RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 RIPOR2Q9Y4F9 1068 aa18.28■□□□□ 0.52
MCF2L-210ENST00000409954 MROH5Q6ZUA9 1318 aa18.27■□□□□ 0.52
MCF2L-210ENST00000409954 TRPA1O75762 1119 aa18.27■□□□□ 0.52
MCF2L-210ENST00000409954 HIBADHP31937 336 aaKnown RBP18.27■□□□□ 0.52
MCF2L-210ENST00000409954 RABL6Q3YEC7 729 aaPredicted RBP18.27■□□□□ 0.52
MCF2L-210ENST00000409954 RASAL3Q86YV0 1011 aa18.27■□□□□ 0.52
MCF2L-210ENST00000409954 CERS5Q8N5B7 392 aa18.27■□□□□ 0.52
MCF2L-210ENST00000409954 TDRD7Q8NHU6 1098 aaKnown RBP18.27■□□□□ 0.52
MCF2L-210ENST00000409954 SSH1Q8WYL5 1049 aa18.27■□□□□ 0.52
MCF2L-210ENST00000409954 SCAF8Q9UPN6 1271 aaKnown RBP18.27■□□□□ 0.52
MCF2L-210ENST00000409954 FAM205AQ6ZU69 1335 aa18.26■□□□□ 0.51
MCF2L-210ENST00000409954 DEFB129Q9H1M3 183 aa18.26■□□□□ 0.51
MCF2L-210ENST00000409954 BICC1Q9H694 974 aaKnown RBP18.26■□□□□ 0.51
MCF2L-210ENST00000409954 PPP2R3BQ9Y5P8 575 aa18.26■□□□□ 0.51
MCF2L-210ENST00000409954 CT47B1P0C2W7 299 aaPredicted RBP18.25■□□□□ 0.51
MCF2L-210ENST00000409954 MOB2Q70IA6 237 aa18.25■□□□□ 0.51
MCF2L-210ENST00000409954 FAM84BQ96KN1 310 aaPredicted RBP18.25■□□□□ 0.51
MCF2L-210ENST00000409954 PUS3Q9BZE2 481 aaKnown RBP18.25■□□□□ 0.51
MCF2L-210ENST00000409954 USP44Q9H0E7 712 aa18.25■□□□□ 0.51
MCF2L-210ENST00000409954 PSME4Q14997 1843 aa18.24■□□□□ 0.51
MCF2L-210ENST00000409954 UNCXA6NJT0 531 aa18.24■□□□□ 0.51
MCF2L-210ENST00000409954 TM4SF4P48230 202 aa18.24■□□□□ 0.51
MCF2L-210ENST00000409954 SUPT20HL1Q3ZLR7 823 aa18.24■□□□□ 0.51
MCF2L-210ENST00000409954 CFAP100Q494V2 611 aa18.24■□□□□ 0.51
MCF2L-210ENST00000409954 TRMT2AQ8IZ69 625 aaKnown RBP18.24■□□□□ 0.51
MCF2L-210ENST00000409954 SPDYE2BA6NHP3 402 aa18.23■□□□□ 0.51
MCF2L-210ENST00000409954 F8W031 263 aaPredicted RBP18.23■□□□□ 0.51
MCF2L-210ENST00000409954 PPP1R12BO60237 982 aaPredicted RBP18.23■□□□□ 0.51
MCF2L-210ENST00000409954 SPDYE6P0CI01 402 aa18.23■□□□□ 0.51
MCF2L-210ENST00000409954 DGKZQ13574 1117 aa18.23■□□□□ 0.51
MCF2L-210ENST00000409954 CAVIN4Q5BKX8 364 aa18.23■□□□□ 0.51
MCF2L-210ENST00000409954 LDLRAD1Q5T700 205 aa18.23■□□□□ 0.51
MCF2L-210ENST00000409954 FBXO33Q7Z6M2 555 aa18.23■□□□□ 0.51
MCF2L-210ENST00000409954 VPS37DQ86XT2 251 aa18.23■□□□□ 0.51
MCF2L-210ENST00000409954 PRMT6Q96LA8 375 aaPredicted RBP18.23■□□□□ 0.51
MCF2L-210ENST00000409954 MCOLN1Q9GZU1 580 aa18.23■□□□□ 0.51
MCF2L-210ENST00000409954 HDAC5Q9UQL6 1122 aa18.23■□□□□ 0.51
MCF2L-210ENST00000409954 CCDC85CA6NKD9 419 aa18.22■□□□□ 0.51
MCF2L-210ENST00000409954 CCER2I3L3R5 266 aa18.22■□□□□ 0.51
MCF2L-210ENST00000409954 PDE8BO95263 885 aa18.22■□□□□ 0.51
MCF2L-210ENST00000409954 GYG1P46976 350 aa18.22■□□□□ 0.51
MCF2L-210ENST00000409954 RBM5P52756 815 aaKnown RBP eCLIP18.22■□□□□ 0.51
MCF2L-210ENST00000409954 PTPN12Q05209 780 aaKnown RBP18.22■□□□□ 0.51
MCF2L-210ENST00000409954 ANKRD44Q8N8A2 993 aa18.22■□□□□ 0.51
MCF2L-210ENST00000409954 SERPINA10Q9UK55 444 aa18.22■□□□□ 0.51
MCF2L-210ENST00000409954 INHBEP58166 350 aa18.21■□□□□ 0.51
MCF2L-210ENST00000409954 MAP3K11Q16584 847 aa18.21■□□□□ 0.51
MCF2L-210ENST00000409954 METTL24Q5JXM2 366 aa18.21■□□□□ 0.51
MCF2L-210ENST00000409954 MFSD14BQ5SR56 506 aa18.21■□□□□ 0.51
MCF2L-210ENST00000409954 SLC10A4Q96EP9 437 aa18.21■□□□□ 0.51
MCF2L-210ENST00000409954 CDCA7LQ96GN5 454 aa18.21■□□□□ 0.51
MCF2L-210ENST00000409954 ANGEL1Q9UNK9 670 aaKnown RBP18.21■□□□□ 0.51
MCF2L-210ENST00000409954 SREBF2Q12772 1141 aa18.2■□□□□ 0.5
MCF2L-210ENST00000409954 PRKG1Q13976 671 aa18.2■□□□□ 0.5
MCF2L-210ENST00000409954 LRRC24Q50LG9 513 aa18.2■□□□□ 0.5
MCF2L-210ENST00000409954 TBC1D22AQ8WUA7 517 aa18.2■□□□□ 0.5
MCF2L-210ENST00000409954 MRIQ9BWK5 157 aa18.2■□□□□ 0.5
MCF2L-210ENST00000409954 SMC4Q9NTJ3 1288 aa18.2■□□□□ 0.5
MCF2L-210ENST00000409954 TTF2Q9UNY4 1162 aaKnown RBP18.2■□□□□ 0.5
MCF2L-210ENST00000409954 FRAT2O75474 233 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-210ENST00000409954 RGS19P49795 217 aa18.19■□□□□ 0.5
MCF2L-210ENST00000409954 HDLBPQ00341 1268 aaKnown RBP18.19■□□□□ 0.5
MCF2L-210ENST00000409954 TNFAIP1Q13829 316 aa18.19■□□□□ 0.5
MCF2L-210ENST00000409954 JAG2Q9Y219 1238 aa18.19■□□□□ 0.5
MCF2L-210ENST00000409954 PAPPA2Q9BXP8 1791 aa18.19■□□□□ 0.5
MCF2L-210ENST00000409954 COL1A1P02452 1464 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-210ENST00000409954 CLRN2A0PK11 232 aa18.18■□□□□ 0.5
MCF2L-210ENST00000409954 IFIT1P09914 478 aaKnown RBP18.18■□□□□ 0.5
MCF2L-210ENST00000409954 VEZTQ9HBM0 779 aa18.18■□□□□ 0.5
MCF2L-210ENST00000409954 FBXO3Q9UK99 471 aa18.18■□□□□ 0.5
MCF2L-210ENST00000409954 SPEF2Q9C093 1822 aa18.18■□□□□ 0.5
MCF2L-210ENST00000409954 RASA3Q14644 834 aa18.17■□□□□ 0.5
MCF2L-210ENST00000409954 NOM1Q5C9Z4 860 aaKnown RBP18.17■□□□□ 0.5
MCF2L-210ENST00000409954 SPRYD7Q5W111 196 aa18.17■□□□□ 0.5
MCF2L-210ENST00000409954 VGLL2Q8N8G2 317 aa18.17■□□□□ 0.5
MCF2L-210ENST00000409954 API5Q9BZZ5 524 aaKnown RBP18.17■□□□□ 0.5
MCF2L-210ENST00000409954 NOB1Q9ULX3 412 aaKnown RBP18.17■□□□□ 0.5
MCF2L-210ENST00000409954 PCDHAC2Q9Y5I4 1007 aa18.17■□□□□ 0.5
MCF2L-210ENST00000409954 EYA2O00167 538 aa18.16■□□□□ 0.5
MCF2L-210ENST00000409954 ALDH1A1P00352 501 aa18.16■□□□□ 0.5
MCF2L-210ENST00000409954 IREB2P48200 963 aaKnown RBP18.16■□□□□ 0.5
MCF2L-210ENST00000409954 PKN2Q16513 984 aaKnown RBP18.16■□□□□ 0.5
MCF2L-210ENST00000409954 DZIP1LQ8IYY4 767 aaKnown RBP18.16■□□□□ 0.5
MCF2L-210ENST00000409954 ZNF70Q9UC06 446 aaPredicted RBP18.16■□□□□ 0.5
MCF2L-210ENST00000409954 SUGT1Q9Y2Z0 365 aa18.16■□□□□ 0.5
MCF2L-210ENST00000409954 KIF16BQ96L93 1317 aa18.16■□□□□ 0.5
MCF2L-210ENST00000409954 MANSC4A6NHS7 340 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-210ENST00000409954 USP2O75604 605 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-210ENST00000409954 TBC1D8O95759 1140 aa18.15■□□□□ 0.5
MCF2L-210ENST00000409954 UBTFL1P0CB47 393 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-210ENST00000409954 ZBTB48P10074 688 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-210ENST00000409954 TNNI2P48788 182 aa18.15■□□□□ 0.5
MCF2L-210ENST00000409954 BCAMP50895 628 aa18.15■□□□□ 0.5
MCF2L-210ENST00000409954 PUM3Q15397 648 aaKnown RBP18.15■□□□□ 0.5
MCF2L-210ENST00000409954 SPDYE2Q495Y8 402 aa18.15■□□□□ 0.5
MCF2L-210ENST00000409954 NBPF12Q5TAG4 269 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-210ENST00000409954 CTU1Q7Z7A3 348 aaKnown RBP18.15■□□□□ 0.5
MCF2L-210ENST00000409954 CFHR5Q9BXR6 569 aa18.15■□□□□ 0.5
MCF2L-210ENST00000409954 TDRD3Q9H7E2 651 aaKnown RBP18.15■□□□□ 0.5
MCF2L-210ENST00000409954 FGFR2P21802 821 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms