RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 EIF5P55010 431 aaKnown RBP18.18■□□□□ 0.5
CPSF7-202ENST00000394888 TBC1D10CQ8IV04 446 aa18.18■□□□□ 0.5
CPSF7-202ENST00000394888 CCDC39Q9UFE4 941 aa18.18■□□□□ 0.5
CPSF7-202ENST00000394888 MCM5P33992 734 aa18.18■□□□□ 0.5
CPSF7-202ENST00000394888 CCT2P78371 535 aaKnown RBP18.18■□□□□ 0.5
CPSF7-202ENST00000394888 APPBP2Q92624 585 aa18.18■□□□□ 0.5
CPSF7-202ENST00000394888 SENP2Q9HC62 589 aa18.18■□□□□ 0.5
CPSF7-202ENST00000394888 RCOR1Q9UKL0 485 aa18.18■□□□□ 0.5
CPSF7-202ENST00000394888 MYH13Q9UKX3 1938 aa18.17■□□□□ 0.5
CPSF7-202ENST00000394888 ZNF830Q96NB3 372 aaPredicted RBP18.17■□□□□ 0.5
CPSF7-202ENST00000394888 ERVV-1B6SEH8 477 aa18.17■□□□□ 0.5
CPSF7-202ENST00000394888 IFIT5Q13325 482 aaKnown RBP18.17■□□□□ 0.5
CPSF7-202ENST00000394888 CAMK4Q16566 473 aa18.17■□□□□ 0.5
CPSF7-202ENST00000394888 KIF6Q6ZMV9 814 aa18.17■□□□□ 0.5
CPSF7-202ENST00000394888 TAF1LQ8IZX4 1826 aa18.17■□□□□ 0.5
CPSF7-202ENST00000394888 PHKA1P46020 1223 aa18.17■□□□□ 0.5
CPSF7-202ENST00000394888 SPATA32Q96LK8 384 aa18.17■□□□□ 0.5
CPSF7-202ENST00000394888 SCAND2PQ9GZW5 306 aaPredicted RBP18.17■□□□□ 0.5
CPSF7-202ENST00000394888 SNAP23O00161 211 aa18.16■□□□□ 0.5
CPSF7-202ENST00000394888 USP28Q96RU2 1077 aa18.16■□□□□ 0.5
CPSF7-202ENST00000394888 AKAP2Q9Y2D5 859 aa18.16■□□□□ 0.5
CPSF7-202ENST00000394888 LAMB1P07942 1786 aa18.16■□□□□ 0.5
CPSF7-202ENST00000394888 IRS4O14654 1257 aaPredicted RBP18.16■□□□□ 0.5
CPSF7-202ENST00000394888 GPAA1O43292 621 aa18.16■□□□□ 0.5
CPSF7-202ENST00000394888 PDE8BO95263 885 aa18.16■□□□□ 0.5
CPSF7-202ENST00000394888 STARD3NLO95772 234 aa18.16■□□□□ 0.5
CPSF7-202ENST00000394888 HAND2P61296 217 aa18.16■□□□□ 0.5
CPSF7-202ENST00000394888 TYRO3Q06418 890 aa18.16■□□□□ 0.5
CPSF7-202ENST00000394888 ATP2B3Q16720 1220 aa18.16■□□□□ 0.5
CPSF7-202ENST00000394888 CYB5R4Q7L1T6 521 aa18.16■□□□□ 0.5
CPSF7-202ENST00000394888 GJB4Q9NTQ9 266 aa18.16■□□□□ 0.5
CPSF7-202ENST00000394888 BAZ2AQ9UIF9 1905 aaKnown RBP18.16■□□□□ 0.5
CPSF7-202ENST00000394888 IL6STP40189 918 aaPredicted RBP18.16■□□□□ 0.5
CPSF7-202ENST00000394888 ITPK1Q13572 414 aa18.16■□□□□ 0.5
CPSF7-202ENST00000394888 TTC39AQ5SRH9 613 aa18.16■□□□□ 0.5
CPSF7-202ENST00000394888 MPNDQ8N594 471 aa18.16■□□□□ 0.5
CPSF7-202ENST00000394888 SUSD4Q5VX71 490 aa18.15■□□□□ 0.5
CPSF7-202ENST00000394888 WWC3Q9ULE0 1092 aa18.15■□□□□ 0.5
CPSF7-202ENST00000394888 SPATA31A1Q5TZJ5 1347 aa18.15■□□□□ 0.5
CPSF7-202ENST00000394888 EPB41L4AQ9HCS5 686 aaPredicted RBP18.15■□□□□ 0.5
CPSF7-202ENST00000394888 MYH6P13533 1939 aa18.15■□□□□ 0.5
CPSF7-202ENST00000394888 ZNF330Q9Y3S2 320 aaPredicted RBP18.14■□□□□ 0.5
CPSF7-202ENST00000394888 ZSCAN16Q9H4T2 348 aaPredicted RBP18.14■□□□□ 0.49
CPSF7-202ENST00000394888 TBC1D2BQ9UPU7 963 aa18.14■□□□□ 0.49
CPSF7-202ENST00000394888 KIF28PB7ZC32 967 aa18.14■□□□□ 0.49
CPSF7-202ENST00000394888 CAMTA2O94983 1202 aa18.14■□□□□ 0.49
CPSF7-202ENST00000394888 CSPP1Q1MSJ5 1256 aa18.14■□□□□ 0.49
CPSF7-202ENST00000394888 CCDC102BQ68D86 513 aa18.14■□□□□ 0.49
CPSF7-202ENST00000394888 WDR19Q8NEZ3 1342 aa18.14■□□□□ 0.49
CPSF7-202ENST00000394888 LUZP1Q86V48 1076 aa18.13■□□□□ 0.49
CPSF7-202ENST00000394888 ANP32BQ92688 251 aaKnown RBP18.13■□□□□ 0.49
CPSF7-202ENST00000394888 ZFYP08048 801 aaPredicted RBP18.13■□□□□ 0.49
CPSF7-202ENST00000394888 CCDC158Q5M9N0 1113 aa18.13■□□□□ 0.49
CPSF7-202ENST00000394888 CKAP2LQ8IYA6 745 aa18.13■□□□□ 0.49
CPSF7-202ENST00000394888 C17orf53Q8N3J3 647 aaPredicted RBP18.13■□□□□ 0.49
CPSF7-202ENST00000394888 MARCH10Q8NA82 808 aaPredicted RBP18.13■□□□□ 0.49
CPSF7-202ENST00000394888 TTC12Q9H892 705 aaPredicted RBP18.13■□□□□ 0.49
CPSF7-202ENST00000394888 CBX8Q9HC52 389 aa18.13■□□□□ 0.49
CPSF7-202ENST00000394888 FAM217BQ9NTX9 383 aaPredicted RBP18.13■□□□□ 0.49
CPSF7-202ENST00000394888 NAP1L5Q96NT1 182 aaPredicted RBP18.13■□□□□ 0.49
CPSF7-202ENST00000394888 NUP62CLQ9H1M0 184 aa18.13■□□□□ 0.49
CPSF7-202ENST00000394888 SPTLC3Q9NUV7 552 aa18.13■□□□□ 0.49
CPSF7-202ENST00000394888 TNRC6CQ9HCJ0 1690 aaKnown RBP18.13■□□□□ 0.49
CPSF7-202ENST00000394888 PDE8AO60658 829 aa18.12■□□□□ 0.49
CPSF7-202ENST00000394888 LDHAL6AQ6ZMR3 332 aa18.12■□□□□ 0.49
CPSF7-202ENST00000394888 INCENPQ9NQS7 918 aa18.12■□□□□ 0.49
CPSF7-202ENST00000394888 BTAF1O14981 1849 aa18.12■□□□□ 0.49
CPSF7-202ENST00000394888 IQCB1Q15051 598 aa18.12■□□□□ 0.49
CPSF7-202ENST00000394888 PLA2G4DQ86XP0 818 aa18.12■□□□□ 0.49
CPSF7-202ENST00000394888 RTL9Q8NET4 1388 aa18.12■□□□□ 0.49
CPSF7-202ENST00000394888 WTIPA6NIX2 430 aaPredicted RBP18.12■□□□□ 0.49
CPSF7-202ENST00000394888 MAP3K11Q16584 847 aa18.12■□□□□ 0.49
CPSF7-202ENST00000394888 DZIP3Q86Y13 1208 aaKnown RBP18.12■□□□□ 0.49
CPSF7-202ENST00000394888 HSP90B1P14625 803 aaKnown RBP18.11■□□□□ 0.49
CPSF7-202ENST00000394888 METTL24Q5JXM2 366 aa18.11■□□□□ 0.49
CPSF7-202ENST00000394888 OTUD7BQ6GQQ9 843 aa18.11■□□□□ 0.49
CPSF7-202ENST00000394888 NID2Q14112 1375 aa18.11■□□□□ 0.49
CPSF7-202ENST00000394888 MYH2Q9UKX2 1941 aa18.11■□□□□ 0.49
CPSF7-202ENST00000394888 LY75O60449 1722 aa18.11■□□□□ 0.49
CPSF7-202ENST00000394888 NTSR2O95665 410 aa18.11■□□□□ 0.49
CPSF7-202ENST00000394888 SEC31BQ9NQW1 1179 aa18.11■□□□□ 0.49
CPSF7-202ENST00000394888 PRC1O43663 620 aa18.11■□□□□ 0.49
CPSF7-202ENST00000394888 MSNP26038 577 aaKnown RBP18.11■□□□□ 0.49
CPSF7-202ENST00000394888 FAM200AQ8TCP9 573 aa18.11■□□□□ 0.49
CPSF7-202ENST00000394888 MAST2Q6P0Q8 1798 aa18.11■□□□□ 0.49
CPSF7-202ENST00000394888 UBE2Q2LH0YL09 131 aa18.1■□□□□ 0.49
CPSF7-202ENST00000394888 TERF1P54274 439 aa18.1■□□□□ 0.49
CPSF7-202ENST00000394888 ANO6Q4KMQ2 910 aa18.1■□□□□ 0.49
CPSF7-202ENST00000394888 ZMYM6O95789 1325 aa18.1■□□□□ 0.49
CPSF7-202ENST00000394888 FOSBP53539 338 aa18.1■□□□□ 0.49
CPSF7-202ENST00000394888 UBE3CQ15386 1083 aa18.1■□□□□ 0.49
CPSF7-202ENST00000394888 NTRK3Q16288 839 aa18.1■□□□□ 0.49
CPSF7-202ENST00000394888 C11orf57Q6ZUT1 292 aaPredicted RBP18.1■□□□□ 0.49
CPSF7-202ENST00000394888 PIBF1Q8WXW3 757 aa18.1■□□□□ 0.49
CPSF7-202ENST00000394888 STRBPQ96SI9 672 aaKnown RBP18.1■□□□□ 0.49
CPSF7-202ENST00000394888 ZNF532Q9HCE3 1301 aa18.1■□□□□ 0.49
CPSF7-202ENST00000394888 CDK5RAP2Q96SN8 1893 aa18.1■□□□□ 0.49
CPSF7-202ENST00000394888 A0A087WWV3 80 aa18.1■□□□□ 0.49
CPSF7-202ENST00000394888 PDE6AP16499 860 aa18.1■□□□□ 0.49
CPSF7-202ENST00000394888 RASGRF1Q13972 1273 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms