CNTROBQ8N137 903 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 TRIML2Q8N7C3 387 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 HOOK2Q96ED9 719 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 I3L4J1 428 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 KIF11P52732 1056 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 RBM10P98175 930 aaKnown RBP5.13□□□□□ -1.59
PTPN13-202ENST00000411767 DEUP1Q05D60 604 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 CRBNQ96SW2 442 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 TNMDQ9H2S6 317 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 RPRD1BQ9NQG5 326 aaKnown RBP5.13□□□□□ -1.59
PTPN13-202ENST00000411767 TRPC6Q9Y210 931 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 H7C0S8 307 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 PFDN6O15212 129 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 SNX1Q13596 522 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 KARSQ15046 597 aaKnown RBP5.13□□□□□ -1.59
PTPN13-202ENST00000411767 FOXD4L6Q3SYB3 417 aaPredicted RBP5.13□□□□□ -1.59
PTPN13-202ENST00000411767 GRAMD4Q6IC98 578 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 FOXD4L3Q6VB84 417 aaPredicted RBP5.13□□□□□ -1.59
PTPN13-202ENST00000411767 RASEFQ8IZ41 740 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 FAM177A1Q8N128 213 aaPredicted RBP5.13□□□□□ -1.59
PTPN13-202ENST00000411767 TBC1D2Q9BYX2 928 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 FRMD4BQ9Y2L6 1034 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 RPGRIP1LQ68CZ1 1315 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 ANKRD30AQ9BXX3 1397 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 MAP2K2P36507 400 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 SUZ12Q15022 739 aaKnown RBP5.13□□□□□ -1.59
PTPN13-202ENST00000411767 TAF12Q16514 161 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 NR1H4Q96RI1 486 aaPredicted RBP5.13□□□□□ -1.59
PTPN13-202ENST00000411767 OLFM1Q99784 485 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 KRT87PA6NCN2 255 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 OPHN1O60890 802 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 ATP2C2O75185 946 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 TOP1P11387 765 aaKnown RBP5.13□□□□□ -1.59
PTPN13-202ENST00000411767 SMARCA1P28370 1054 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 CA8P35219 290 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 STX1BP61266 288 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 CNGA4Q8IV77 575 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 LTV1Q96GA3 475 aaPredicted RBP5.13□□□□□ -1.59
PTPN13-202ENST00000411767 VPS37BQ9H9H4 285 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 PKD2L1Q9P0L9 805 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 ARHGAP42A6NI28 874 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 CHMP4BP1P59074 171 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms