RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 TFIP11Q9UBB9 837 aaKnown RBP18.06■□□□□ 0.48
UBE2D3-207ENST00000394801 LOC102724428A0A0B4J2F2 783 aa18.05■□□□□ 0.48
UBE2D3-207ENST00000394801 PTPDC1A2A3K4 754 aa18.05■□□□□ 0.48
UBE2D3-207ENST00000394801 ATP6V1AP38606 617 aa18.05■□□□□ 0.48
UBE2D3-207ENST00000394801 SIK1P57059 783 aa18.05■□□□□ 0.48
UBE2D3-207ENST00000394801 MB21D2Q8IYB1 491 aaPredicted RBP18.05■□□□□ 0.48
UBE2D3-207ENST00000394801 WDR19Q8NEZ3 1342 aa18.05■□□□□ 0.48
UBE2D3-207ENST00000394801 PARP10Q53GL7 1025 aa18.05■□□□□ 0.48
UBE2D3-207ENST00000394801 CFAP45Q9UL16 551 aa18.05■□□□□ 0.48
UBE2D3-207ENST00000394801 SPATA31A5Q5VU36 1347 aa18.04■□□□□ 0.48
UBE2D3-207ENST00000394801 SPATA31A7Q8IWB4 1347 aa18.04■□□□□ 0.48
UBE2D3-207ENST00000394801 CAMTA2O94983 1202 aa18.04■□□□□ 0.48
UBE2D3-207ENST00000394801 ADAMTS2O95450 1211 aa18.04■□□□□ 0.48
UBE2D3-207ENST00000394801 MCM5P33992 734 aa18.04■□□□□ 0.48
UBE2D3-207ENST00000394801 TPRNQ4KMQ1 711 aa18.04■□□□□ 0.48
UBE2D3-207ENST00000394801 SLC9C2Q5TAH2 1124 aa18.04■□□□□ 0.48
UBE2D3-207ENST00000394801 UTP14AQ9BVJ6 771 aaKnown RBP18.04■□□□□ 0.48
UBE2D3-207ENST00000394801 HCLS1P14317 486 aaPredicted RBP18.04■□□□□ 0.48
UBE2D3-207ENST00000394801 LIG1P18858 919 aa18.04■□□□□ 0.48
UBE2D3-207ENST00000394801 MSNP26038 577 aaKnown RBP18.04■□□□□ 0.48
UBE2D3-207ENST00000394801 ADD1P35611 737 aaKnown RBP18.04■□□□□ 0.48
UBE2D3-207ENST00000394801 PHKA1P46020 1223 aa18.04■□□□□ 0.48
UBE2D3-207ENST00000394801 CCT2P78371 535 aaKnown RBP18.04■□□□□ 0.48
UBE2D3-207ENST00000394801 BARGINQ6ZT62 677 aa18.04■□□□□ 0.48
UBE2D3-207ENST00000394801 CHST3Q7LGC8 479 aa18.04■□□□□ 0.48
UBE2D3-207ENST00000394801 PIH1D3Q9NQM4 214 aaKnown RBP18.04■□□□□ 0.48
UBE2D3-207ENST00000394801 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.04■□□□□ 0.48
UBE2D3-207ENST00000394801 CCDC39Q9UFE4 941 aa18.04■□□□□ 0.48
UBE2D3-207ENST00000394801 ARAP2Q8WZ64 1704 aa18.03■□□□□ 0.48
UBE2D3-207ENST00000394801 ZNF213O14771 459 aa18.03■□□□□ 0.48
UBE2D3-207ENST00000394801 ATL3Q6DD88 541 aa18.03■□□□□ 0.48
UBE2D3-207ENST00000394801 NCOA7Q8NI08 942 aa18.03■□□□□ 0.48
UBE2D3-207ENST00000394801 LTBP4Q8N2S1 1624 aa18.03■□□□□ 0.48
UBE2D3-207ENST00000394801 RTL9Q8NET4 1388 aa18.03■□□□□ 0.48
UBE2D3-207ENST00000394801 HAND2P61296 217 aa18.03■□□□□ 0.48
UBE2D3-207ENST00000394801 PGBD1Q96JS3 809 aa18.03■□□□□ 0.48
UBE2D3-207ENST00000394801 NCOA5Q9HCD5 579 aaKnown RBP18.03■□□□□ 0.48
UBE2D3-207ENST00000394801 GOLGA6L4A6NEF3 574 aa18.02■□□□□ 0.48
UBE2D3-207ENST00000394801 ITPK1Q13572 414 aa18.02■□□□□ 0.48
UBE2D3-207ENST00000394801 HSP90AA2PQ14568 343 aaPredicted RBP18.02■□□□□ 0.48
UBE2D3-207ENST00000394801 RBM43Q6ZSC3 357 aaKnown RBP18.02■□□□□ 0.48
UBE2D3-207ENST00000394801 NUP62CLQ9H1M0 184 aa18.02■□□□□ 0.48
UBE2D3-207ENST00000394801 DDX19AQ9NUU7 478 aaKnown RBP18.02■□□□□ 0.48
UBE2D3-207ENST00000394801 ZKSCAN5Q9Y2L8 839 aa18.02■□□□□ 0.48
UBE2D3-207ENST00000394801 DDX60Q8IY21 1712 aaKnown RBP18.02■□□□□ 0.48
UBE2D3-207ENST00000394801 TCRBV5S4A2TA0A5A2 114 aa18.02■□□□□ 0.47
UBE2D3-207ENST00000394801 PRC1O43663 620 aa18.02■□□□□ 0.47
UBE2D3-207ENST00000394801 CCDC192P0DO97 292 aa18.02■□□□□ 0.47
UBE2D3-207ENST00000394801 ACSBG1Q96GR2 724 aa18.02■□□□□ 0.47
UBE2D3-207ENST00000394801 MYH14Q7Z406 1995 aaKnown RBP18.01■□□□□ 0.47
UBE2D3-207ENST00000394801 ZNF500O60304 480 aaPredicted RBP18.01■□□□□ 0.47
UBE2D3-207ENST00000394801 ANTXR2P58335 489 aa18.01■□□□□ 0.47
UBE2D3-207ENST00000394801 MAP3K11Q16584 847 aa18.01■□□□□ 0.47
UBE2D3-207ENST00000394801 RCOR1Q9UKL0 485 aa18.01■□□□□ 0.47
UBE2D3-207ENST00000394801 PHLPP1O60346 1717 aa18.01■□□□□ 0.47
UBE2D3-207ENST00000394801 SLC5A1P13866 664 aa18.01■□□□□ 0.47
UBE2D3-207ENST00000394801 FDPSP14324 419 aaKnown RBP18.01■□□□□ 0.47
UBE2D3-207ENST00000394801 PDE6AP16499 860 aa18.01■□□□□ 0.47
UBE2D3-207ENST00000394801 GPHNQ9NQX3 736 aaPredicted RBP18.01■□□□□ 0.47
UBE2D3-207ENST00000394801 DACT1Q9NYF0 836 aa18.01■□□□□ 0.47
UBE2D3-207ENST00000394801 ZNF532Q9HCE3 1301 aa18■□□□□ 0.47
UBE2D3-207ENST00000394801 MYO5AQ9Y4I1 1855 aaKnown RBP18■□□□□ 0.47
UBE2D3-207ENST00000394801 CARMIL3Q8ND23 1372 aa18■□□□□ 0.47
UBE2D3-207ENST00000394801 IDH1O75874 414 aaKnown RBP18■□□□□ 0.47
UBE2D3-207ENST00000394801 NTSR2O95665 410 aa18■□□□□ 0.47
UBE2D3-207ENST00000394801 HELBQ8NG08 1087 aaPredicted RBP18■□□□□ 0.47
UBE2D3-207ENST00000394801 MYH15Q9Y2K3 1946 aa18■□□□□ 0.47
UBE2D3-207ENST00000394801 DHX16O60231 1041 aaKnown RBP17.99■□□□□ 0.47
UBE2D3-207ENST00000394801 KDM4AO75164 1064 aa17.99■□□□□ 0.47
UBE2D3-207ENST00000394801 ALX1Q15699 326 aa17.99■□□□□ 0.47
UBE2D3-207ENST00000394801 CCDC152Q4G0S7 254 aa17.99■□□□□ 0.47
UBE2D3-207ENST00000394801 RALYLQ86SE5 291 aaKnown RBP17.99■□□□□ 0.47
UBE2D3-207ENST00000394801 SPATA5Q8NB90 893 aa17.99■□□□□ 0.47
UBE2D3-207ENST00000394801 SMARCC1Q92922 1105 aaPredicted RBP17.99■□□□□ 0.47
UBE2D3-207ENST00000394801 MPHOSPH8Q99549 860 aa17.99■□□□□ 0.47
UBE2D3-207ENST00000394801 NBPF3Q9H094 633 aa17.99■□□□□ 0.47
UBE2D3-207ENST00000394801 HPS5Q9UPZ3 1129 aa17.99■□□□□ 0.47
UBE2D3-207ENST00000394801 RGS22Q8NE09 1264 aa17.99■□□□□ 0.47
UBE2D3-207ENST00000394801 SEC31BQ9NQW1 1179 aa17.99■□□□□ 0.47
UBE2D3-207ENST00000394801 STRBPQ96SI9 672 aaKnown RBP17.98■□□□□ 0.47
UBE2D3-207ENST00000394801 CLSTN2Q9H4D0 955 aa17.98■□□□□ 0.47
UBE2D3-207ENST00000394801 USP25Q9UHP3 1055 aa17.98■□□□□ 0.47
UBE2D3-207ENST00000394801 WWC3Q9ULE0 1092 aa17.98■□□□□ 0.47
UBE2D3-207ENST00000394801 NAP1L2Q9ULW6 460 aaPredicted RBP17.98■□□□□ 0.47
UBE2D3-207ENST00000394801 ZMYM6O95789 1325 aa17.98■□□□□ 0.47
UBE2D3-207ENST00000394801 TNMDQ9H2S6 317 aa17.98■□□□□ 0.47
UBE2D3-207ENST00000394801 NIP7Q9Y221 180 aaKnown RBP eCLIP17.98■□□□□ 0.47
UBE2D3-207ENST00000394801 LAMB2P55268 1798 aa17.97■□□□□ 0.47
UBE2D3-207ENST00000394801 KLF18A0A0U1RQI7 1052 aa17.97■□□□□ 0.47
UBE2D3-207ENST00000394801 TRDNQ13061 729 aa17.97■□□□□ 0.47
UBE2D3-207ENST00000394801 DOCK2Q92608 1830 aa17.97■□□□□ 0.47
UBE2D3-207ENST00000394801 NR1I2O75469 434 aa17.97■□□□□ 0.47
UBE2D3-207ENST00000394801 RASGRF1Q13972 1273 aa17.97■□□□□ 0.47
UBE2D3-207ENST00000394801 CLEC4GQ6UXB4 293 aa17.97■□□□□ 0.47
UBE2D3-207ENST00000394801 ZNF396Q96N95 335 aaPredicted RBP17.97■□□□□ 0.47
UBE2D3-207ENST00000394801 ZNF831Q5JPB2 1677 aa17.97■□□□□ 0.47
UBE2D3-207ENST00000394801 ADCY5O95622 1261 aa17.96■□□□□ 0.47
UBE2D3-207ENST00000394801 MAP3K12Q12852 859 aa17.96■□□□□ 0.47
UBE2D3-207ENST00000394801 CAMK4Q16566 473 aa17.96■□□□□ 0.47
UBE2D3-207ENST00000394801 PATL2C9JE40 543 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms