RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 PPM1HQ9ULR3 514 aa10.51□□□□□ -0.73
PTPN12-202ENST00000407343 SCAMP3O14828 347 aaKnown RBP10.5□□□□□ -0.73
PTPN12-202ENST00000407343 LILRB5O75023 590 aa10.5□□□□□ -0.73
PTPN12-202ENST00000407343 TCF3P15923 654 aa10.5□□□□□ -0.73
PTPN12-202ENST00000407343 ITGAEP38570 1179 aa10.5□□□□□ -0.73
PTPN12-202ENST00000407343 HDLBPQ00341 1268 aaKnown RBP10.5□□□□□ -0.73
PTPN12-202ENST00000407343 ZNF423Q2M1K9 1284 aa10.5□□□□□ -0.73
PTPN12-202ENST00000407343 RPS26P11Q5JNZ5 115 aaPredicted RBP10.5□□□□□ -0.73
PTPN12-202ENST00000407343 CDC27P30260 824 aa10.49□□□□□ -0.73
PTPN12-202ENST00000407343 TAF1CQ15572 869 aaPredicted RBP10.49□□□□□ -0.73
PTPN12-202ENST00000407343 BCL11AQ9H165 835 aa10.49□□□□□ -0.73
PTPN12-202ENST00000407343 CLEC4MQ9H2X3 399 aaPredicted RBP10.49□□□□□ -0.73
PTPN12-202ENST00000407343 PPP4R2Q9NY27 417 aa10.49□□□□□ -0.73
PTPN12-202ENST00000407343 FBXO24O75426 580 aa10.48□□□□□ -0.73
PTPN12-202ENST00000407343 SNRPNP63162 240 aaKnown RBP10.48□□□□□ -0.73
PTPN12-202ENST00000407343 HGSNATQ68CP4 663 aa10.48□□□□□ -0.73
PTPN12-202ENST00000407343 LINC00114Q6XXX2 140 aa10.48□□□□□ -0.73
PTPN12-202ENST00000407343 CACTIN-AS1Q8N1I8 211 aa10.48□□□□□ -0.73
PTPN12-202ENST00000407343 SVOPQ8N4V2 548 aa10.48□□□□□ -0.73
PTPN12-202ENST00000407343 IL22RA1Q8N6P7 574 aa10.48□□□□□ -0.73
PTPN12-202ENST00000407343 SEC31BQ9NQW1 1179 aa10.48□□□□□ -0.73
PTPN12-202ENST00000407343 METTL5Q9NRN9 209 aaKnown RBP10.48□□□□□ -0.73
PTPN12-202ENST00000407343 AKAP2Q9Y2D5 859 aa10.48□□□□□ -0.73
PTPN12-202ENST00000407343 ENC1O14682 589 aa10.47□□□□□ -0.73
PTPN12-202ENST00000407343 B3GALT4O96024 378 aa10.47□□□□□ -0.73
PTPN12-202ENST00000407343 ESRRAP11474 423 aaPredicted RBP10.47□□□□□ -0.73
PTPN12-202ENST00000407343 PCDH1Q08174 1060 aa10.47□□□□□ -0.73
PTPN12-202ENST00000407343 MSL1Q68DK7 614 aa10.47□□□□□ -0.73
PTPN12-202ENST00000407343 TRIM11Q96F44 468 aa10.46□□□□□ -0.73
PTPN12-202ENST00000407343 NECAB3Q96P71 396 aaPredicted RBP10.46□□□□□ -0.73
PTPN12-202ENST00000407343 TTF2Q9UNY4 1162 aaKnown RBP10.46□□□□□ -0.73
PTPN12-202ENST00000407343 H3BRJ5 948 aa10.45□□□□□ -0.74
PTPN12-202ENST00000407343 SOX1O00570 391 aaPredicted RBP10.45□□□□□ -0.74
PTPN12-202ENST00000407343 CELA3AP09093 270 aa10.45□□□□□ -0.74
PTPN12-202ENST00000407343 AMPD1P23109 780 aa10.45□□□□□ -0.74
PTPN12-202ENST00000407343 RAD51AP2Q09MP3 1159 aa10.45□□□□□ -0.74
PTPN12-202ENST00000407343 TPTE2Q6XPS3 522 aa10.45□□□□□ -0.74
PTPN12-202ENST00000407343 ERMP1Q7Z2K6 904 aa10.45□□□□□ -0.74
PTPN12-202ENST00000407343 TRIM56Q9BRZ2 755 aaKnown RBP10.45□□□□□ -0.74
PTPN12-202ENST00000407343 ZNF76P36508 570 aa10.44□□□□□ -0.74
PTPN12-202ENST00000407343 TXNDC11Q6PKC3 985 aa10.44□□□□□ -0.74
PTPN12-202ENST00000407343 NOC4LQ9BVI4 516 aaKnown RBP10.44□□□□□ -0.74
PTPN12-202ENST00000407343 ZFYVE1Q9HBF4 777 aa10.44□□□□□ -0.74
PTPN12-202ENST00000407343 PAGE1O75459 146 aa10.43□□□□□ -0.74
PTPN12-202ENST00000407343 SETDB1Q15047 1291 aa10.43□□□□□ -0.74
PTPN12-202ENST00000407343 C9orf131Q5VYM1 1079 aa10.43□□□□□ -0.74
PTPN12-202ENST00000407343 WFDC8Q8IUA0 241 aa10.43□□□□□ -0.74
PTPN12-202ENST00000407343 NRSN2Q9GZP1 204 aa10.43□□□□□ -0.74
PTPN12-202ENST00000407343 PPME1Q9Y570 386 aa10.43□□□□□ -0.74
PTPN12-202ENST00000407343 LINC01387J3KSC0 135 aa10.42□□□□□ -0.74
PTPN12-202ENST00000407343 DEAF1O75398 565 aaPredicted RBP10.42□□□□□ -0.74
PTPN12-202ENST00000407343 RASIP1Q5U651 963 aa10.42□□□□□ -0.74
PTPN12-202ENST00000407343 SV2BQ7L1I2 683 aa10.42□□□□□ -0.74
PTPN12-202ENST00000407343 NEDD1Q8NHV4 660 aa10.42□□□□□ -0.74
PTPN12-202ENST00000407343 ZNF157P51786 506 aaPredicted RBP10.41□□□□□ -0.74
PTPN12-202ENST00000407343 IKBKEQ14164 716 aa10.41□□□□□ -0.74
PTPN12-202ENST00000407343 DMRTC2Q8IXT2 367 aaPredicted RBP10.41□□□□□ -0.74
PTPN12-202ENST00000407343 ZSCAN1Q8NBB4 408 aa10.41□□□□□ -0.74
PTPN12-202ENST00000407343 GALNT11Q8NCW6 608 aa10.41□□□□□ -0.74
PTPN12-202ENST00000407343 STK35Q8TDR2 534 aa10.41□□□□□ -0.74
PTPN12-202ENST00000407343 RNF34Q969K3 372 aa10.41□□□□□ -0.74
PTPN12-202ENST00000407343 SOX17Q9H6I2 414 aaPredicted RBP10.41□□□□□ -0.74
PTPN12-202ENST00000407343 COPRSQ9NQ92 184 aa10.41□□□□□ -0.74
PTPN12-202ENST00000407343 ENAMQ9NRM1 1142 aa10.41□□□□□ -0.74
PTPN12-202ENST00000407343 CDC25BP30305 580 aa10.4□□□□□ -0.74
PTPN12-202ENST00000407343 CCDC85BQ15834 202 aaPredicted RBP10.4□□□□□ -0.74
PTPN12-202ENST00000407343 WNT8BQ93098 351 aa10.4□□□□□ -0.74
PTPN12-202ENST00000407343 CEP44Q9C0F1 390 aa10.4□□□□□ -0.74
PTPN12-202ENST00000407343 TMEM39AQ9NV64 488 aa10.4□□□□□ -0.74
PTPN12-202ENST00000407343 FSCN2O14926 492 aa10.39□□□□□ -0.75
PTPN12-202ENST00000407343 PIP4K2BP78356 416 aa10.39□□□□□ -0.75
PTPN12-202ENST00000407343 NT5DC4Q86YG4 428 aa10.39□□□□□ -0.75
PTPN12-202ENST00000407343 RRAGCQ9HB90 399 aa10.39□□□□□ -0.75
PTPN12-202ENST00000407343 SRA1Q9HD15 236 aaKnown RBP10.39□□□□□ -0.75
PTPN12-202ENST00000407343 GPN3Q9UHW5 284 aaPredicted RBP10.39□□□□□ -0.75
PTPN12-202ENST00000407343 BMP6P22004 513 aa10.38□□□□□ -0.75
PTPN12-202ENST00000407343 CABP4P57796 275 aa10.38□□□□□ -0.75
PTPN12-202ENST00000407343 RACK1P63244 317 aaKnown RBP10.38□□□□□ -0.75
PTPN12-202ENST00000407343 KLHDC7BQ96G42 594 aa10.38□□□□□ -0.75
PTPN12-202ENST00000407343 RSRP1Q9BUV0 290 aa10.38□□□□□ -0.75
PTPN12-202ENST00000407343 CARD10Q9BWT7 1032 aa10.38□□□□□ -0.75
PTPN12-202ENST00000407343 ADAM11O75078 769 aa10.37□□□□□ -0.75
PTPN12-202ENST00000407343 ZNF394Q53GI3 561 aa10.37□□□□□ -0.75
PTPN12-202ENST00000407343 HS2ST1Q7LGA3 356 aa10.37□□□□□ -0.75
PTPN12-202ENST00000407343 PDZD3Q86UT5 571 aa10.37□□□□□ -0.75
PTPN12-202ENST00000407343 OSGEPQ9NPF4 335 aa10.37□□□□□ -0.75
PTPN12-202ENST00000407343 DDX41Q9UJV9 622 aaKnown RBP10.37□□□□□ -0.75
PTPN12-202ENST00000407343 ADAMTS8Q9UP79 889 aa10.37□□□□□ -0.75
PTPN12-202ENST00000407343 A0A0A0MRY4 1105 aa10.36□□□□□ -0.75
PTPN12-202ENST00000407343 LIG3P49916 1009 aa10.36□□□□□ -0.75
PTPN12-202ENST00000407343 C19orf57Q0VDD7 668 aa10.36□□□□□ -0.75
PTPN12-202ENST00000407343 FOXD4L6Q3SYB3 417 aaPredicted RBP10.36□□□□□ -0.75
PTPN12-202ENST00000407343 FOXD4L3Q6VB84 417 aaPredicted RBP10.36□□□□□ -0.75
PTPN12-202ENST00000407343 DTWD1Q8N5C7 304 aa10.36□□□□□ -0.75
PTPN12-202ENST00000407343 PHC3Q8NDX5 983 aa10.36□□□□□ -0.75
PTPN12-202ENST00000407343 RHOVQ96L33 236 aa10.36□□□□□ -0.75
PTPN12-202ENST00000407343 KBTBD4Q9NVX7 518 aa10.36□□□□□ -0.75
PTPN12-202ENST00000407343 KCNK4Q9NYG8 393 aa10.36□□□□□ -0.75
PTPN12-202ENST00000407343 GGT7Q9UJ14 662 aa10.36□□□□□ -0.75
PTPN12-202ENST00000407343 PCDHGB7Q9Y5F8 929 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 172.3 ms