RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 GTF3C6Q969F1 213 aa15.61■□□□□ 0.09
COL6A2-204ENST00000409416 IL17RAQ96F46 866 aa15.61■□□□□ 0.09
COL6A2-204ENST00000409416 ZNF219Q9P2Y4 722 aaPredicted RBP15.61■□□□□ 0.09
COL6A2-204ENST00000409416 GPIHBP1Q8IV16 184 aa15.61■□□□□ 0.09
COL6A2-204ENST00000409416 PRIMPOLQ96LW4 560 aa15.61■□□□□ 0.09
COL6A2-204ENST00000409416 NIP7Q9Y221 180 aaKnown RBP eCLIP15.61■□□□□ 0.09
COL6A2-204ENST00000409416 ADGRL3Q9HAR2 1447 aa15.61■□□□□ 0.09
COL6A2-204ENST00000409416 ANKRD18BA2A2Z9 1011 aa15.61■□□□□ 0.09
COL6A2-204ENST00000409416 E7EWF7 191 aa15.61■□□□□ 0.09
COL6A2-204ENST00000409416 HSPD1P10809 573 aaKnown RBP15.61■□□□□ 0.09
COL6A2-204ENST00000409416 KBTBD3Q8NAB2 608 aa15.61■□□□□ 0.09
COL6A2-204ENST00000409416 KIAA1524Q8TCG1 905 aa15.61■□□□□ 0.09
COL6A2-204ENST00000409416 RANBP6O60518 1105 aaKnown RBP15.6■□□□□ 0.09
COL6A2-204ENST00000409416 COBLO75128 1261 aa15.6■□□□□ 0.09
COL6A2-204ENST00000409416 GPAA1O43292 621 aa15.6■□□□□ 0.09
COL6A2-204ENST00000409416 PRKAB2O43741 272 aa15.6■□□□□ 0.09
COL6A2-204ENST00000409416 KLHL10Q6JEL2 608 aa15.6■□□□□ 0.09
COL6A2-204ENST00000409416 USP28Q96RU2 1077 aa15.6■□□□□ 0.09
COL6A2-204ENST00000409416 SLC26A6Q9BXS9 759 aa15.6■□□□□ 0.09
COL6A2-204ENST00000409416 NAPBQ9H115 298 aa15.6■□□□□ 0.09
COL6A2-204ENST00000409416 CLSTN2Q9H4D0 955 aa15.6■□□□□ 0.09
COL6A2-204ENST00000409416 CFAP45Q9UL16 551 aa15.6■□□□□ 0.09
COL6A2-204ENST00000409416 ATP5JP18859 108 aa15.59■□□□□ 0.09
COL6A2-204ENST00000409416 IL15P40933 162 aaPredicted RBP15.59■□□□□ 0.09
COL6A2-204ENST00000409416 ARID5BQ14865 1188 aa15.59■□□□□ 0.09
COL6A2-204ENST00000409416 BCL2L12Q9HB09 334 aa15.59■□□□□ 0.09
COL6A2-204ENST00000409416 IFIT3O14879 490 aaKnown RBP15.59■□□□□ 0.09
COL6A2-204ENST00000409416 C8orf37Q96NL8 207 aa15.59■□□□□ 0.09
COL6A2-204ENST00000409416 RNF113AO15541 343 aaKnown RBP15.59■□□□□ 0.09
COL6A2-204ENST00000409416 BCAMP50895 628 aa15.59■□□□□ 0.09
COL6A2-204ENST00000409416 TRIM29Q14134 588 aa15.59■□□□□ 0.09
COL6A2-204ENST00000409416 FGAP02671 866 aa15.58■□□□□ 0.09
COL6A2-204ENST00000409416 TNNT1P13805 278 aa15.58■□□□□ 0.09
COL6A2-204ENST00000409416 TFCP2L1Q9NZI6 479 aa15.58■□□□□ 0.09
COL6A2-204ENST00000409416 CYP2D7A0A087X1C5 515 aa15.58■□□□□ 0.08
COL6A2-204ENST00000409416 TPM3P06753 285 aa15.58■□□□□ 0.08
COL6A2-204ENST00000409416 MTERF4Q7Z6M4 381 aaKnown RBP15.58■□□□□ 0.08
COL6A2-204ENST00000409416 PDCL2Q8N4E4 241 aa15.58■□□□□ 0.08
COL6A2-204ENST00000409416 SDR42E1Q8WUS8 393 aa15.58■□□□□ 0.08
COL6A2-204ENST00000409416 MAST3O60307 1309 aa15.58■□□□□ 0.08
COL6A2-204ENST00000409416 CACNA1FO60840 1977 aa15.58■□□□□ 0.08
COL6A2-204ENST00000409416 DHX32Q7L7V1 743 aaKnown RBP15.58■□□□□ 0.08
COL6A2-204ENST00000409416 STAMQ92783 540 aa15.58■□□□□ 0.08
COL6A2-204ENST00000409416 DHX16O60231 1041 aaKnown RBP15.57■□□□□ 0.08
COL6A2-204ENST00000409416 ZNF75DP51815 510 aa15.57■□□□□ 0.08
COL6A2-204ENST00000409416 C11orf57Q6ZUT1 292 aaPredicted RBP15.57■□□□□ 0.08
COL6A2-204ENST00000409416 KCNJ14Q9UNX9 436 aa15.57■□□□□ 0.08
COL6A2-204ENST00000409416 KCNQ2O43526 872 aa15.57■□□□□ 0.08
COL6A2-204ENST00000409416 MBD4O95243 580 aa15.57■□□□□ 0.08
COL6A2-204ENST00000409416 LMOD1P29536 600 aaPredicted RBP15.57■□□□□ 0.08
COL6A2-204ENST00000409416 GOLGA8FQ08AF8 430 aa15.56■□□□□ 0.08
COL6A2-204ENST00000409416 GOLGA8DPQ0D2H9 430 aa15.56■□□□□ 0.08
COL6A2-204ENST00000409416 RESTQ13127 1097 aa15.56■□□□□ 0.08
COL6A2-204ENST00000409416 FAM98CQ17RN3 349 aaKnown RBP15.56■□□□□ 0.08
COL6A2-204ENST00000409416 TMEM67Q5HYA8 995 aa15.56■□□□□ 0.08
COL6A2-204ENST00000409416 AOPEPQ8N6M6 819 aa15.56■□□□□ 0.08
COL6A2-204ENST00000409416 KCNB2Q92953 911 aa15.56■□□□□ 0.08
COL6A2-204ENST00000409416 SENP2Q9HC62 589 aa15.56■□□□□ 0.08
COL6A2-204ENST00000409416 ZNF609O15014 1411 aa15.56■□□□□ 0.08
COL6A2-204ENST00000409416 COL15A1P39059 1388 aa15.56■□□□□ 0.08
COL6A2-204ENST00000409416 MED23Q9ULK4 1368 aa15.56■□□□□ 0.08
COL6A2-204ENST00000409416 PCDH11XQ9BZA7 1347 aa15.56■□□□□ 0.08
COL6A2-204ENST00000409416 PCDH11YQ9BZA8 1340 aa15.56■□□□□ 0.08
COL6A2-204ENST00000409416 SMIM22K7EJ46 135 aa15.56■□□□□ 0.08
COL6A2-204ENST00000409416 GYG1P46976 350 aa15.56■□□□□ 0.08
COL6A2-204ENST00000409416 COPRSQ9NQ92 184 aa15.56■□□□□ 0.08
COL6A2-204ENST00000409416 LTN1O94822 1766 aa15.56■□□□□ 0.08
COL6A2-204ENST00000409416 RGPD2P0DJD1 1756 aa15.56■□□□□ 0.08
COL6A2-204ENST00000409416 DHX8Q14562 1220 aaKnown RBP15.56■□□□□ 0.08
COL6A2-204ENST00000409416 ZNF710Q8N1W2 664 aa15.56■□□□□ 0.08
COL6A2-204ENST00000409416 GPR101Q96P66 508 aaPredicted RBP15.56■□□□□ 0.08
COL6A2-204ENST00000409416 LRRC37A3O60309 1634 aa15.55■□□□□ 0.08
COL6A2-204ENST00000409416 AKAP17AQ02040 695 aaKnown RBP15.55■□□□□ 0.08
COL6A2-204ENST00000409416 NAA30Q147X3 362 aaPredicted RBP15.55■□□□□ 0.08
COL6A2-204ENST00000409416 ZNF532Q9HCE3 1301 aa15.55■□□□□ 0.08
COL6A2-204ENST00000409416 CCDC69A6NI79 296 aa15.55■□□□□ 0.08
COL6A2-204ENST00000409416 ZSCAN25Q6NSZ9 544 aa15.55■□□□□ 0.08
COL6A2-204ENST00000409416 NGLY1Q96IV0 654 aa15.55■□□□□ 0.08
COL6A2-204ENST00000409416 HAUS7Q99871 368 aa15.55■□□□□ 0.08
COL6A2-204ENST00000409416 MEGF6O75095 1541 aa15.55■□□□□ 0.08
COL6A2-204ENST00000409416 ELP1O95163 1332 aa15.55■□□□□ 0.08
COL6A2-204ENST00000409416 FAM170AA1A519 330 aa15.55■□□□□ 0.08
COL6A2-204ENST00000409416 U2AF2P26368 475 aaKnown RBP eCLIP15.55■□□□□ 0.08
COL6A2-204ENST00000409416 HOMER1Q86YM7 354 aa15.55■□□□□ 0.08
COL6A2-204ENST00000409416 TCIRG1Q13488 830 aa15.54■□□□□ 0.08
COL6A2-204ENST00000409416 CCDC144BQ3MJ40 725 aa15.54■□□□□ 0.08
COL6A2-204ENST00000409416 CACTINQ8WUQ7 758 aaKnown RBP15.54■□□□□ 0.08
COL6A2-204ENST00000409416 CPLX3Q8WVH0 158 aa15.54■□□□□ 0.08
COL6A2-204ENST00000409416 EEF2KMTQ96G04 330 aa15.54■□□□□ 0.08
COL6A2-204ENST00000409416 CCDC94Q9BW85 323 aaPredicted RBP15.54■□□□□ 0.08
COL6A2-204ENST00000409416 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.54■□□□□ 0.08
COL6A2-204ENST00000409416 GOLGA8AA7E2F4 631 aa15.54■□□□□ 0.08
COL6A2-204ENST00000409416 FOXO4P98177 505 aa15.54■□□□□ 0.08
COL6A2-204ENST00000409416 ATG9AQ7Z3C6 839 aa15.54■□□□□ 0.08
COL6A2-204ENST00000409416 NSUN7Q8NE18 718 aaKnown RBP15.54■□□□□ 0.08
COL6A2-204ENST00000409416 CLIC6Q96NY7 704 aa15.54■□□□□ 0.08
COL6A2-204ENST00000409416 METAP2P50579 478 aaKnown RBP eCLIP15.53■□□□□ 0.08
COL6A2-204ENST00000409416 CPLX2Q6PUV4 134 aaKnown RBP15.53■□□□□ 0.08
COL6A2-204ENST00000409416 ZNF396Q96N95 335 aaPredicted RBP15.53■□□□□ 0.08
COL6A2-204ENST00000409416 PLIN2Q99541 437 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms