RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 LRP2BPQ9P2M1 347 aa13.88□□□□□ -0.19
PCNX4-204ENST00000406949 RESTQ13127 1097 aa13.88□□□□□ -0.19
PCNX4-204ENST00000406949 B4E1Z4 1266 aa13.87□□□□□ -0.19
PCNX4-204ENST00000406949 METAP2P50579 478 aaKnown RBP eCLIP13.87□□□□□ -0.19
PCNX4-204ENST00000406949 CASP7P55210 303 aa13.87□□□□□ -0.19
PCNX4-204ENST00000406949 TPD52L1Q16890 204 aaPredicted RBP13.87□□□□□ -0.19
PCNX4-204ENST00000406949 USPL1Q5W0Q7 1092 aa13.87□□□□□ -0.19
PCNX4-204ENST00000406949 LRP10Q7Z4F1 713 aa13.87□□□□□ -0.19
PCNX4-204ENST00000406949 DHX37Q8IY37 1157 aaKnown RBP13.87□□□□□ -0.19
PCNX4-204ENST00000406949 CEP57L1Q8IYX8 460 aa13.87□□□□□ -0.19
PCNX4-204ENST00000406949 ZBTB38Q8NAP3 1195 aaPredicted RBP13.87□□□□□ -0.19
PCNX4-204ENST00000406949 MYL10Q9BUA6 226 aa13.87□□□□□ -0.19
PCNX4-204ENST00000406949 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.87□□□□□ -0.19
PCNX4-204ENST00000406949 COL15A1P39059 1388 aa13.87□□□□□ -0.19
PCNX4-204ENST00000406949 TPM3P06753 285 aa13.87□□□□□ -0.19
PCNX4-204ENST00000406949 LLPHQ9BRT6 129 aaKnown RBP13.87□□□□□ -0.19
PCNX4-204ENST00000406949 ERICH2A1L162 156 aa13.87□□□□□ -0.19
PCNX4-204ENST00000406949 CCDC69A6NI79 296 aa13.87□□□□□ -0.19
PCNX4-204ENST00000406949 PCCAP05165 728 aaPredicted RBP13.87□□□□□ -0.19
PCNX4-204ENST00000406949 TPM4P67936 248 aa13.87□□□□□ -0.19
PCNX4-204ENST00000406949 MINDY4BA8MYZ0 360 aa13.86□□□□□ -0.19
PCNX4-204ENST00000406949 IFIT3O14879 490 aaKnown RBP13.86□□□□□ -0.19
PCNX4-204ENST00000406949 TMEM67Q5HYA8 995 aa13.86□□□□□ -0.19
PCNX4-204ENST00000406949 NAT10Q9H0A0 1025 aaKnown RBP13.86□□□□□ -0.19
PCNX4-204ENST00000406949 GPR108Q9NPR9 543 aa13.86□□□□□ -0.19
PCNX4-204ENST00000406949 SLIT3O75094 1523 aa13.86□□□□□ -0.19
PCNX4-204ENST00000406949 PHKA1P46020 1223 aa13.86□□□□□ -0.19
PCNX4-204ENST00000406949 STX1AQ16623 288 aa13.86□□□□□ -0.19
PCNX4-204ENST00000406949 TSGA10IPQ3SY00 556 aa13.86□□□□□ -0.19
PCNX4-204ENST00000406949 BBXQ8WY36 941 aaPredicted RBP13.86□□□□□ -0.19
PCNX4-204ENST00000406949 ELP1O95163 1332 aa13.86□□□□□ -0.19
PCNX4-204ENST00000406949 MIGA1Q8NAN2 632 aa13.86□□□□□ -0.19
PCNX4-204ENST00000406949 PIBF1Q8WXW3 757 aa13.86□□□□□ -0.19
PCNX4-204ENST00000406949 PHKBQ93100 1093 aa13.86□□□□□ -0.19
PCNX4-204ENST00000406949 MED1Q15648 1581 aaPredicted RBP13.86□□□□□ -0.19
PCNX4-204ENST00000406949 GOLGA8AA7E2F4 631 aa13.85□□□□□ -0.19
PCNX4-204ENST00000406949 CIAO1O76071 339 aa13.85□□□□□ -0.19
PCNX4-204ENST00000406949 SLC5A1P13866 664 aa13.85□□□□□ -0.19
PCNX4-204ENST00000406949 CTSWP56202 376 aa13.85□□□□□ -0.19
PCNX4-204ENST00000406949 MAP3K12Q12852 859 aa13.85□□□□□ -0.19
PCNX4-204ENST00000406949 LRMPQ12912 555 aa13.85□□□□□ -0.19
PCNX4-204ENST00000406949 GIGYF2Q6Y7W6 1299 aaKnown RBP13.85□□□□□ -0.19
PCNX4-204ENST00000406949 AOPEPQ8N6M6 819 aa13.85□□□□□ -0.19
PCNX4-204ENST00000406949 MAGEB6Q8N7X4 407 aa13.85□□□□□ -0.19
PCNX4-204ENST00000406949 MRPS27Q92552 414 aaKnown RBP13.85□□□□□ -0.19
PCNX4-204ENST00000406949 ZKSCAN3Q9BRR0 538 aa13.85□□□□□ -0.19
PCNX4-204ENST00000406949 ALG1Q9BT22 464 aa13.85□□□□□ -0.19
PCNX4-204ENST00000406949 ANO10Q9NW15 660 aa13.85□□□□□ -0.19
PCNX4-204ENST00000406949 ZNF532Q9HCE3 1301 aa13.85□□□□□ -0.19
PCNX4-204ENST00000406949 NRDCO43847 1150 aa13.85□□□□□ -0.19
PCNX4-204ENST00000406949 IGHMBP2P38935 993 aaKnown RBP13.85□□□□□ -0.19
PCNX4-204ENST00000406949 AKAP17AQ02040 695 aaKnown RBP13.85□□□□□ -0.19
PCNX4-204ENST00000406949 NAA16Q6N069 864 aaPredicted RBP13.85□□□□□ -0.19
PCNX4-204ENST00000406949 RAI14Q9P0K7 980 aa13.85□□□□□ -0.19
PCNX4-204ENST00000406949 PYCARDQ9ULZ3 195 aa13.85□□□□□ -0.19
PCNX4-204ENST00000406949 MAP3K15Q6ZN16 1313 aa13.85□□□□□ -0.19
PCNX4-204ENST00000406949 ADD1P35611 737 aaKnown RBP13.85□□□□□ -0.19
PCNX4-204ENST00000406949 TTF1Q15361 905 aaPredicted RBP13.85□□□□□ -0.19
PCNX4-204ENST00000406949 SAFBQ15424 915 aaKnown RBP eCLIP13.85□□□□□ -0.19
PCNX4-204ENST00000406949 NRBP1Q9UHY1 535 aa13.85□□□□□ -0.19
PCNX4-204ENST00000406949 KDM3BQ7LBC6 1761 aa13.85□□□□□ -0.19
PCNX4-204ENST00000406949 ATP6V1AP38606 617 aa13.84□□□□□ -0.19
PCNX4-204ENST00000406949 NLRP10Q86W26 655 aa13.84□□□□□ -0.19
PCNX4-204ENST00000406949 SLC26A6Q9BXS9 759 aa13.84□□□□□ -0.19
PCNX4-204ENST00000406949 ATG3Q9NT62 314 aa13.84□□□□□ -0.19
PCNX4-204ENST00000406949 MCAMP43121 646 aa13.84□□□□□ -0.19
PCNX4-204ENST00000406949 ISCA1Q9BUE6 129 aa13.84□□□□□ -0.19
PCNX4-204ENST00000406949 LMO7Q8WWI1 1683 aa13.84□□□□□ -0.19
PCNX4-204ENST00000406949 SPTLC2O15270 562 aa13.84□□□□□ -0.19
PCNX4-204ENST00000406949 CTAGE5O15320 804 aa13.84□□□□□ -0.19
PCNX4-204ENST00000406949 MBD4O95243 580 aa13.84□□□□□ -0.19
PCNX4-204ENST00000406949 SART3Q15020 963 aaKnown RBP13.84□□□□□ -0.19
PCNX4-204ENST00000406949 NACAP1Q9BZK3 213 aa13.84□□□□□ -0.19
PCNX4-204ENST00000406949 TRMT1Q9NXH9 659 aaKnown RBP13.84□□□□□ -0.19
PCNX4-204ENST00000406949 SLC12A7Q9Y666 1083 aa13.84□□□□□ -0.19
PCNX4-204ENST00000406949 CDKL5O76039 1030 aa13.83□□□□□ -0.2
PCNX4-204ENST00000406949 IARSP41252 1262 aaKnown RBP13.83□□□□□ -0.2
PCNX4-204ENST00000406949 CCDC102BQ68D86 513 aa13.83□□□□□ -0.2
PCNX4-204ENST00000406949 TTLL11Q8NHH1 800 aa13.83□□□□□ -0.2
PCNX4-204ENST00000406949 ZNF274Q96GC6 653 aaPredicted RBP13.83□□□□□ -0.2
PCNX4-204ENST00000406949 AIFM3Q96NN9 605 aa13.83□□□□□ -0.2
PCNX4-204ENST00000406949 ARMT1Q9H993 441 aa13.83□□□□□ -0.2
PCNX4-204ENST00000406949 RGPD5Q99666 1765 aa13.83□□□□□ -0.2
PCNX4-204ENST00000406949 CARMIL3Q8ND23 1372 aa13.83□□□□□ -0.2
PCNX4-204ENST00000406949 ZBTB43O43298 467 aa13.83□□□□□ -0.2
PCNX4-204ENST00000406949 CTDSPL2Q05D32 466 aa13.83□□□□□ -0.2
PCNX4-204ENST00000406949 FAM160A1Q05DH4 1040 aa13.83□□□□□ -0.2
PCNX4-204ENST00000406949 MTMR7Q9Y216 660 aa13.83□□□□□ -0.2
PCNX4-204ENST00000406949 NIP7Q9Y221 180 aaKnown RBP eCLIP13.83□□□□□ -0.2
PCNX4-204ENST00000406949 PDE8AO60658 829 aa13.82□□□□□ -0.2
PCNX4-204ENST00000406949 SLC3A2P08195 630 aaKnown RBP13.82□□□□□ -0.2
PCNX4-204ENST00000406949 INCENPQ9NQS7 918 aa13.82□□□□□ -0.2
PCNX4-204ENST00000406949 MARF1Q9Y4F3 1742 aaKnown RBP13.82□□□□□ -0.2
PCNX4-204ENST00000406949 AP5Z1O43299 807 aa13.82□□□□□ -0.2
PCNX4-204ENST00000406949 WWC3Q9ULE0 1092 aa13.82□□□□□ -0.2
PCNX4-204ENST00000406949 CLIC4Q9Y696 253 aa13.82□□□□□ -0.2
PCNX4-204ENST00000406949 CTDNEP1O95476 244 aa13.82□□□□□ -0.2
PCNX4-204ENST00000406949 ZNF75DP51815 510 aa13.82□□□□□ -0.2
PCNX4-204ENST00000406949 C11orf57Q6ZUT1 292 aaPredicted RBP13.82□□□□□ -0.2
PCNX4-204ENST00000406949 CREBRFQ8IUR6 639 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms