RNA–Protein interactions for RNA: ENST00000397961.6

PFKL-202, Transcript of phosphofructokinase, liver type, humanhuman

TSL 1 (best)

Gene PFKL, Length 3,390 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKL-202ENST00000397961 H7C1W4 665 aa17.29■□□□□ 0.36
PFKL-202ENST00000397961 MCAMP43121 646 aa17.29■□□□□ 0.36
PFKL-202ENST00000397961 RESTQ13127 1097 aa17.29■□□□□ 0.36
PFKL-202ENST00000397961 CCDC144BQ3MJ40 725 aa17.29■□□□□ 0.36
PFKL-202ENST00000397961 PCDH11XQ9BZA7 1347 aa17.29■□□□□ 0.36
PFKL-202ENST00000397961 PCDH11YQ9BZA8 1340 aa17.29■□□□□ 0.36
PFKL-202ENST00000397961 ZMYND15Q9H091 742 aa17.28■□□□□ 0.36
PFKL-202ENST00000397961 KCNJ14Q9UNX9 436 aa17.28■□□□□ 0.36
PFKL-202ENST00000397961 USP42Q9H9J4 1324 aaKnown RBP17.28■□□□□ 0.36
PFKL-202ENST00000397961 MED23Q9ULK4 1368 aa17.28■□□□□ 0.36
PFKL-202ENST00000397961 SLIT1O75093 1534 aa17.28■□□□□ 0.36
PFKL-202ENST00000397961 NDUFA8P51970 172 aa17.28■□□□□ 0.36
PFKL-202ENST00000397961 TCIRG1Q13488 830 aa17.28■□□□□ 0.36
PFKL-202ENST00000397961 HEG1Q9ULI3 1381 aa17.28■□□□□ 0.36
PFKL-202ENST00000397961 ANKRD18BA2A2Z9 1011 aa17.28■□□□□ 0.36
PFKL-202ENST00000397961 RIOK3O14730 519 aaKnown RBP17.28■□□□□ 0.36
PFKL-202ENST00000397961 VPS37DQ86XT2 251 aa17.28■□□□□ 0.36
PFKL-202ENST00000397961 DZIP3Q86Y13 1208 aaKnown RBP17.28■□□□□ 0.36
PFKL-202ENST00000397961 CCDC191Q8NCU4 936 aa17.28■□□□□ 0.36
PFKL-202ENST00000397961 ZNF532Q9HCE3 1301 aa17.27■□□□□ 0.36
PFKL-202ENST00000397961 LRP10Q7Z4F1 713 aa17.27■□□□□ 0.36
PFKL-202ENST00000397961 IFIT3O14879 490 aaKnown RBP17.27■□□□□ 0.35
PFKL-202ENST00000397961 BCAMP50895 628 aa17.27■□□□□ 0.35
PFKL-202ENST00000397961 ZMYM1Q5SVZ6 1142 aa17.27■□□□□ 0.35
PFKL-202ENST00000397961 PCDHA7Q9UN72 937 aa17.27■□□□□ 0.35
PFKL-202ENST00000397961 XRN1Q8IZH2 1706 aaKnown RBP17.26■□□□□ 0.35
PFKL-202ENST00000397961 TNNT1P13805 278 aa17.26■□□□□ 0.35
PFKL-202ENST00000397961 SDR42E1Q8WUS8 393 aa17.26■□□□□ 0.35
PFKL-202ENST00000397961 NAPBQ9H115 298 aa17.26■□□□□ 0.35
PFKL-202ENST00000397961 CLSTN2Q9H4D0 955 aa17.26■□□□□ 0.35
PFKL-202ENST00000397961 KIF3AQ9Y496 699 aa17.26■□□□□ 0.35
PFKL-202ENST00000397961 MBD4O95243 580 aa17.26■□□□□ 0.35
PFKL-202ENST00000397961 MCM5P33992 734 aa17.26■□□□□ 0.35
PFKL-202ENST00000397961 CACTINQ8WUQ7 758 aaKnown RBP17.26■□□□□ 0.35
PFKL-202ENST00000397961 ALG1Q9BT22 464 aa17.26■□□□□ 0.35
PFKL-202ENST00000397961 PIH1D3Q9NQM4 214 aaKnown RBP17.26■□□□□ 0.35
PFKL-202ENST00000397961 DDX19AQ9NUU7 478 aaKnown RBP17.26■□□□□ 0.35
PFKL-202ENST00000397961 RAI14Q9P0K7 980 aa17.26■□□□□ 0.35
PFKL-202ENST00000397961 FAM208AQ9UK61 1670 aaKnown RBP17.26■□□□□ 0.35
PFKL-202ENST00000397961 CYP2D7A0A087X1C5 515 aa17.26■□□□□ 0.35
PFKL-202ENST00000397961 METAP2P50579 478 aaKnown RBP eCLIP17.26■□□□□ 0.359e-7■■□□□ 12.2
PFKL-202ENST00000397961 TMEM67Q5HYA8 995 aa17.26■□□□□ 0.35
PFKL-202ENST00000397961 SPATA31A3Q5VYP0 1347 aa17.26■□□□□ 0.35
PFKL-202ENST00000397961 ZNF827Q17R98 1081 aa17.25■□□□□ 0.35
PFKL-202ENST00000397961 KLHL10Q6JEL2 608 aa17.25■□□□□ 0.35
PFKL-202ENST00000397961 NCOA7Q8NI08 942 aa17.25■□□□□ 0.35
PFKL-202ENST00000397961 STAMQ92783 540 aa17.25■□□□□ 0.35
PFKL-202ENST00000397961 USP27XA6NNY8 438 aa17.25■□□□□ 0.35
PFKL-202ENST00000397961 DPCR1Q3MIW9 517 aa17.25■□□□□ 0.35
PFKL-202ENST00000397961 ZNF396Q96N95 335 aaPredicted RBP17.25■□□□□ 0.35
PFKL-202ENST00000397961 TOPAZ1Q8N9V7 1692 aa17.25■□□□□ 0.35
PFKL-202ENST00000397961 CASP7P55210 303 aa17.25■□□□□ 0.35
PFKL-202ENST00000397961 RABL6Q3YEC7 729 aaPredicted RBP17.25■□□□□ 0.35
PFKL-202ENST00000397961 TMC6Q7Z403 805 aa17.25■□□□□ 0.35
PFKL-202ENST00000397961 NFAT5O94916 1531 aa17.24■□□□□ 0.35
PFKL-202ENST00000397961 PXDNLA1KZ92 1463 aa17.24■□□□□ 0.35
PFKL-202ENST00000397961 KIF28PB7ZC32 967 aa17.24■□□□□ 0.35
PFKL-202ENST00000397961 PPP4R3BQ5MIZ7 849 aa17.24■□□□□ 0.35
PFKL-202ENST00000397961 ZHX1Q9UKY1 873 aaPredicted RBP17.24■□□□□ 0.35
PFKL-202ENST00000397961 TULP1O00294 542 aaPredicted RBP17.24■□□□□ 0.35
PFKL-202ENST00000397961 TMEM87AQ8NBN3 555 aa17.24■□□□□ 0.35
PFKL-202ENST00000397961 WDR17Q8IZU2 1322 aa17.23■□□□□ 0.35
PFKL-202ENST00000397961 PFKFB2O60825 505 aa17.23■□□□□ 0.35
PFKL-202ENST00000397961 FDPSP14324 419 aaKnown RBP17.23■□□□□ 0.35
PFKL-202ENST00000397961 ATP6V1AP38606 617 aa17.23■□□□□ 0.35
PFKL-202ENST00000397961 TRIM29Q14134 588 aa17.23■□□□□ 0.35
PFKL-202ENST00000397961 TBC1D10CQ8IV04 446 aa17.23■□□□□ 0.35
PFKL-202ENST00000397961 GOLGA8AA7E2F4 631 aa17.23■□□□□ 0.35
PFKL-202ENST00000397961 ZNF75DP51815 510 aa17.23■□□□□ 0.35
PFKL-202ENST00000397961 UVSSAQ2YD98 709 aa17.23■□□□□ 0.35
PFKL-202ENST00000397961 CCDC102BQ68D86 513 aa17.23■□□□□ 0.35
PFKL-202ENST00000397961 HOMER1Q86YM7 354 aa17.23■□□□□ 0.35
PFKL-202ENST00000397961 AKAP2Q9Y2D5 859 aa17.23■□□□□ 0.35
PFKL-202ENST00000397961 UTYO14607 1347 aa17.23■□□□□ 0.35
PFKL-202ENST00000397961 EXOC5O00471 708 aa17.23■□□□□ 0.35
PFKL-202ENST00000397961 SKILP12757 684 aa17.23■□□□□ 0.35
PFKL-202ENST00000397961 HS1BP3Q53T59 392 aa17.23■□□□□ 0.35
PFKL-202ENST00000397961 CYB5R4Q7L1T6 521 aa17.23■□□□□ 0.35
PFKL-202ENST00000397961 GRAMD1CQ8IYS0 662 aa17.23■□□□□ 0.35
PFKL-202ENST00000397961 CCAR2Q8N163 923 aaKnown RBP17.23■□□□□ 0.35
PFKL-202ENST00000397961 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.23■□□□□ 0.352e-7■■■■■ 27.7
PFKL-202ENST00000397961 ATG3Q9NT62 314 aa17.23■□□□□ 0.35
PFKL-202ENST00000397961 IFNKQ9P0W0 207 aa17.23■□□□□ 0.35
PFKL-202ENST00000397961 NALCNQ8IZF0 1738 aa17.23■□□□□ 0.35
PFKL-202ENST00000397961 FUCA2Q9BTY2 467 aa17.22■□□□□ 0.35
PFKL-202ENST00000397961 RANBP6O60518 1105 aaKnown RBP17.22■□□□□ 0.35
PFKL-202ENST00000397961 U2AF2P26368 475 aaKnown RBP eCLIP17.22■□□□□ 0.35
PFKL-202ENST00000397961 HELLSQ9NRZ9 838 aa17.22■□□□□ 0.35
PFKL-202ENST00000397961 NIP7Q9Y221 180 aaKnown RBP eCLIP17.22■□□□□ 0.353e-6■■■■■ 33.7
PFKL-202ENST00000397961 CCDC69A6NI79 296 aa17.22■□□□□ 0.35
PFKL-202ENST00000397961 SPTLC2O15270 562 aa17.22■□□□□ 0.35
PFKL-202ENST00000397961 HMGN5P82970 282 aaKnown RBP17.22■□□□□ 0.35
PFKL-202ENST00000397961 TTLL11Q8NHH1 800 aa17.22■□□□□ 0.35
PFKL-202ENST00000397961 CARMIL3Q8ND23 1372 aa17.21■□□□□ 0.35
PFKL-202ENST00000397961 SERPINC1P01008 464 aa17.21■□□□□ 0.35
PFKL-202ENST00000397961 GYG1P46976 350 aa17.21■□□□□ 0.35
PFKL-202ENST00000397961 CEP57L1Q8IYX8 460 aa17.21■□□□□ 0.35
PFKL-202ENST00000397961 MRPS27Q92552 414 aaKnown RBP17.21■□□□□ 0.35
PFKL-202ENST00000397961 CTNNA3Q9UI47 895 aa17.21■□□□□ 0.35
PFKL-202ENST00000397961 PES1O00541 588 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms