RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 MAP1SQ66K74 1059 aaPredicted RBP25.68■■□□□ 1.7
C4orf48-201ENST00000409248 SAMD7Q7Z3H4 446 aa25.68■■□□□ 1.7
C4orf48-201ENST00000409248 FBXO33Q7Z6M2 555 aa25.68■■□□□ 1.7
C4orf48-201ENST00000409248 FAM205AQ6ZU69 1335 aa25.67■■□□□ 1.7
C4orf48-201ENST00000409248 SASH1O94885 1247 aa25.67■■□□□ 1.7
C4orf48-201ENST00000409248 FKBP1AP62942 108 aaKnown RBP25.67■■□□□ 1.7
C4orf48-201ENST00000409248 CNTROBQ8N137 903 aa25.67■■□□□ 1.7
C4orf48-201ENST00000409248 MXD3Q9BW11 206 aa25.67■■□□□ 1.7
C4orf48-201ENST00000409248 AKAP2Q9Y2D5 859 aa25.67■■□□□ 1.7
C4orf48-201ENST00000409248 FRAT2O75474 233 aaPredicted RBP25.66■■□□□ 1.7
C4orf48-201ENST00000409248 HDAC9Q9UKV0 1011 aa25.66■■□□□ 1.7
C4orf48-201ENST00000409248 HIRAP54198 1017 aaPredicted RBP25.65■■□□□ 1.7
C4orf48-201ENST00000409248 OS9Q13438 667 aaPredicted RBP25.65■■□□□ 1.7
C4orf48-201ENST00000409248 MYOZ2Q9NPC6 264 aa25.65■■□□□ 1.7
C4orf48-201ENST00000409248 PASKQ96RG2 1323 aa25.64■■□□□ 1.7
C4orf48-201ENST00000409248 BCAMP50895 628 aa25.64■■□□□ 1.7
C4orf48-201ENST00000409248 RBM26Q5T8P6 1007 aaKnown RBP25.64■■□□□ 1.7
C4orf48-201ENST00000409248 KIAA0825Q8IV33 1275 aa25.64■■□□□ 1.7
C4orf48-201ENST00000409248 PGAP2Q9UHJ9 254 aa25.64■■□□□ 1.7
C4orf48-201ENST00000409248 PCDHB15Q9Y5E8 787 aa25.64■■□□□ 1.7
C4orf48-201ENST00000409248 ITGBL1O95965 494 aaPredicted RBP25.63■■□□□ 1.69
C4orf48-201ENST00000409248 EGFRP00533 1210 aa25.63■■□□□ 1.69
C4orf48-201ENST00000409248 TFCP2Q12800 502 aa25.63■■□□□ 1.69
C4orf48-201ENST00000409248 GNL3LQ9NVN8 582 aaKnown RBP25.63■■□□□ 1.69
C4orf48-201ENST00000409248 JAG2Q9Y219 1238 aa25.63■■□□□ 1.69
C4orf48-201ENST00000409248 SURF6O75683 361 aaKnown RBP25.62■■□□□ 1.69
C4orf48-201ENST00000409248 MFSD14BQ5SR56 506 aa25.62■■□□□ 1.69
C4orf48-201ENST00000409248 SIRT2Q8IXJ6 389 aa25.62■■□□□ 1.69
C4orf48-201ENST00000409248 CERS5Q8N5B7 392 aa25.62■■□□□ 1.69
C4orf48-201ENST00000409248 TBC1D22AQ8WUA7 517 aa25.62■■□□□ 1.69
C4orf48-201ENST00000409248 IQSEC3Q9UPP2 1182 aaPredicted RBP25.62■■□□□ 1.69
C4orf48-201ENST00000409248 CHAF1AQ13111 956 aaPredicted RBP25.61■■□□□ 1.69
C4orf48-201ENST00000409248 NOP58Q9Y2X3 529 aaKnown RBP25.61■■□□□ 1.69
C4orf48-201ENST00000409248 TRPM7Q96QT4 1865 aa25.61■■□□□ 1.69
C4orf48-201ENST00000409248 A0A1B0GUL7 405 aa25.6■■□□□ 1.69
C4orf48-201ENST00000409248 DCPSQ96C86 337 aaKnown RBP25.6■■□□□ 1.69
C4orf48-201ENST00000409248 GGA3Q9NZ52 723 aa25.6■■□□□ 1.69
C4orf48-201ENST00000409248 CDC37L1Q7L3B6 337 aa25.59■■□□□ 1.69
C4orf48-201ENST00000409248 SEMA3EO15041 775 aa25.58■■□□□ 1.69
C4orf48-201ENST00000409248 CREBZFQ9NS37 354 aa25.58■■□□□ 1.69
C4orf48-201ENST00000409248 ECM29Q5VYK3 1845 aa25.58■■□□□ 1.68
C4orf48-201ENST00000409248 F8W031 263 aaPredicted RBP25.57■■□□□ 1.68
C4orf48-201ENST00000409248 ADORA1P30542 326 aa25.57■■□□□ 1.68
C4orf48-201ENST00000409248 SCARF1Q14162 830 aa25.57■■□□□ 1.68
C4orf48-201ENST00000409248 HSP90AB4PQ58FF6 505 aa25.57■■□□□ 1.68
C4orf48-201ENST00000409248 ERC1Q8IUD2 1116 aa25.57■■□□□ 1.68
C4orf48-201ENST00000409248 GLIS2Q9BZE0 524 aaPredicted RBP25.57■■□□□ 1.68
C4orf48-201ENST00000409248 GPR108Q9NPR9 543 aa25.57■■□□□ 1.68
C4orf48-201ENST00000409248 PITPNM2Q9BZ72 1349 aa25.57■■□□□ 1.68
C4orf48-201ENST00000409248 COL1A1P02452 1464 aaPredicted RBP25.56■■□□□ 1.68
C4orf48-201ENST00000409248 PHKA1P46020 1223 aa25.56■■□□□ 1.68
C4orf48-201ENST00000409248 TIMM10P62072 90 aa25.56■■□□□ 1.68
C4orf48-201ENST00000409248 CCDC102BQ68D86 513 aa25.56■■□□□ 1.68
C4orf48-201ENST00000409248 KRT26Q7Z3Y9 468 aa25.56■■□□□ 1.68
C4orf48-201ENST00000409248 SULF1Q8IWU6 871 aa25.56■■□□□ 1.68
C4orf48-201ENST00000409248 WDR66Q8TBY9 1149 aa25.56■■□□□ 1.68
C4orf48-201ENST00000409248 XAGE2Q96GT9 111 aa25.56■■□□□ 1.68
C4orf48-201ENST00000409248 NEUROD6Q96NK8 337 aa25.56■■□□□ 1.68
C4orf48-201ENST00000409248 TMEM88BA6NKF7 163 aa25.55■■□□□ 1.68
C4orf48-201ENST00000409248 ZBTB22O15209 634 aa25.55■■□□□ 1.68
C4orf48-201ENST00000409248 HDAC1Q13547 482 aaPredicted RBP25.55■■□□□ 1.68
C4orf48-201ENST00000409248 DLGAP5Q15398 846 aa25.55■■□□□ 1.68
C4orf48-201ENST00000409248 GORABQ5T7V8 394 aa25.55■■□□□ 1.68
C4orf48-201ENST00000409248 ANGEL2Q5VTE6 544 aaKnown RBP25.55■■□□□ 1.68
C4orf48-201ENST00000409248 ERICH6BQ5W0A0 696 aa25.55■■□□□ 1.68
C4orf48-201ENST00000409248 RWDD1Q9H446 243 aaPredicted RBP25.55■■□□□ 1.68
C4orf48-201ENST00000409248 DENND2AQ9ULE3 1009 aa25.55■■□□□ 1.68
C4orf48-201ENST00000409248 TTF2Q9UNY4 1162 aaKnown RBP25.55■■□□□ 1.68
C4orf48-201ENST00000409248 SUGT1Q9Y2Z0 365 aa25.55■■□□□ 1.68
C4orf48-201ENST00000409248 POLR2AP24928 1970 aaKnown RBP25.55■■□□□ 1.68
C4orf48-201ENST00000409248 TRAF5O00463 557 aa25.54■■□□□ 1.68
C4orf48-201ENST00000409248 WNT10BO00744 389 aa25.54■■□□□ 1.68
C4orf48-201ENST00000409248 MTMR14Q8NCE2 650 aa25.54■■□□□ 1.68
C4orf48-201ENST00000409248 MAST3O60307 1309 aa25.54■■□□□ 1.68
C4orf48-201ENST00000409248 NBPF9Q3BBW0 867 aa25.53■■□□□ 1.68
C4orf48-201ENST00000409248 TNNI3KQ59H18 835 aa25.53■■□□□ 1.68
C4orf48-201ENST00000409248 EXOC6BQ9Y2D4 811 aa25.53■■□□□ 1.68
C4orf48-201ENST00000409248 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.53■■□□□ 1.68
C4orf48-201ENST00000409248 FPGT-TNNI3KV9GXZ4 949 aa25.53■■□□□ 1.68
C4orf48-201ENST00000409248 ASTN2O75129 1339 aaPredicted RBP25.53■■□□□ 1.68
C4orf48-201ENST00000409248 PDS5AQ29RF7 1337 aaKnown RBP25.53■■□□□ 1.68
C4orf48-201ENST00000409248 HTRA3P83110 453 aa25.52■■□□□ 1.68
C4orf48-201ENST00000409248 CFAP100Q494V2 611 aa25.52■■□□□ 1.68
C4orf48-201ENST00000409248 USP48Q86UV5 1035 aa25.52■■□□□ 1.68
C4orf48-201ENST00000409248 ZBED3Q96IU2 234 aaPredicted RBP25.52■■□□□ 1.68
C4orf48-201ENST00000409248 SERPINA10Q9UK55 444 aa25.52■■□□□ 1.68
C4orf48-201ENST00000409248 MYO1BO43795 1136 aa25.51■■□□□ 1.67
C4orf48-201ENST00000409248 RBM5P52756 815 aaKnown RBP eCLIP25.51■■□□□ 1.67
C4orf48-201ENST00000409248 SPDYE2BA6NHP3 402 aa25.5■■□□□ 1.67
C4orf48-201ENST00000409248 ADM5C9JUS6 153 aa25.5■■□□□ 1.67
C4orf48-201ENST00000409248 RAB11FIP3O75154 756 aa25.5■■□□□ 1.67
C4orf48-201ENST00000409248 SPDYE6P0CI01 402 aa25.5■■□□□ 1.67
C4orf48-201ENST00000409248 APOBEC3FQ8IUX4 373 aaKnown RBP25.5■■□□□ 1.67
C4orf48-201ENST00000409248 ZGPATQ8N5A5 531 aaKnown RBP25.5■■□□□ 1.67
C4orf48-201ENST00000409248 DCTPP1Q9H773 170 aa25.5■■□□□ 1.67
C4orf48-201ENST00000409248 SALL1Q9NSC2 1324 aa25.5■■□□□ 1.67
C4orf48-201ENST00000409248 CELF2O95319 508 aaKnown RBP25.49■■□□□ 1.67
C4orf48-201ENST00000409248 HDLBPQ00341 1268 aaKnown RBP25.49■■□□□ 1.67
C4orf48-201ENST00000409248 RASGRF1Q13972 1273 aa25.49■■□□□ 1.67
C4orf48-201ENST00000409248 UQCRFS1P1P0C7P4 283 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms