RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 PRM3Q9NNZ6 103 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 SNRKQ9NRH2 765 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 PIM2Q9P1W9 311 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 CGNQ9P2M7 1197 aaKnown RBP4.36□□□□□ -1.71
XRCC4-203ENST00000396027 NAGPAQ9UK23 515 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 IQSEC3Q9UPP2 1182 aaPredicted RBP4.36□□□□□ -1.71
XRCC4-203ENST00000396027 PAXBP1Q9Y5B6 917 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 V9GYY5 206 aaPredicted RBP4.36□□□□□ -1.71
XRCC4-203ENST00000396027 ABCC9O60706 1549 aa4.35□□□□□ -1.71
XRCC4-203ENST00000396027 SMARCA2P51531 1590 aa4.35□□□□□ -1.71
XRCC4-203ENST00000396027 TNIKQ9UKE5 1360 aa4.35□□□□□ -1.71
XRCC4-203ENST00000396027 TPM3P06753 285 aa4.35□□□□□ -1.71
XRCC4-203ENST00000396027 HSP90AB1P08238 724 aaKnown RBP4.35□□□□□ -1.71
XRCC4-203ENST00000396027 KCNJ4P48050 445 aa4.35□□□□□ -1.71
XRCC4-203ENST00000396027 PDE3BQ13370 1112 aa4.35□□□□□ -1.71
XRCC4-203ENST00000396027 TMED1Q13445 227 aa4.35□□□□□ -1.71
XRCC4-203ENST00000396027 MTFR1Q15390 333 aa4.35□□□□□ -1.71
XRCC4-203ENST00000396027 CCDC27Q2M243 656 aa4.35□□□□□ -1.71
XRCC4-203ENST00000396027 RINLQ6ZS11 566 aa4.35□□□□□ -1.71
XRCC4-203ENST00000396027 ANKRD23Q86SG2 305 aa4.35□□□□□ -1.71
XRCC4-203ENST00000396027 ARMC10Q8N2F6 343 aa4.35□□□□□ -1.71
XRCC4-203ENST00000396027 LSM14AQ8ND56 463 aaKnown RBP4.35□□□□□ -1.71
XRCC4-203ENST00000396027 ZNF526Q8TF50 670 aaPredicted RBP4.35□□□□□ -1.71
XRCC4-203ENST00000396027 SYAP1Q96A49 352 aaPredicted RBP4.35□□□□□ -1.71
XRCC4-203ENST00000396027 CCDC85AQ96PX6 553 aaPredicted RBP4.35□□□□□ -1.71
XRCC4-203ENST00000396027 UBL7Q96S82 380 aaPredicted RBP4.35□□□□□ -1.71
XRCC4-203ENST00000396027 RASSF4Q9H2L5 321 aa4.35□□□□□ -1.71
XRCC4-203ENST00000396027 CEP164Q9UPV0 1460 aa4.34□□□□□ -1.71
XRCC4-203ENST00000396027 DHX29Q7Z478 1369 aaKnown RBP4.34□□□□□ -1.71
XRCC4-203ENST00000396027 HMX2A2RU54 273 aa4.34□□□□□ -1.71
XRCC4-203ENST00000396027 KLHL33A6NCF5 533 aa4.34□□□□□ -1.71
XRCC4-203ENST00000396027 EML1O00423 815 aa4.34□□□□□ -1.71
XRCC4-203ENST00000396027 CCP110O43303 1012 aa4.34□□□□□ -1.71
XRCC4-203ENST00000396027 STAU1O95793 577 aaKnown RBP4.34□□□□□ -1.71
XRCC4-203ENST00000396027 GUCY2CP25092 1073 aa4.34□□□□□ -1.71
XRCC4-203ENST00000396027 SCNN1DP51172 638 aa4.34□□□□□ -1.71
XRCC4-203ENST00000396027 RIPK4P57078 832 aa4.34□□□□□ -1.71
XRCC4-203ENST00000396027 SRPK2P78362 688 aaKnown RBP4.34□□□□□ -1.71
XRCC4-203ENST00000396027 ZRSR2Q15696 482 aaKnown RBP4.34□□□□□ -1.71
XRCC4-203ENST00000396027 TEX35Q5T0J7 233 aa4.34□□□□□ -1.71
XRCC4-203ENST00000396027 B4GALNT3Q6L9W6 998 aa4.34□□□□□ -1.71
XRCC4-203ENST00000396027 JMYQ8N9B5 988 aa4.34□□□□□ -1.71
XRCC4-203ENST00000396027 TBC1D22AQ8WUA7 517 aa4.34□□□□□ -1.71
XRCC4-203ENST00000396027 UTP4Q969X6 686 aaKnown RBP4.34□□□□□ -1.71
XRCC4-203ENST00000396027 GBP4Q96PP9 640 aa4.34□□□□□ -1.71
XRCC4-203ENST00000396027 SLC4A9Q96Q91 983 aa4.34□□□□□ -1.71
XRCC4-203ENST00000396027 TEX13AQ9BXU3 409 aaPredicted RBP4.34□□□□□ -1.71
XRCC4-203ENST00000396027 FAM107BQ9H098 131 aa4.34□□□□□ -1.71
XRCC4-203ENST00000396027 ABCF2Q9UG63 623 aa4.34□□□□□ -1.71
XRCC4-203ENST00000396027 KIAA1107Q9UPP5 1409 aa4.33□□□□□ -1.72
XRCC4-203ENST00000396027 A6NJY4 79 aa4.33□□□□□ -1.72
XRCC4-203ENST00000396027 HOXA10P31260 410 aaPredicted RBP4.33□□□□□ -1.72
XRCC4-203ENST00000396027 TXLNAP40222 546 aa4.33□□□□□ -1.72
XRCC4-203ENST00000396027 IRX1P78414 480 aaPredicted RBP4.33□□□□□ -1.72
XRCC4-203ENST00000396027 KIAA2012Q0VF49 1180 aa4.33□□□□□ -1.72
XRCC4-203ENST00000396027 CPSF6Q16630 551 aaKnown RBP eCLIP4.33□□□□□ -1.72
XRCC4-203ENST00000396027 MSMPQ1L6U9 139 aa4.33□□□□□ -1.72
XRCC4-203ENST00000396027 FILIP1LQ4L180 1135 aa4.33□□□□□ -1.72
XRCC4-203ENST00000396027 GJC2Q5T442 439 aaPredicted RBP4.33□□□□□ -1.72
XRCC4-203ENST00000396027 LRCH2Q5VUJ6 765 aa4.33□□□□□ -1.72
XRCC4-203ENST00000396027 FAM35AQ86V20 835 aa4.33□□□□□ -1.72
XRCC4-203ENST00000396027 CLEC10AQ8IUN9 316 aa4.33□□□□□ -1.72
XRCC4-203ENST00000396027 CEP63Q96MT8 703 aa4.33□□□□□ -1.72
XRCC4-203ENST00000396027 CEP89Q96ST8 783 aa4.33□□□□□ -1.72
XRCC4-203ENST00000396027 FAM83CQ9BQN1 747 aa4.33□□□□□ -1.72
XRCC4-203ENST00000396027 UTP14AQ9BVJ6 771 aaKnown RBP4.33□□□□□ -1.72
XRCC4-203ENST00000396027 UBA5Q9GZZ9 404 aa4.33□□□□□ -1.72
XRCC4-203ENST00000396027 SLC52A1Q9NWF4 448 aa4.33□□□□□ -1.72
XRCC4-203ENST00000396027 ANKIB1Q9P2G1 1089 aa4.33□□□□□ -1.72
XRCC4-203ENST00000396027 CEP126Q9P2H0 1117 aa4.33□□□□□ -1.72
XRCC4-203ENST00000396027 NUDCQ9Y266 331 aa4.33□□□□□ -1.72
XRCC4-203ENST00000396027 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.33□□□□□ -1.72
XRCC4-203ENST00000396027 UHRF1BP1LA0JNW5 1464 aa4.33□□□□□ -1.72
XRCC4-203ENST00000396027 DHX57Q6P158 1386 aaKnown RBP4.33□□□□□ -1.72
XRCC4-203ENST00000396027 VGLL3A8MV65 326 aa4.32□□□□□ -1.72
XRCC4-203ENST00000396027 HTATSF1O43719 755 aaKnown RBP4.32□□□□□ -1.72
XRCC4-203ENST00000396027 FRAT2O75474 233 aaPredicted RBP4.32□□□□□ -1.72
XRCC4-203ENST00000396027 EIF4G2P78344 907 aaKnown RBP eCLIP4.32□□□□□ -1.72
XRCC4-203ENST00000396027 NUCB2P80303 420 aa4.32□□□□□ -1.72
XRCC4-203ENST00000396027 MYBPC2Q14324 1141 aa4.32□□□□□ -1.72
XRCC4-203ENST00000396027 CCDC96Q2M329 555 aa4.32□□□□□ -1.72
XRCC4-203ENST00000396027 MUM1L1Q5H9M0 696 aa4.32□□□□□ -1.72
XRCC4-203ENST00000396027 JAKMIP3Q5VZ66 844 aa4.32□□□□□ -1.72
XRCC4-203ENST00000396027 FMNL3Q8IVF7 1028 aa4.32□□□□□ -1.72
XRCC4-203ENST00000396027 TMTC2Q8N394 836 aa4.32□□□□□ -1.72
XRCC4-203ENST00000396027 TXLNBQ8N3L3 684 aa4.32□□□□□ -1.72
XRCC4-203ENST00000396027 LPIN3Q9BQK8 851 aa4.32□□□□□ -1.72
XRCC4-203ENST00000396027 SLKQ9H2G2 1235 aaPredicted RBP4.32□□□□□ -1.72
XRCC4-203ENST00000396027 CWC22Q9HCG8 908 aaKnown RBP4.32□□□□□ -1.72
XRCC4-203ENST00000396027 TBC1D2BQ9UPU7 963 aa4.32□□□□□ -1.72
XRCC4-203ENST00000396027 PEG3Q9GZU2 1588 aa4.32□□□□□ -1.72
XRCC4-203ENST00000396027 WDR64B1ANS9 1081 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 H0YHG0 523 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 COL19A1Q14993 1142 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 WDR78Q5VTH9 848 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 KLHL10Q6JEL2 608 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.31□□□□□ -1.72
XRCC4-203ENST00000396027 SDR16C5Q8N3Y7 309 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 PIK3R5Q8WYR1 880 aa4.31□□□□□ -1.72
XRCC4-203ENST00000396027 FAM84AQ96KN4 292 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms