RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 SPOUT1Q5T280 376 aaKnown RBP15.59■□□□□ 0.09
VAPA-202ENST00000400000 LETM2Q2VYF4 491 aa15.58■□□□□ 0.09
VAPA-202ENST00000400000 LDHBP07195 334 aaKnown RBP15.58■□□□□ 0.08
VAPA-202ENST00000400000 RHOXF2BP0C7M4 288 aa15.58■□□□□ 0.08
VAPA-202ENST00000400000 HMGB2P26583 209 aaKnown RBP15.58■□□□□ 0.08
VAPA-202ENST00000400000 RHOXF2Q9BQY4 288 aa15.58■□□□□ 0.08
VAPA-202ENST00000400000 MAGI1Q96QZ7 1491 aaPredicted RBP15.58■□□□□ 0.08
VAPA-202ENST00000400000 WDR7Q9Y4E6 1490 aa15.58■□□□□ 0.08
VAPA-202ENST00000400000 UBE2HP62256 183 aa15.58■□□□□ 0.08
VAPA-202ENST00000400000 TIGD1Q96MW7 591 aa15.58■□□□□ 0.08
VAPA-202ENST00000400000 RMND1Q9NWS8 449 aa15.58■□□□□ 0.08
VAPA-202ENST00000400000 DACT1Q9NYF0 836 aa15.58■□□□□ 0.08
VAPA-202ENST00000400000 ODF2LQ9ULJ1 636 aa15.58■□□□□ 0.08
VAPA-202ENST00000400000 BICC1Q9H694 974 aaKnown RBP15.58■□□□□ 0.08
VAPA-202ENST00000400000 KIF4AO95239 1232 aa15.58■□□□□ 0.08
VAPA-202ENST00000400000 KANK3Q6NY19 840 aa15.58■□□□□ 0.08
VAPA-202ENST00000400000 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.58■□□□□ 0.08
VAPA-202ENST00000400000 HAUS7Q99871 368 aa15.58■□□□□ 0.08
VAPA-202ENST00000400000 FAM89AQ96GI7 184 aa15.57■□□□□ 0.08
VAPA-202ENST00000400000 BMS1Q14692 1282 aaKnown RBP15.57■□□□□ 0.08
VAPA-202ENST00000400000 ATRIPQ8WXE1 791 aa15.57■□□□□ 0.08
VAPA-202ENST00000400000 MAK16Q9BXY0 300 aaKnown RBP15.57■□□□□ 0.08
VAPA-202ENST00000400000 PPIP5K1Q6PFW1 1433 aa15.57■□□□□ 0.08
VAPA-202ENST00000400000 PTPDC1A2A3K4 754 aa15.57■□□□□ 0.08
VAPA-202ENST00000400000 VWA3AA6NCI4 1184 aa15.57■□□□□ 0.08
VAPA-202ENST00000400000 ZNF594Q96JF6 807 aaPredicted RBP15.57■□□□□ 0.08
VAPA-202ENST00000400000 ZBTB16Q05516 673 aa15.57■□□□□ 0.08
VAPA-202ENST00000400000 CKAP4Q07065 602 aaKnown RBP15.57■□□□□ 0.08
VAPA-202ENST00000400000 BIRC3Q13489 604 aa15.57■□□□□ 0.08
VAPA-202ENST00000400000 GEN1Q17RS7 908 aa15.57■□□□□ 0.08
VAPA-202ENST00000400000 ANO3Q9BYT9 981 aa15.57■□□□□ 0.08
VAPA-202ENST00000400000 NYXQ9GZU5 481 aa15.57■□□□□ 0.08
VAPA-202ENST00000400000 TAF5LO75529 589 aa15.57■□□□□ 0.08
VAPA-202ENST00000400000 GSDMDP57764 484 aa15.57■□□□□ 0.08
VAPA-202ENST00000400000 ZGPATQ8N5A5 531 aaKnown RBP15.57■□□□□ 0.08
VAPA-202ENST00000400000 PLEKHA4Q9H4M7 779 aa15.57■□□□□ 0.08
VAPA-202ENST00000400000 MICALCLQ6ZW33 695 aa15.57■□□□□ 0.08
VAPA-202ENST00000400000 KLHDC4Q8TBB5 520 aa15.57■□□□□ 0.08
VAPA-202ENST00000400000 PICK1Q9NRD5 415 aa15.57■□□□□ 0.08
VAPA-202ENST00000400000 CTNND2Q9UQB3 1225 aa15.57■□□□□ 0.08
VAPA-202ENST00000400000 KIF2AO00139 706 aaPredicted RBP15.56■□□□□ 0.08
VAPA-202ENST00000400000 SYT1P21579 422 aa15.56■□□□□ 0.08
VAPA-202ENST00000400000 CCNL1Q9UK58 526 aaPredicted RBP15.56■□□□□ 0.08
VAPA-202ENST00000400000 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.56■□□□□ 0.08
VAPA-202ENST00000400000 PPANQ9NQ55 473 aaKnown RBP15.56■□□□□ 0.08
VAPA-202ENST00000400000 TTLL3Q9Y4R7 772 aa15.56■□□□□ 0.08
VAPA-202ENST00000400000 CCDC186Q7Z3E2 898 aa15.56■□□□□ 0.08
VAPA-202ENST00000400000 KSR1Q8IVT5 923 aa15.56■□□□□ 0.08
VAPA-202ENST00000400000 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.56■□□□□ 0.083e-6■□□□□ 9.1
VAPA-202ENST00000400000 hCG_1642624A0A1W2PR95 340 aa15.56■□□□□ 0.08
VAPA-202ENST00000400000 CPXCR1Q8N123 301 aa15.56■□□□□ 0.08
VAPA-202ENST00000400000 SELENOOQ9BVL4 669 aa15.56■□□□□ 0.08
VAPA-202ENST00000400000 RSPH14Q9UHP6 348 aa15.56■□□□□ 0.08
VAPA-202ENST00000400000 PLEKHH1Q9ULM0 1364 aa15.56■□□□□ 0.08
VAPA-202ENST00000400000 MTHFSDQ2M296 383 aaKnown RBP15.56■□□□□ 0.08
VAPA-202ENST00000400000 SPECC1LQ69YQ0 1117 aa15.56■□□□□ 0.08
VAPA-202ENST00000400000 RABEP2Q9H5N1 569 aa15.56■□□□□ 0.08
VAPA-202ENST00000400000 RTL1A6NKG5 1358 aa15.56■□□□□ 0.08
VAPA-202ENST00000400000 TTC21BQ7Z4L5 1316 aa15.55■□□□□ 0.08
VAPA-202ENST00000400000 CCNT1O60563 726 aaKnown RBP15.55■□□□□ 0.08
VAPA-202ENST00000400000 PPP1R7Q15435 360 aa15.55■□□□□ 0.08
VAPA-202ENST00000400000 LONRF3Q496Y0 759 aa15.55■□□□□ 0.08
VAPA-202ENST00000400000 GABPAQ06546 454 aa15.55■□□□□ 0.08
VAPA-202ENST00000400000 IFI16Q16666 785 aaKnown RBP15.55■□□□□ 0.08
VAPA-202ENST00000400000 ARMT1Q9H993 441 aa15.55■□□□□ 0.08
VAPA-202ENST00000400000 AGTPBP1Q9UPW5 1226 aa15.55■□□□□ 0.08
VAPA-202ENST00000400000 SKILP12757 684 aa15.55■□□□□ 0.08
VAPA-202ENST00000400000 RBM17Q96I25 401 aaKnown RBP15.55■□□□□ 0.08
VAPA-202ENST00000400000 TNRQ92752 1358 aa15.55■□□□□ 0.08
VAPA-202ENST00000400000 LRRC27Q9C0I9 530 aa15.55■□□□□ 0.08
VAPA-202ENST00000400000 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.55■□□□□ 0.08
VAPA-202ENST00000400000 ZEB2O60315 1214 aa15.55■□□□□ 0.08
VAPA-202ENST00000400000 KRT79Q5XKE5 535 aa15.55■□□□□ 0.08
VAPA-202ENST00000400000 BEGAINQ9BUH8 593 aa15.55■□□□□ 0.08
VAPA-202ENST00000400000 GPR162Q16538 588 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 C6orf163Q5TEZ5 329 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 CYLC1P35663 651 aaPredicted RBP15.54■□□□□ 0.08
VAPA-202ENST00000400000 TPD52P55327 224 aaPredicted RBP15.54■□□□□ 0.08
VAPA-202ENST00000400000 NPHP3Q7Z494 1330 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 IGSF3O75054 1194 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 MBD4O95243 580 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 PSMA7O14818 248 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 PRDM1O75626 825 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 TSPYL6Q8N831 410 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 NEK11Q8NG66 645 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 HMG20BQ9P0W2 317 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 FAM169AQ9Y6X4 670 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 CCDC172P0C7W6 258 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 PDE1AP54750 535 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 ESYT1Q9BSJ8 1104 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 CNNM2Q9H8M5 875 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 PFDN4Q9NQP4 134 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 STK32BQ9NY57 414 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 TIAM1Q13009 1591 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 PTPN23Q9H3S7 1636 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 B4E1Z4 1266 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 ZWINTO95229 277 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 CNBD1Q8NA66 436 aa15.54■□□□□ 0.08
VAPA-202ENST00000400000 TTC12Q9H892 705 aaPredicted RBP15.54■□□□□ 0.08
VAPA-202ENST00000400000 TXNDC16Q9P2K2 825 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms