RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 MPRIPQ6WCQ1 1025 aa16.96■□□□□ 0.31
CHL1-202ENST00000397491 TSGA10Q9BZW7 698 aa16.96■□□□□ 0.31
CHL1-202ENST00000397491 ZNF287Q9HBT7 754 aa16.96■□□□□ 0.31
CHL1-202ENST00000397491 POLR3AO14802 1390 aaPredicted RBP16.96■□□□□ 0.31
CHL1-202ENST00000397491 MAGI1Q96QZ7 1491 aaPredicted RBP16.96■□□□□ 0.31
CHL1-202ENST00000397491 WTAPQ15007 396 aa16.96■□□□□ 0.31
CHL1-202ENST00000397491 LRCH2Q5VUJ6 765 aa16.96■□□□□ 0.31
CHL1-202ENST00000397491 TRIM7Q9C029 511 aa16.96■□□□□ 0.31
CHL1-202ENST00000397491 RPAINQ86UA6 219 aa16.96■□□□□ 0.31
CHL1-202ENST00000397491 NBPF7P0C2Y1 421 aaPredicted RBP16.95■□□□□ 0.3
CHL1-202ENST00000397491 ZC3H6P61129 1189 aaKnown RBP16.95■□□□□ 0.3
CHL1-202ENST00000397491 ASIC1P78348 528 aa16.95■□□□□ 0.3
CHL1-202ENST00000397491 MICAL1Q8TDZ2 1067 aa16.95■□□□□ 0.3
CHL1-202ENST00000397491 SWAP70Q9UH65 585 aa16.95■□□□□ 0.3
CHL1-202ENST00000397491 RRP15Q9Y3B9 282 aaKnown RBP16.95■□□□□ 0.3
CHL1-202ENST00000397491 CCDC25Q86WR0 208 aa16.95■□□□□ 0.3
CHL1-202ENST00000397491 SEC62Q99442 399 aaKnown RBP16.95■□□□□ 0.3
CHL1-202ENST00000397491 RTN1Q16799 776 aa16.95■□□□□ 0.3
CHL1-202ENST00000397491 SND1Q7KZF4 910 aaKnown RBP eCLIP16.95■□□□□ 0.3
CHL1-202ENST00000397491 UBE3BQ7Z3V4 1068 aa16.95■□□□□ 0.3
CHL1-202ENST00000397491 STMN2Q93045 179 aa16.95■□□□□ 0.3
CHL1-202ENST00000397491 ZFYP08048 801 aaPredicted RBP16.95■□□□□ 0.3
CHL1-202ENST00000397491 CCDC172P0C7W6 258 aa16.95■□□□□ 0.3
CHL1-202ENST00000397491 CEP85LQ5SZL2 805 aa16.95■□□□□ 0.3
CHL1-202ENST00000397491 FBXO31Q5XUX0 539 aaPredicted RBP16.95■□□□□ 0.3
CHL1-202ENST00000397491 CYP26C1Q6V0L0 522 aa16.95■□□□□ 0.3
CHL1-202ENST00000397491 ANKRD18BA2A2Z9 1011 aa16.94■□□□□ 0.3
CHL1-202ENST00000397491 FBLN1P23142 703 aa16.94■□□□□ 0.3
CHL1-202ENST00000397491 DHX32Q7L7V1 743 aaKnown RBP16.94■□□□□ 0.3
CHL1-202ENST00000397491 MTRF1LQ9UGC7 380 aaKnown RBP16.94■□□□□ 0.3
CHL1-202ENST00000397491 SNX14Q9Y5W7 946 aa16.94■□□□□ 0.3
CHL1-202ENST00000397491 IQGAP2Q13576 1575 aa16.94■□□□□ 0.3
CHL1-202ENST00000397491 EFCAB8A8MWE9 144 aa16.94■□□□□ 0.3
CHL1-202ENST00000397491 PRPHP41219 470 aa16.94■□□□□ 0.3
CHL1-202ENST00000397491 CEBPAP49715 358 aaPredicted RBP16.94■□□□□ 0.3
CHL1-202ENST00000397491 XPO4Q9C0E2 1151 aaKnown RBP16.94■□□□□ 0.3
CHL1-202ENST00000397491 LRRC27Q9C0I9 530 aa16.94■□□□□ 0.3
CHL1-202ENST00000397491 POGZQ7Z3K3 1410 aa16.94■□□□□ 0.3
CHL1-202ENST00000397491 TTF1Q15361 905 aaPredicted RBP16.94■□□□□ 0.3
CHL1-202ENST00000397491 E7EVH7 732 aa16.94■□□□□ 0.3
CHL1-202ENST00000397491 MTX1Q13505 466 aa16.93■□□□□ 0.3
CHL1-202ENST00000397491 ZNF444Q8N0Y2 327 aaPredicted RBP16.93■□□□□ 0.3
CHL1-202ENST00000397491 KRI1Q8N9T8 703 aaKnown RBP16.93■□□□□ 0.3
CHL1-202ENST00000397491 JARID2Q92833 1246 aaPredicted RBP16.93■□□□□ 0.3
CHL1-202ENST00000397491 NAP1L3Q99457 506 aaPredicted RBP16.93■□□□□ 0.3
CHL1-202ENST00000397491 VPS16Q9H269 839 aa16.93■□□□□ 0.3
CHL1-202ENST00000397491 GNGT1P63211 74 aa16.93■□□□□ 0.3
CHL1-202ENST00000397491 LONRF3Q496Y0 759 aa16.93■□□□□ 0.3
CHL1-202ENST00000397491 LRRC8AQ8IWT6 810 aa16.93■□□□□ 0.3
CHL1-202ENST00000397491 CACNA2D3Q8IZS8 1091 aa16.93■□□□□ 0.3
CHL1-202ENST00000397491 MIPOL1Q8TD10 442 aa16.93■□□□□ 0.3
CHL1-202ENST00000397491 TBC1D5Q92609 795 aa16.93■□□□□ 0.3
CHL1-202ENST00000397491 LAMC3Q9Y6N6 1575 aa16.93■□□□□ 0.3
CHL1-202ENST00000397491 IFT20Q8IY31 132 aa16.93■□□□□ 0.3
CHL1-202ENST00000397491 PA2G4Q9UQ80 394 aaKnown RBP16.93■□□□□ 0.3
CHL1-202ENST00000397491 CDC37L1Q7L3B6 337 aa16.93■□□□□ 0.3
CHL1-202ENST00000397491 PHF23Q9BUL5 403 aaPredicted RBP16.93■□□□□ 0.3
CHL1-202ENST00000397491 HGSO14964 777 aaPredicted RBP16.92■□□□□ 0.3
CHL1-202ENST00000397491 GBP1P32455 592 aa16.92■□□□□ 0.3
CHL1-202ENST00000397491 CHAMP1Q96JM3 812 aa16.92■□□□□ 0.3
CHL1-202ENST00000397491 ATP5J2-PTCD1G3V325 749 aa16.92■□□□□ 0.3
CHL1-202ENST00000397491 PTCD1O75127 700 aaKnown RBP16.92■□□□□ 0.3
CHL1-202ENST00000397491 NLRP12P59046 1061 aa16.92■□□□□ 0.3
CHL1-202ENST00000397491 ETF1P62495 437 aaKnown RBP16.92■□□□□ 0.3
CHL1-202ENST00000397491 IDI1Q13907 227 aa16.92■□□□□ 0.3
CHL1-202ENST00000397491 TSNAXIP1Q2TAA8 658 aa16.92■□□□□ 0.3
CHL1-202ENST00000397491 BCAS4Q8TDM0 211 aa16.92■□□□□ 0.3
CHL1-202ENST00000397491 JAKMIP2Q96AA8 810 aa16.92■□□□□ 0.3
CHL1-202ENST00000397491 BICDL2A1A5D9 508 aa16.91■□□□□ 0.3
CHL1-202ENST00000397491 RPS6KB1P23443 525 aa16.91■□□□□ 0.3
CHL1-202ENST00000397491 RNASE9P60153 205 aaKnown RBP16.91■□□□□ 0.3
CHL1-202ENST00000397491 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.91■□□□□ 0.3
CHL1-202ENST00000397491 GRIN2AQ12879 1464 aa16.91■□□□□ 0.3
CHL1-202ENST00000397491 ZNF608Q9ULD9 1512 aaPredicted RBP16.91■□□□□ 0.3
CHL1-202ENST00000397491 MPHOSPH10O00566 681 aaKnown RBP16.91■□□□□ 0.3
CHL1-202ENST00000397491 SLC5A1P13866 664 aa16.91■□□□□ 0.3
CHL1-202ENST00000397491 ALDH3A1P30838 453 aa16.91■□□□□ 0.3
CHL1-202ENST00000397491 SF3A3Q12874 501 aaKnown RBP eCLIP16.91■□□□□ 0.3
CHL1-202ENST00000397491 CAVIN4Q5BKX8 364 aa16.91■□□□□ 0.3
CHL1-202ENST00000397491 ZSCAN29Q8IWY8 852 aaPredicted RBP16.91■□□□□ 0.3
CHL1-202ENST00000397491 NKIRAS1Q9NYS0 192 aa16.91■□□□□ 0.3
CHL1-202ENST00000397491 ZRANB1Q9UGI0 708 aa16.91■□□□□ 0.3
CHL1-202ENST00000397491 PEX19P40855 299 aa16.91■□□□□ 0.3
CHL1-202ENST00000397491 AP1ARQ63HQ0 302 aa16.91■□□□□ 0.3
CHL1-202ENST00000397491 KIAA1524Q8TCG1 905 aa16.91■□□□□ 0.3
CHL1-202ENST00000397491 PIK3C2GO75747 1445 aa16.91■□□□□ 0.3
CHL1-202ENST00000397491 GIGYF1O75420 1035 aaPredicted RBP16.91■□□□□ 0.3
CHL1-202ENST00000397491 TRIM14Q14142 442 aa16.91■□□□□ 0.3
CHL1-202ENST00000397491 VAT1LQ9HCJ6 419 aa16.91■□□□□ 0.3
CHL1-202ENST00000397491 PDE11AQ9HCR9 933 aa16.91■□□□□ 0.3
CHL1-202ENST00000397491 PER1O15534 1290 aaPredicted RBP16.9■□□□□ 0.3
CHL1-202ENST00000397491 ACTN2P35609 894 aa16.9■□□□□ 0.3
CHL1-202ENST00000397491 ANTXR1Q9H6X2 564 aa16.9■□□□□ 0.3
CHL1-202ENST00000397491 SOS1Q07889 1333 aaPredicted RBP16.9■□□□□ 0.3
CHL1-202ENST00000397491 RUFY4Q6ZNE9 571 aa16.9■□□□□ 0.3
CHL1-202ENST00000397491 TMTC1Q8IUR5 882 aa16.9■□□□□ 0.3
CHL1-202ENST00000397491 CCDC26Q8TAB7 109 aa16.9■□□□□ 0.3
CHL1-202ENST00000397491 KRT23Q9C075 422 aa16.9■□□□□ 0.3
CHL1-202ENST00000397491 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.9■□□□□ 0.3
CHL1-202ENST00000397491 CTNND2Q9UQB3 1225 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms