RNA–Protein interactions for RNA: ENST00000401447.1

RPA3-203, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-203ENST00000401447 KIAA0319Q5VV43 1072 aa6.26□□□□□ -1.41
RPA3-203ENST00000401447 ILDR2Q71H61 639 aa6.26□□□□□ -1.41
RPA3-203ENST00000401447 CCNJLQ8IV13 435 aa6.26□□□□□ -1.41
RPA3-203ENST00000401447 WNT8BQ93098 351 aa6.26□□□□□ -1.41
RPA3-203ENST00000401447 CARD10Q9BWT7 1032 aa6.26□□□□□ -1.41
RPA3-203ENST00000401447 KRTAP4-8Q9BYQ9 185 aa6.26□□□□□ -1.41
RPA3-203ENST00000401447 SEC31BQ9NQW1 1179 aa6.26□□□□□ -1.41
RPA3-203ENST00000401447 SOX13Q9UN79 622 aa6.26□□□□□ -1.41
RPA3-203ENST00000401447 DLL1O00548 723 aa6.25□□□□□ -1.41
RPA3-203ENST00000401447 FSCN2O14926 492 aa6.25□□□□□ -1.41
RPA3-203ENST00000401447 SELPP16109 830 aa6.25□□□□□ -1.41
RPA3-203ENST00000401447 IKBKEQ14164 716 aa6.25□□□□□ -1.41
RPA3-203ENST00000401447 IGF2-ASQ6U949 168 aa6.25□□□□□ -1.41
RPA3-203ENST00000401447 SHISA2Q6UWI4 295 aa6.25□□□□□ -1.41
RPA3-203ENST00000401447 ADAMTSL4Q6UY14 1074 aa6.25□□□□□ -1.41
RPA3-203ENST00000401447 KLHL23Q8NBE8 558 aa6.25□□□□□ -1.41
RPA3-203ENST00000401447 FBF1Q8TES7 1133 aa6.25□□□□□ -1.41
RPA3-203ENST00000401447 SLC7A3Q8WY07 619 aa6.25□□□□□ -1.41
RPA3-203ENST00000401447 LENG1Q96BZ8 264 aaPredicted RBP6.25□□□□□ -1.41
RPA3-203ENST00000401447 A0A096LPE4 126 aa6.24□□□□□ -1.41
RPA3-203ENST00000401447 A0A1W2PPZ6 126 aa6.24□□□□□ -1.41
RPA3-203ENST00000401447 METTL12A8MUP2 240 aa6.24□□□□□ -1.41
RPA3-203ENST00000401447 CD68P34810 354 aaPredicted RBP6.24□□□□□ -1.41
RPA3-203ENST00000401447 ALG1LQ6GMV1 187 aa6.24□□□□□ -1.41
RPA3-203ENST00000401447 EPS8L3Q8TE67 593 aaKnown RBP6.24□□□□□ -1.41
RPA3-203ENST00000401447 TCF12Q99081 682 aa6.24□□□□□ -1.41
RPA3-203ENST00000401447 MRPL18Q9H0U6 180 aaKnown RBP6.24□□□□□ -1.41
RPA3-203ENST00000401447 ANKRD33BA6NCL7 494 aa6.23□□□□□ -1.41
RPA3-203ENST00000401447 EIF4EBP3O60516 100 aaPredicted RBP6.23□□□□□ -1.41
RPA3-203ENST00000401447 P4HBP07237 508 aaKnown RBP6.23□□□□□ -1.41
RPA3-203ENST00000401447 GATA4P43694 442 aa6.23□□□□□ -1.41
RPA3-203ENST00000401447 FGD1P98174 961 aa6.23□□□□□ -1.41
RPA3-203ENST00000401447 C19orf57Q0VDD7 668 aa6.23□□□□□ -1.41
RPA3-203ENST00000401447 MBTPS1Q14703 1052 aa6.23□□□□□ -1.41
RPA3-203ENST00000401447 PRPF40BQ6NWY9 871 aaKnown RBP6.23□□□□□ -1.41
RPA3-203ENST00000401447 VN1R5Q7Z5H4 357 aa6.23□□□□□ -1.41
RPA3-203ENST00000401447 TXNRD3Q86VQ6 643 aa6.23□□□□□ -1.41
RPA3-203ENST00000401447 CLEC4MQ9H2X3 399 aaPredicted RBP6.23□□□□□ -1.41
RPA3-203ENST00000401447 OSGEPQ9NPF4 335 aa6.23□□□□□ -1.41
RPA3-203ENST00000401447 PPP4R2Q9NY27 417 aa6.23□□□□□ -1.41
RPA3-203ENST00000401447 LDHBP07195 334 aaKnown RBP6.22□□□□□ -1.41
RPA3-203ENST00000401447 GRIA4P48058 902 aa6.22□□□□□ -1.41
RPA3-203ENST00000401447 DOC2BQ14184 412 aa6.22□□□□□ -1.41
RPA3-203ENST00000401447 ADGRE1Q14246 886 aa6.22□□□□□ -1.41
RPA3-203ENST00000401447 GRM2Q14416 872 aa6.22□□□□□ -1.41
RPA3-203ENST00000401447 COL19A1Q14993 1142 aa6.22□□□□□ -1.41
RPA3-203ENST00000401447 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.22□□□□□ -1.41
RPA3-203ENST00000401447 PI16Q6UXB8 463 aa6.22□□□□□ -1.41
RPA3-203ENST00000401447 GALNT11Q8NCW6 608 aa6.22□□□□□ -1.41
RPA3-203ENST00000401447 ABCB6Q9NP58 842 aa6.22□□□□□ -1.41
RPA3-203ENST00000401447 SPG7Q9UQ90 795 aa6.22□□□□□ -1.41
RPA3-203ENST00000401447 ESRRAP11474 423 aaPredicted RBP6.21□□□□□ -1.42
RPA3-203ENST00000401447 NLRP12P59046 1061 aa6.21□□□□□ -1.42
RPA3-203ENST00000401447 PCDH1Q08174 1060 aa6.21□□□□□ -1.42
RPA3-203ENST00000401447 SPRED3Q2MJR0 410 aa6.21□□□□□ -1.42
RPA3-203ENST00000401447 FOXD4L6Q3SYB3 417 aaPredicted RBP6.21□□□□□ -1.42
RPA3-203ENST00000401447 EAPPQ56P03 285 aaPredicted RBP6.21□□□□□ -1.42
RPA3-203ENST00000401447 FOXD4L3Q6VB84 417 aaPredicted RBP6.21□□□□□ -1.42
RPA3-203ENST00000401447 DTHD1Q6ZMT9 781 aa6.21□□□□□ -1.42
RPA3-203ENST00000401447 ACAD11Q709F0 780 aa6.21□□□□□ -1.42
RPA3-203ENST00000401447 DDX54Q8TDD1 881 aaKnown RBP6.21□□□□□ -1.42
RPA3-203ENST00000401447 ZNF576Q9H609 170 aa6.21□□□□□ -1.42
RPA3-203ENST00000401447 SOX17Q9H6I2 414 aaPredicted RBP6.21□□□□□ -1.42
RPA3-203ENST00000401447 SCRIBQ14160 1630 aa6.21□□□□□ -1.42
RPA3-203ENST00000401447 TMEM238LA0A1B0GVL6 79 aa6.2□□□□□ -1.42
RPA3-203ENST00000401447 XRCC5P13010 732 aaKnown RBP6.2□□□□□ -1.42
RPA3-203ENST00000401447 ERCC3P19447 782 aa6.2□□□□□ -1.42
RPA3-203ENST00000401447 ITPKAP23677 461 aa6.2□□□□□ -1.42
RPA3-203ENST00000401447 PTPN12Q05209 780 aaKnown RBP6.2□□□□□ -1.42
RPA3-203ENST00000401447 DUOXA2Q1HG44 320 aa6.2□□□□□ -1.42
RPA3-203ENST00000401447 TMCO4Q5TGY1 634 aa6.2□□□□□ -1.42
RPA3-203ENST00000401447 KLHDC7BQ96G42 594 aa6.2□□□□□ -1.42
RPA3-203ENST00000401447 BCO2Q9BYV7 579 aa6.2□□□□□ -1.42
RPA3-203ENST00000401447 SRCIN1Q9C0H9 1055 aa6.2□□□□□ -1.42
RPA3-203ENST00000401447 SEMA6BQ9H3T3 888 aa6.2□□□□□ -1.42
RPA3-203ENST00000401447 AKTIPQ9H8T0 292 aa6.2□□□□□ -1.42
RPA3-203ENST00000401447 ZFYVE1Q9HBF4 777 aa6.2□□□□□ -1.42
RPA3-203ENST00000401447 PRPF40AO75400 957 aaKnown RBP6.19□□□□□ -1.42
RPA3-203ENST00000401447 IREB2P48200 963 aaKnown RBP6.19□□□□□ -1.42
RPA3-203ENST00000401447 FCGRTP55899 365 aa6.19□□□□□ -1.42
RPA3-203ENST00000401447 GSTM4Q03013 218 aa6.19□□□□□ -1.42
RPA3-203ENST00000401447 RSPO4Q2I0M5 234 aaPredicted RBP6.19□□□□□ -1.42
RPA3-203ENST00000401447 NKAPLQ5M9Q1 402 aa6.19□□□□□ -1.42
RPA3-203ENST00000401447 DNAJC14Q6Y2X3 702 aaPredicted RBP6.19□□□□□ -1.42
RPA3-203ENST00000401447 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.19□□□□□ -1.42
RPA3-203ENST00000401447 NPAS4Q8IUM7 802 aa6.19□□□□□ -1.42
RPA3-203ENST00000401447 WFDC12Q8WWY7 111 aa6.19□□□□□ -1.42
RPA3-203ENST00000401447 FOXD4L4Q8WXT5 416 aaPredicted RBP6.19□□□□□ -1.42
RPA3-203ENST00000401447 SETDB2Q96T68 719 aa6.19□□□□□ -1.42
RPA3-203ENST00000401447 USP26Q9BXU7 913 aa6.19□□□□□ -1.42
RPA3-203ENST00000401447 F8W735 103 aaPredicted RBP6.18□□□□□ -1.42
RPA3-203ENST00000401447 SOX1O00570 391 aaPredicted RBP6.18□□□□□ -1.42
RPA3-203ENST00000401447 GIPC1O14908 333 aa6.18□□□□□ -1.42
RPA3-203ENST00000401447 DDX3YO15523 660 aaKnown RBP6.18□□□□□ -1.42
RPA3-203ENST00000401447 ADAM11O75078 769 aa6.18□□□□□ -1.42
RPA3-203ENST00000401447 B3GALT4O96024 378 aa6.18□□□□□ -1.42
RPA3-203ENST00000401447 GLB1P16278 677 aa6.18□□□□□ -1.42
RPA3-203ENST00000401447 GSTT1P30711 240 aa6.18□□□□□ -1.42
RPA3-203ENST00000401447 RPS26P11Q5JNZ5 115 aaPredicted RBP6.18□□□□□ -1.42
RPA3-203ENST00000401447 NXPE4Q6UWF7 544 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms