RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 ORC3Q9UBD5 711 aaPredicted RBP5.11□□□□□ -1.59
SMC6-203ENST00000402989 ZNF213O14771 459 aa5.11□□□□□ -1.59
SMC6-203ENST00000402989 KINO60870 393 aaKnown RBP5.11□□□□□ -1.59
SMC6-203ENST00000402989 CTDNEP1O95476 244 aa5.11□□□□□ -1.59
SMC6-203ENST00000402989 FGAP02671 866 aa5.11□□□□□ -1.59
SMC6-203ENST00000402989 PHKA1P46020 1223 aa5.11□□□□□ -1.59
SMC6-203ENST00000402989 NOLC1Q14978 699 aaKnown RBP eCLIP5.11□□□□□ -1.59
SMC6-203ENST00000402989 VSIG10Q8N0Z9 540 aa5.11□□□□□ -1.59
SMC6-203ENST00000402989 KCNB2Q92953 911 aa5.11□□□□□ -1.59
SMC6-203ENST00000402989 PHKBQ93100 1093 aa5.11□□□□□ -1.59
SMC6-203ENST00000402989 SCN11AQ9UI33 1791 aa5.11□□□□□ -1.59
SMC6-203ENST00000402989 OVOS2A0A0G2JMS6 1433 aa5.11□□□□□ -1.59
SMC6-203ENST00000402989 PKD1L3Q7Z443 1732 aa5.11□□□□□ -1.59
SMC6-203ENST00000402989 B4E1Z4 1266 aa5.11□□□□□ -1.59
SMC6-203ENST00000402989 ERVV-2B6SEH9 535 aa5.11□□□□□ -1.59
SMC6-203ENST00000402989 TPM2P07951 284 aa5.11□□□□□ -1.59
SMC6-203ENST00000402989 PDIA3P30101 505 aaKnown RBP5.11□□□□□ -1.59
SMC6-203ENST00000402989 TRDNQ13061 729 aa5.11□□□□□ -1.59
SMC6-203ENST00000402989 HSP90AA4PQ58FG1 418 aa5.11□□□□□ -1.59
SMC6-203ENST00000402989 DZIP3Q86Y13 1208 aaKnown RBP5.11□□□□□ -1.59
SMC6-203ENST00000402989 CMTR1Q8N1G2 835 aaKnown RBP5.11□□□□□ -1.59
SMC6-203ENST00000402989 MIGA1Q8NAN2 632 aa5.11□□□□□ -1.59
SMC6-203ENST00000402989 FAM200AQ8TCP9 573 aa5.11□□□□□ -1.59
SMC6-203ENST00000402989 C8orf76Q96K31 380 aa5.11□□□□□ -1.59
SMC6-203ENST00000402989 C16orf45Q96MC5 204 aaPredicted RBP5.11□□□□□ -1.59
SMC6-203ENST00000402989 GOLPH3LQ9H4A5 285 aa5.11□□□□□ -1.59
SMC6-203ENST00000402989 HELLSQ9NRZ9 838 aa5.11□□□□□ -1.59
SMC6-203ENST00000402989 ATG3Q9NT62 314 aa5.11□□□□□ -1.59
SMC6-203ENST00000402989 COL24A1Q17RW2 1714 aa5.11□□□□□ -1.59
SMC6-203ENST00000402989 ANKRD18BA2A2Z9 1011 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 UBE2Q2LH0YL09 131 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 MCAMP43121 646 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 CTDSPL2Q05D32 466 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 PTPN21Q16825 1174 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 C11orf57Q6ZUT1 292 aaPredicted RBP5.1□□□□□ -1.59
SMC6-203ENST00000402989 PIBF1Q8WXW3 757 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 IL17RAQ96F46 866 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 SEC31BQ9NQW1 1179 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 ABCF2Q9UG63 623 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 CFAP45Q9UL16 551 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 JAG2Q9Y219 1238 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 AKAP2Q9Y2D5 859 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 RREB1Q92766 1687 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 ZNF500O60304 480 aaPredicted RBP5.1□□□□□ -1.59
SMC6-203ENST00000402989 PFKFB2O60825 505 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 ADD1P35611 737 aaKnown RBP5.1□□□□□ -1.59
SMC6-203ENST00000402989 ARID5BQ14865 1188 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 USPL1Q5W0Q7 1092 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 NKX2-3Q8TAU0 364 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 CARD10Q9BWT7 1032 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 CLSTN2Q9H4D0 955 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 SENP2Q9HC62 589 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 PIH1D3Q9NQM4 214 aaKnown RBP5.1□□□□□ -1.59
SMC6-203ENST00000402989 WWC3Q9ULE0 1092 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 KIF3AQ9Y496 699 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 CLIC4Q9Y696 253 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 ARFGEF2Q9Y6D5 1785 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 SH3TC1Q8TE82 1336 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 GOLGB1Q14789 3259 aaKnown RBP5.1□□□□□ -1.59
SMC6-203ENST00000402989 GOLGA6L6A8MZA4 724 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 UVSSAQ2YD98 709 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 HS1BP3Q53T59 392 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 AIDAQ96BJ3 306 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 MPHOSPH8Q99549 860 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 ARMT1Q9H993 441 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 DDX19AQ9NUU7 478 aaKnown RBP5.1□□□□□ -1.59
SMC6-203ENST00000402989 CLIP2Q9UDT6 1046 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 MTMR7Q9Y216 660 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 ZNF532Q9HCE3 1301 aa5.1□□□□□ -1.59
SMC6-203ENST00000402989 HMGB1P09429 215 aaKnown RBP5.09□□□□□ -1.59
SMC6-203ENST00000402989 MCM5P33992 734 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 SPECC1Q5M775 1068 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 SYNE3Q6ZMZ3 975 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 NLRP10Q86W26 655 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 AOPEPQ8N6M6 819 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 MAGEB6Q8N7X4 407 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 NUP133Q8WUM0 1156 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 FUCA2Q9BTY2 467 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 DSCC1Q9BVC3 393 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.09□□□□□ -1.596e-6■■■□□ 19.2
SMC6-203ENST00000402989 KCNF1Q9H3M0 494 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 TRMT1Q9NXH9 659 aaKnown RBP5.09□□□□□ -1.59
SMC6-203ENST00000402989 hCG_1642624A0A1W2PR95 340 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 MINDY4BA8MYZ0 360 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 EXOC5O00471 708 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 NPHP1O15259 732 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 PRKAB2O43741 272 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 MBD4O95243 580 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 GTF2E1P29083 439 aaPredicted RBP5.09□□□□□ -1.59
SMC6-203ENST00000402989 CTSWP56202 376 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 ZBTB38Q8NAP3 1195 aaPredicted RBP5.09□□□□□ -1.59
SMC6-203ENST00000402989 TTLL11Q8NHH1 800 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 NCOA7Q8NI08 942 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 ZNF396Q96N95 335 aaPredicted RBP5.09□□□□□ -1.59
SMC6-203ENST00000402989 SLC4A9Q96Q91 983 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 ISCA1Q9BUE6 129 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 CTNNA3Q9UI47 895 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 CARMIL3Q8ND23 1372 aa5.09□□□□□ -1.59
SMC6-203ENST00000402989 WTIPA6NIX2 430 aaPredicted RBP5.09□□□□□ -1.6
SMC6-203ENST00000402989 SMC2O95347 1197 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms