RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 LZTFL1Q9NQ48 299 aa15.31■□□□□ 0.04
NFKB1-202ENST00000394820 FMN2Q9NZ56 1722 aa15.31■□□□□ 0.04
NFKB1-202ENST00000394820 DNAJC10Q8IXB1 793 aa15.31■□□□□ 0.04
NFKB1-202ENST00000394820 HELBQ8NG08 1087 aaPredicted RBP15.31■□□□□ 0.04
NFKB1-202ENST00000394820 MAP4K1Q92918 833 aa15.31■□□□□ 0.04
NFKB1-202ENST00000394820 MYL10Q9BUA6 226 aa15.31■□□□□ 0.04
NFKB1-202ENST00000394820 CARD6Q9BX69 1037 aa15.31■□□□□ 0.04
NFKB1-202ENST00000394820 XPO4Q9C0E2 1151 aaKnown RBP15.31■□□□□ 0.04
NFKB1-202ENST00000394820 FKBP15Q5T1M5 1219 aa15.3■□□□□ 0.04
NFKB1-202ENST00000394820 AKAP17AQ02040 695 aaKnown RBP15.3■□□□□ 0.04
NFKB1-202ENST00000394820 GPS2Q13227 327 aa15.3■□□□□ 0.04
NFKB1-202ENST00000394820 NEK11Q8NG66 645 aa15.3■□□□□ 0.04
NFKB1-202ENST00000394820 ASAP1Q9ULH1 1129 aa15.3■□□□□ 0.04
NFKB1-202ENST00000394820 A0A0G2JLW4 131 aa15.3■□□□□ 0.04
NFKB1-202ENST00000394820 PI16Q6UXB8 463 aa15.3■□□□□ 0.04
NFKB1-202ENST00000394820 CNNM1Q9NRU3 951 aa15.3■□□□□ 0.04
NFKB1-202ENST00000394820 TBC1D2BQ9UPU7 963 aa15.3■□□□□ 0.04
NFKB1-202ENST00000394820 SEC31AO94979 1220 aaKnown RBP15.29■□□□□ 0.04
NFKB1-202ENST00000394820 IL2RBP14784 551 aa15.29■□□□□ 0.04
NFKB1-202ENST00000394820 GYS2P54840 703 aa15.29■□□□□ 0.04
NFKB1-202ENST00000394820 MRPS27Q92552 414 aaKnown RBP15.29■□□□□ 0.04
NFKB1-202ENST00000394820 PGBD1Q96JS3 809 aa15.29■□□□□ 0.04
NFKB1-202ENST00000394820 PAG1Q9NWQ8 432 aa15.29■□□□□ 0.04
NFKB1-202ENST00000394820 A0A1B0GUL7 405 aa15.29■□□□□ 0.04
NFKB1-202ENST00000394820 COBLO75128 1261 aa15.29■□□□□ 0.04
NFKB1-202ENST00000394820 TAF5LO75529 589 aa15.29■□□□□ 0.04
NFKB1-202ENST00000394820 MCMDC2Q4G0Z9 681 aa15.29■□□□□ 0.04
NFKB1-202ENST00000394820 MEGF6O75095 1541 aa15.29■□□□□ 0.04
NFKB1-202ENST00000394820 DNA2P51530 1060 aa15.29■□□□□ 0.04
NFKB1-202ENST00000394820 KIF6Q6ZMV9 814 aa15.29■□□□□ 0.04
NFKB1-202ENST00000394820 LRRC8AQ8IWT6 810 aa15.29■□□□□ 0.04
NFKB1-202ENST00000394820 PRDM4Q9UKN5 801 aa15.29■□□□□ 0.04
NFKB1-202ENST00000394820 NALCNQ8IZF0 1738 aa15.28■□□□□ 0.04
NFKB1-202ENST00000394820 CNNM3Q8NE01 707 aa15.28■□□□□ 0.04
NFKB1-202ENST00000394820 ZNF397Q8NF99 534 aaPredicted RBP15.28■□□□□ 0.04
NFKB1-202ENST00000394820 SRRTQ9BXP5 876 aaKnown RBP15.28■□□□□ 0.04
NFKB1-202ENST00000394820 IQSEC3Q9UPP2 1182 aaPredicted RBP15.28■□□□□ 0.04
NFKB1-202ENST00000394820 U3KPZ7 1027 aaPredicted RBP15.28■□□□□ 0.04
NFKB1-202ENST00000394820 ADAMTS2O95450 1211 aa15.28■□□□□ 0.04
NFKB1-202ENST00000394820 LONRF3Q496Y0 759 aa15.28■□□□□ 0.04
NFKB1-202ENST00000394820 BRINP3Q76B58 766 aa15.28■□□□□ 0.04
NFKB1-202ENST00000394820 CCDC12Q8WUD4 166 aaPredicted RBP15.28■□□□□ 0.04
NFKB1-202ENST00000394820 KDM6AO15550 1401 aaPredicted RBP15.28■□□□□ 0.04
NFKB1-202ENST00000394820 RPAP1Q9BWH6 1393 aaPredicted RBP15.28■□□□□ 0.04
NFKB1-202ENST00000394820 ADORA1P30542 326 aa15.28■□□□□ 0.04
NFKB1-202ENST00000394820 AFMP43652 599 aa15.28■□□□□ 0.04
NFKB1-202ENST00000394820 ZNF827Q17R98 1081 aa15.28■□□□□ 0.04
NFKB1-202ENST00000394820 METTL24Q5JXM2 366 aa15.28■□□□□ 0.04
NFKB1-202ENST00000394820 CERS3Q8IU89 383 aa15.28■□□□□ 0.04
NFKB1-202ENST00000394820 TRIM34Q9BYJ4 488 aa15.28■□□□□ 0.04
NFKB1-202ENST00000394820 COPRSQ9NQ92 184 aa15.28■□□□□ 0.04
NFKB1-202ENST00000394820 RGPD2P0DJD1 1756 aa15.27■□□□□ 0.04
NFKB1-202ENST00000394820 CCDC158Q5M9N0 1113 aa15.27■□□□□ 0.04
NFKB1-202ENST00000394820 C10orf67Q8IYJ2 551 aa15.27■□□□□ 0.04
NFKB1-202ENST00000394820 TRMT44Q8IYL2 757 aaKnown RBP15.27■□□□□ 0.04
NFKB1-202ENST00000394820 DESI2Q9BSY9 194 aa15.27■□□□□ 0.04
NFKB1-202ENST00000394820 ZCCHC17Q9NP64 241 aaKnown RBP15.27■□□□□ 0.04
NFKB1-202ENST00000394820 SAFBQ15424 915 aaKnown RBP eCLIP15.27■□□□□ 0.03
NFKB1-202ENST00000394820 KIF4BQ2VIQ3 1234 aa15.27■□□□□ 0.03
NFKB1-202ENST00000394820 HSP90B2PQ58FF3 399 aa15.27■□□□□ 0.03
NFKB1-202ENST00000394820 PHKBQ93100 1093 aa15.27■□□□□ 0.03
NFKB1-202ENST00000394820 GDAP1L1Q96MZ0 367 aa15.27■□□□□ 0.03
NFKB1-202ENST00000394820 BTG4Q9NY30 223 aa15.27■□□□□ 0.03
NFKB1-202ENST00000394820 SLAIN2Q9P270 581 aa15.27■□□□□ 0.03
NFKB1-202ENST00000394820 LTN1O94822 1766 aa15.27■□□□□ 0.03
NFKB1-202ENST00000394820 CYP21A2P08686 494 aa15.27■□□□□ 0.03
NFKB1-202ENST00000394820 ATP5JP18859 108 aa15.27■□□□□ 0.03
NFKB1-202ENST00000394820 DPCR1Q3MIW9 517 aa15.27■□□□□ 0.03
NFKB1-202ENST00000394820 ZKSCAN3Q9BRR0 538 aa15.27■□□□□ 0.03
NFKB1-202ENST00000394820 SYKP43405 635 aa15.26■□□□□ 0.03
NFKB1-202ENST00000394820 SCRN1Q12765 414 aa15.26■□□□□ 0.03
NFKB1-202ENST00000394820 FBXO38Q6PIJ6 1188 aa15.26■□□□□ 0.03
NFKB1-202ENST00000394820 STAMQ92783 540 aa15.26■□□□□ 0.03
NFKB1-202ENST00000394820 ACSBG1Q96GR2 724 aa15.26■□□□□ 0.03
NFKB1-202ENST00000394820 NFAT5O94916 1531 aa15.26■□□□□ 0.03
NFKB1-202ENST00000394820 NUTM2BA6NNL0 878 aaPredicted RBP15.26■□□□□ 0.03
NFKB1-202ENST00000394820 NUTM2EB1AL46 878 aaPredicted RBP15.26■□□□□ 0.03
NFKB1-202ENST00000394820 SPTLC2O15270 562 aa15.26■□□□□ 0.03
NFKB1-202ENST00000394820 BMS1Q14692 1282 aaKnown RBP15.26■□□□□ 0.03
NFKB1-202ENST00000394820 LDHAL6AQ6ZMR3 332 aa15.26■□□□□ 0.03
NFKB1-202ENST00000394820 NUTM2AQ8IVF1 878 aaPredicted RBP15.26■□□□□ 0.03
NFKB1-202ENST00000394820 CMTR1Q8N1G2 835 aaKnown RBP15.26■□□□□ 0.03
NFKB1-202ENST00000394820 TIGD1Q96MW7 591 aa15.26■□□□□ 0.03
NFKB1-202ENST00000394820 ZNF335Q9H4Z2 1342 aaPredicted RBP15.26■□□□□ 0.03
NFKB1-202ENST00000394820 RHOXF2BP0C7M4 288 aa15.25■□□□□ 0.03
NFKB1-202ENST00000394820 DHX8Q14562 1220 aaKnown RBP15.25■□□□□ 0.03
NFKB1-202ENST00000394820 IMMTQ16891 758 aaKnown RBP15.25■□□□□ 0.03
NFKB1-202ENST00000394820 RHOXF2Q9BQY4 288 aa15.25■□□□□ 0.03
NFKB1-202ENST00000394820 SPATA31A3Q5VYP0 1347 aa15.25■□□□□ 0.03
NFKB1-202ENST00000394820 PXDNLA1KZ92 1463 aa15.25■□□□□ 0.03
NFKB1-202ENST00000394820 hCG_1642624A0A1W2PR95 340 aa15.25■□□□□ 0.03
NFKB1-202ENST00000394820 ANKRD65E5RJM6 399 aa15.25■□□□□ 0.03
NFKB1-202ENST00000394820 CASQ1P31415 396 aa15.25■□□□□ 0.03
NFKB1-202ENST00000394820 IFIT5Q13325 482 aaKnown RBP15.25■□□□□ 0.03
NFKB1-202ENST00000394820 ATP1A3P13637 1013 aa15.25■□□□□ 0.03
NFKB1-202ENST00000394820 ZSCAN16Q9H4T2 348 aaPredicted RBP15.25■□□□□ 0.03
NFKB1-202ENST00000394820 TRMT112Q9UI30 125 aaKnown RBP15.25■□□□□ 0.03
NFKB1-202ENST00000394820 XRN1Q8IZH2 1706 aaKnown RBP15.24■□□□□ 0.03
NFKB1-202ENST00000394820 NDUFA8P51970 172 aa15.24■□□□□ 0.03
NFKB1-202ENST00000394820 ADKP55263 362 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms