RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 ADORA1P30542 326 aa24.5■■□□□ 1.51
PDLIM2-207ENST00000409417 MMP14P50281 582 aa24.5■■□□□ 1.51
PDLIM2-207ENST00000409417 GNL3LQ9NVN8 582 aaKnown RBP24.5■■□□□ 1.51
PDLIM2-207ENST00000409417 IQSEC3Q9UPP2 1182 aaPredicted RBP24.5■■□□□ 1.51
PDLIM2-207ENST00000409417 EXOC6BQ9Y2D4 811 aa24.5■■□□□ 1.51
PDLIM2-207ENST00000409417 SAMD7Q7Z3H4 446 aa24.49■■□□□ 1.51
PDLIM2-207ENST00000409417 ERC1Q8IUD2 1116 aa24.49■■□□□ 1.51
PDLIM2-207ENST00000409417 OGFOD1Q8N543 542 aa24.49■■□□□ 1.51
PDLIM2-207ENST00000409417 CERS5Q8N5B7 392 aa24.49■■□□□ 1.51
PDLIM2-207ENST00000409417 TRPM4Q8TD43 1214 aa24.49■■□□□ 1.51
PDLIM2-207ENST00000409417 XAGE2Q96GT9 111 aa24.49■■□□□ 1.51
PDLIM2-207ENST00000409417 JAG2Q9Y219 1238 aa24.49■■□□□ 1.51
PDLIM2-207ENST00000409417 CLEC11AQ9Y240 323 aa24.49■■□□□ 1.51
PDLIM2-207ENST00000409417 HIRAP54198 1017 aaPredicted RBP24.48■■□□□ 1.51
PDLIM2-207ENST00000409417 NEUROD6Q96NK8 337 aa24.48■■□□□ 1.51
PDLIM2-207ENST00000409417 TBC1D10BQ4KMP7 808 aaPredicted RBP24.47■■□□□ 1.51
PDLIM2-207ENST00000409417 MFSD14BQ5SR56 506 aa24.47■■□□□ 1.51
PDLIM2-207ENST00000409417 CCDC102BQ68D86 513 aa24.47■■□□□ 1.51
PDLIM2-207ENST00000409417 ZNF646O15015 1829 aaPredicted RBP24.46■■□□□ 1.51
PDLIM2-207ENST00000409417 ZBTB22O15209 634 aa24.46■■□□□ 1.51
PDLIM2-207ENST00000409417 EGFRP00533 1210 aa24.46■■□□□ 1.51
PDLIM2-207ENST00000409417 PHKA1P46020 1223 aa24.46■■□□□ 1.51
PDLIM2-207ENST00000409417 TNNI3KQ59H18 835 aa24.46■■□□□ 1.51
PDLIM2-207ENST00000409417 KIAA0825Q8IV33 1275 aa24.46■■□□□ 1.51
PDLIM2-207ENST00000409417 ZC3H15Q8WU90 426 aaKnown RBP24.46■■□□□ 1.51
PDLIM2-207ENST00000409417 FPGT-TNNI3KV9GXZ4 949 aa24.46■■□□□ 1.51
PDLIM2-207ENST00000409417 CHAF1AQ13111 956 aaPredicted RBP24.45■■□□□ 1.51
PDLIM2-207ENST00000409417 KIF4BQ2VIQ3 1234 aa24.45■■□□□ 1.51
PDLIM2-207ENST00000409417 RBM26Q5T8P6 1007 aaKnown RBP24.45■■□□□ 1.51
PDLIM2-207ENST00000409417 TBC1D22AQ8WUA7 517 aa24.45■■□□□ 1.51
PDLIM2-207ENST00000409417 MYOZ2Q9NPC6 264 aa24.45■■□□□ 1.51
PDLIM2-207ENST00000409417 PGAP2Q9UHJ9 254 aa24.45■■□□□ 1.51
PDLIM2-207ENST00000409417 ADAMTSL1Q8N6G6 1762 aa24.45■■□□□ 1.5
PDLIM2-207ENST00000409417 SEMA3EO15041 775 aa24.45■■□□□ 1.5
PDLIM2-207ENST00000409417 HDAC9Q9UKV0 1011 aa24.45■■□□□ 1.5
PDLIM2-207ENST00000409417 PCDHB15Q9Y5E8 787 aa24.45■■□□□ 1.5
PDLIM2-207ENST00000409417 AAMPQ13685 434 aa24.44■■□□□ 1.5
PDLIM2-207ENST00000409417 GORABQ5T7V8 394 aa24.44■■□□□ 1.5
PDLIM2-207ENST00000409417 MAP1SQ66K74 1059 aaPredicted RBP24.44■■□□□ 1.5
PDLIM2-207ENST00000409417 RAB11FIP3O75154 756 aa24.43■■□□□ 1.5
PDLIM2-207ENST00000409417 CNTROBQ8N137 903 aa24.43■■□□□ 1.5
PDLIM2-207ENST00000409417 RHPN1Q8TCX5 695 aa24.43■■□□□ 1.5
PDLIM2-207ENST00000409417 DENND2AQ9ULE3 1009 aa24.43■■□□□ 1.5
PDLIM2-207ENST00000409417 WDR66Q8TBY9 1149 aa24.42■■□□□ 1.5
PDLIM2-207ENST00000409417 KIF1BPQ96EK5 621 aa24.42■■□□□ 1.5
PDLIM2-207ENST00000409417 ARAP2Q8WZ64 1704 aa24.42■■□□□ 1.5
PDLIM2-207ENST00000409417 ITGBL1O95965 494 aaPredicted RBP24.41■■□□□ 1.5
PDLIM2-207ENST00000409417 EAF2Q96CJ1 260 aaPredicted RBP24.41■■□□□ 1.5
PDLIM2-207ENST00000409417 F8W031 263 aaPredicted RBP24.4■■□□□ 1.5
PDLIM2-207ENST00000409417 RASGRF1Q13972 1273 aa24.4■■□□□ 1.5
PDLIM2-207ENST00000409417 SUGT1Q9Y2Z0 365 aa24.4■■□□□ 1.5
PDLIM2-207ENST00000409417 COL1A1P02452 1464 aaPredicted RBP24.4■■□□□ 1.5
PDLIM2-207ENST00000409417 APBB1O00213 710 aa24.39■■□□□ 1.5
PDLIM2-207ENST00000409417 SCARF1Q14162 830 aa24.39■■□□□ 1.5
PDLIM2-207ENST00000409417 DBNDD2Q9BQY9 259 aa24.39■■□□□ 1.5
PDLIM2-207ENST00000409417 DCTPP1Q9H773 170 aa24.39■■□□□ 1.5
PDLIM2-207ENST00000409417 TTF2Q9UNY4 1162 aaKnown RBP24.39■■□□□ 1.5
PDLIM2-207ENST00000409417 PDS5AQ29RF7 1337 aaKnown RBP24.39■■□□□ 1.49
PDLIM2-207ENST00000409417 HSPA6P17066 643 aa24.38■■□□□ 1.49
PDLIM2-207ENST00000409417 IL1RAPL2Q9NP60 686 aa24.38■■□□□ 1.49
PDLIM2-207ENST00000409417 DBNLQ9UJU6 430 aaKnown RBP24.38■■□□□ 1.49
PDLIM2-207ENST00000409417 WNT10BO00744 389 aa24.38■■□□□ 1.49
PDLIM2-207ENST00000409417 ARID4AP29374 1257 aaPredicted RBP24.38■■□□□ 1.49
PDLIM2-207ENST00000409417 GRIK5Q16478 980 aa24.38■■□□□ 1.49
PDLIM2-207ENST00000409417 CCDC158Q5M9N0 1113 aa24.38■■□□□ 1.49
PDLIM2-207ENST00000409417 AACSQ86V21 672 aa24.38■■□□□ 1.49
PDLIM2-207ENST00000409417 CLASRPQ8N2M8 674 aaKnown RBP24.38■■□□□ 1.49
PDLIM2-207ENST00000409417 MTMR14Q8NCE2 650 aa24.38■■□□□ 1.49
PDLIM2-207ENST00000409417 ZBED3Q96IU2 234 aaPredicted RBP24.38■■□□□ 1.49
PDLIM2-207ENST00000409417 CCDC8Q9H0W5 538 aaPredicted RBP24.38■■□□□ 1.49
PDLIM2-207ENST00000409417 SERPINA10Q9UK55 444 aa24.38■■□□□ 1.49
PDLIM2-207ENST00000409417 PASKQ96RG2 1323 aa24.37■■□□□ 1.49
PDLIM2-207ENST00000409417 SALL1Q9NSC2 1324 aa24.37■■□□□ 1.49
PDLIM2-207ENST00000409417 UQCRFS1P1P0C7P4 283 aa24.37■■□□□ 1.49
PDLIM2-207ENST00000409417 DLGAP5Q15398 846 aa24.37■■□□□ 1.49
PDLIM2-207ENST00000409417 NBPF9Q3BBW0 867 aa24.37■■□□□ 1.49
PDLIM2-207ENST00000409417 EXOC6Q8TAG9 804 aa24.37■■□□□ 1.49
PDLIM2-207ENST00000409417 DCPSQ96C86 337 aaKnown RBP24.37■■□□□ 1.49
PDLIM2-207ENST00000409417 CDC37L1Q7L3B6 337 aa24.36■■□□□ 1.49
PDLIM2-207ENST00000409417 ZNF512BQ96KM6 892 aaPredicted RBP24.36■■□□□ 1.49
PDLIM2-207ENST00000409417 TLR7Q9NYK1 1049 aaKnown RBP24.36■■□□□ 1.49
PDLIM2-207ENST00000409417 GGA3Q9NZ52 723 aa24.36■■□□□ 1.49
PDLIM2-207ENST00000409417 ASTN2O75129 1339 aaPredicted RBP24.35■■□□□ 1.49
PDLIM2-207ENST00000409417 HDLBPQ00341 1268 aaKnown RBP24.35■■□□□ 1.49
PDLIM2-207ENST00000409417 CFAP100Q494V2 611 aa24.35■■□□□ 1.49
PDLIM2-207ENST00000409417 ZGPATQ8N5A5 531 aaKnown RBP24.35■■□□□ 1.49
PDLIM2-207ENST00000409417 SPATA5Q8NB90 893 aa24.35■■□□□ 1.49
PDLIM2-207ENST00000409417 MRIQ9BWK5 157 aa24.35■■□□□ 1.49
PDLIM2-207ENST00000409417 HMG20BQ9P0W2 317 aa24.35■■□□□ 1.49
PDLIM2-207ENST00000409417 APLP1P51693 650 aa24.34■■□□□ 1.49
PDLIM2-207ENST00000409417 TTC39AQ5SRH9 613 aa24.34■■□□□ 1.49
PDLIM2-207ENST00000409417 ANGEL2Q5VTE6 544 aaKnown RBP24.34■■□□□ 1.49
PDLIM2-207ENST00000409417 KRT26Q7Z3Y9 468 aa24.34■■□□□ 1.49
PDLIM2-207ENST00000409417 LRRCC1Q9C099 1032 aa24.34■■□□□ 1.49
PDLIM2-207ENST00000409417 MAST3O60307 1309 aa24.34■■□□□ 1.49
PDLIM2-207ENST00000409417 SPDYE2BA6NHP3 402 aa24.33■■□□□ 1.49
PDLIM2-207ENST00000409417 SPDYE6P0CI01 402 aa24.33■■□□□ 1.49
PDLIM2-207ENST00000409417 MCAMP43121 646 aa24.33■■□□□ 1.49
PDLIM2-207ENST00000409417 RBM5P52756 815 aaKnown RBP eCLIP24.33■■□□□ 1.49
PDLIM2-207ENST00000409417 GLIS2Q9BZE0 524 aaPredicted RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms