RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 PARP3Q9Y6F1 533 aa13.32□□□□□ -0.28
PUM3-202ENST00000397885 CHL1O00533 1208 aa13.31□□□□□ -0.28
PUM3-202ENST00000397885 SGSM2O43147 1006 aa13.31□□□□□ -0.28
PUM3-202ENST00000397885 E2F4Q16254 413 aa13.31□□□□□ -0.28
PUM3-202ENST00000397885 LONRF2Q1L5Z9 754 aa13.31□□□□□ -0.28
PUM3-202ENST00000397885 NBPF11Q86T75 865 aa13.31□□□□□ -0.28
PUM3-202ENST00000397885 DHX40Q8IX18 779 aaKnown RBP13.31□□□□□ -0.28
PUM3-202ENST00000397885 DNAAF4Q8WXU2 420 aa13.31□□□□□ -0.28
PUM3-202ENST00000397885 CDCA7Q9BWT1 371 aaPredicted RBP13.31□□□□□ -0.28
PUM3-202ENST00000397885 A1CFQ9NQ94 594 aaKnown RBP13.31□□□□□ -0.28
PUM3-202ENST00000397885 CHMP3Q9Y3E7 222 aa13.31□□□□□ -0.28
PUM3-202ENST00000397885 PPFIA4O75335 1185 aa13.31□□□□□ -0.28
PUM3-202ENST00000397885 URI1O94763 535 aaPredicted RBP13.31□□□□□ -0.28
PUM3-202ENST00000397885 CSB-PGBD3P0DP91 1061 aa13.31□□□□□ -0.28
PUM3-202ENST00000397885 MAP3K9P80192 1104 aa13.31□□□□□ -0.28
PUM3-202ENST00000397885 FAM182BQ5T319 152 aa13.31□□□□□ -0.28
PUM3-202ENST00000397885 HDXQ7Z353 690 aa13.31□□□□□ -0.28
PUM3-202ENST00000397885 PARD6BQ9BYG5 372 aa13.31□□□□□ -0.28
PUM3-202ENST00000397885 RBM28Q9NW13 759 aaKnown RBP13.31□□□□□ -0.28
PUM3-202ENST00000397885 LTN1O94822 1766 aa13.31□□□□□ -0.28
PUM3-202ENST00000397885 WNK3Q9BYP7 1800 aa13.31□□□□□ -0.28
PUM3-202ENST00000397885 GOLGA6L9A6NEM1 432 aa13.3□□□□□ -0.28
PUM3-202ENST00000397885 POTEB2H3BUK9 544 aa13.3□□□□□ -0.28
PUM3-202ENST00000397885 DNAJC21Q5F1R6 531 aaKnown RBP13.3□□□□□ -0.28
PUM3-202ENST00000397885 EP400NLQ6ZTU2 488 aa13.3□□□□□ -0.28
PUM3-202ENST00000397885 C11orf57Q6ZUT1 292 aaPredicted RBP13.3□□□□□ -0.28
PUM3-202ENST00000397885 BICD2Q8TD16 824 aa13.3□□□□□ -0.28
PUM3-202ENST00000397885 STAG1Q8WVM7 1258 aa13.3□□□□□ -0.28
PUM3-202ENST00000397885 MEIS3Q99687 375 aa13.3□□□□□ -0.28
PUM3-202ENST00000397885 LSG1Q9H089 658 aaKnown RBP13.3□□□□□ -0.28
PUM3-202ENST00000397885 VPS18Q9P253 973 aa13.3□□□□□ -0.28
PUM3-202ENST00000397885 CCDC189A1A4V9 331 aa13.3□□□□□ -0.28
PUM3-202ENST00000397885 GORABQ5T7V8 394 aa13.3□□□□□ -0.28
PUM3-202ENST00000397885 SULT6B1Q6IMI4 303 aa13.3□□□□□ -0.28
PUM3-202ENST00000397885 ARMCX5Q6P1M9 558 aa13.3□□□□□ -0.28
PUM3-202ENST00000397885 CEP57L1Q8IYX8 460 aa13.3□□□□□ -0.28
PUM3-202ENST00000397885 PDRG1Q9NUG6 133 aa13.3□□□□□ -0.28
PUM3-202ENST00000397885 OVOS2A0A0J9YW53 1432 aa13.3□□□□□ -0.28
PUM3-202ENST00000397885 OVOS2Q6IE36 1432 aa13.3□□□□□ -0.28
PUM3-202ENST00000397885 TNS1Q9HBL0 1735 aaKnown RBP13.29□□□□□ -0.28
PUM3-202ENST00000397885 PPP1R12AO14974 1030 aaPredicted RBP13.29□□□□□ -0.28
PUM3-202ENST00000397885 ZSCAN12O43309 604 aa13.29□□□□□ -0.28
PUM3-202ENST00000397885 TXLNAP40222 546 aa13.29□□□□□ -0.28
PUM3-202ENST00000397885 USP5P45974 858 aa13.29□□□□□ -0.28
PUM3-202ENST00000397885 GOLGA1Q92805 767 aa13.29□□□□□ -0.28
PUM3-202ENST00000397885 KCNB2Q92953 911 aa13.29□□□□□ -0.28
PUM3-202ENST00000397885 BPIFA3Q9BQP9 254 aa13.29□□□□□ -0.28
PUM3-202ENST00000397885 ZSWIM6Q9HCJ5 1215 aa13.29□□□□□ -0.28
PUM3-202ENST00000397885 KIF3CO14782 793 aa13.29□□□□□ -0.28
PUM3-202ENST00000397885 C21orf2O43822 256 aa13.29□□□□□ -0.28
PUM3-202ENST00000397885 LARGE1O95461 756 aa13.29□□□□□ -0.28
PUM3-202ENST00000397885 EIF4A2Q14240 407 aaKnown RBP13.29□□□□□ -0.28
PUM3-202ENST00000397885 SAMD1Q6SPF0 538 aaPredicted RBP13.29□□□□□ -0.28
PUM3-202ENST00000397885 FAM71BQ8TC56 605 aa13.29□□□□□ -0.28
PUM3-202ENST00000397885 DISP2A7MBM2 1401 aa13.29□□□□□ -0.28
PUM3-202ENST00000397885 CCT4P50991 539 aaKnown RBP13.28□□□□□ -0.28
PUM3-202ENST00000397885 LRRC31Q6UY01 552 aa13.28□□□□□ -0.28
PUM3-202ENST00000397885 CDC37L1Q7L3B6 337 aa13.28□□□□□ -0.28
PUM3-202ENST00000397885 PGBD1Q96JS3 809 aa13.28□□□□□ -0.28
PUM3-202ENST00000397885 PATL2C9JE40 543 aaKnown RBP13.28□□□□□ -0.28
PUM3-202ENST00000397885 DDB1Q16531 1140 aa13.28□□□□□ -0.28
PUM3-202ENST00000397885 RASEFQ8IZ41 740 aa13.28□□□□□ -0.28
PUM3-202ENST00000397885 CFAP45Q9UL16 551 aa13.28□□□□□ -0.28
PUM3-202ENST00000397885 MRFAP1Q9Y605 127 aa13.28□□□□□ -0.28
PUM3-202ENST00000397885 CYP46A1Q9Y6A2 500 aa13.28□□□□□ -0.28
PUM3-202ENST00000397885 LRRC37A3O60309 1634 aa13.27□□□□□ -0.28
PUM3-202ENST00000397885 ERLIN1O75477 346 aa13.27□□□□□ -0.28
PUM3-202ENST00000397885 TRIM37O94972 964 aa13.27□□□□□ -0.28
PUM3-202ENST00000397885 TUBBP07437 444 aa13.27□□□□□ -0.28
PUM3-202ENST00000397885 PPP2R3AQ06190 1150 aa13.27□□□□□ -0.28
PUM3-202ENST00000397885 FOXR1Q6PIV2 292 aa13.27□□□□□ -0.28
PUM3-202ENST00000397885 HSP90B1P14625 803 aaKnown RBP13.27□□□□□ -0.29
PUM3-202ENST00000397885 ST3GAL1Q11201 340 aa13.27□□□□□ -0.29
PUM3-202ENST00000397885 CCDC30Q5VVM6 783 aa13.27□□□□□ -0.29
PUM3-202ENST00000397885 MCM10Q7L590 875 aa13.27□□□□□ -0.29
PUM3-202ENST00000397885 ACBD3Q9H3P7 528 aa13.27□□□□□ -0.29
PUM3-202ENST00000397885 PDE11AQ9HCR9 933 aa13.27□□□□□ -0.29
PUM3-202ENST00000397885 RAB21Q9UL25 225 aa13.27□□□□□ -0.29
PUM3-202ENST00000397885 ERLIN2O94905 339 aa13.26□□□□□ -0.29
PUM3-202ENST00000397885 GNAI2P04899 355 aa13.26□□□□□ -0.29
PUM3-202ENST00000397885 SLC4A2P04920 1241 aa13.26□□□□□ -0.29
PUM3-202ENST00000397885 EN1Q05925 392 aaPredicted RBP13.26□□□□□ -0.29
PUM3-202ENST00000397885 ME3Q16798 604 aa13.26□□□□□ -0.29
PUM3-202ENST00000397885 BEND6Q5SZJ8 279 aaPredicted RBP13.26□□□□□ -0.29
PUM3-202ENST00000397885 IL25Q9H293 177 aa13.26□□□□□ -0.29
PUM3-202ENST00000397885 KRT24Q2M2I5 525 aa13.25□□□□□ -0.29
PUM3-202ENST00000397885 MICALL1Q8N3F8 863 aa13.25□□□□□ -0.29
PUM3-202ENST00000397885 TBC1D22AQ8WUA7 517 aa13.25□□□□□ -0.29
PUM3-202ENST00000397885 AKAP2Q9Y2D5 859 aa13.25□□□□□ -0.29
PUM3-202ENST00000397885 OVOS2A0A0G2JMS6 1433 aa13.25□□□□□ -0.29
PUM3-202ENST00000397885 PEAK1Q9H792 1746 aa13.25□□□□□ -0.29
PUM3-202ENST00000397885 APBA3O96018 575 aa13.25□□□□□ -0.29
PUM3-202ENST00000397885 MNAT1P51948 309 aa13.25□□□□□ -0.29
PUM3-202ENST00000397885 GNL2Q13823 731 aaKnown RBP13.25□□□□□ -0.29
PUM3-202ENST00000397885 HSP90B2PQ58FF3 399 aa13.25□□□□□ -0.29
PUM3-202ENST00000397885 TSHZ3Q63HK5 1081 aa13.25□□□□□ -0.29
PUM3-202ENST00000397885 TMC6Q7Z403 805 aa13.25□□□□□ -0.29
PUM3-202ENST00000397885 IP6K1Q92551 441 aa13.25□□□□□ -0.29
PUM3-202ENST00000397885 ALDH8A1Q9H2A2 487 aaPredicted RBP13.25□□□□□ -0.29
PUM3-202ENST00000397885 ADCY9O60503 1353 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms