RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 IL16Q14005 1332 aa19.66■□□□□ 0.74
CHMP3-202ENST00000393773 FKTNO75072 461 aa19.65■□□□□ 0.74
CHMP3-202ENST00000393773 KCNJ4P48050 445 aa19.65■□□□□ 0.74
CHMP3-202ENST00000393773 CCDC184Q52MB2 194 aa19.65■□□□□ 0.74
CHMP3-202ENST00000393773 MTMR14Q8NCE2 650 aa19.65■□□□□ 0.74
CHMP3-202ENST00000393773 LINS1Q8NG48 757 aa19.65■□□□□ 0.74
CHMP3-202ENST00000393773 DEFB129Q9H1M3 183 aa19.65■□□□□ 0.74
CHMP3-202ENST00000393773 FANCIQ9NVI1 1328 aa19.65■□□□□ 0.74
CHMP3-202ENST00000393773 FKBP5Q13451 457 aaPredicted RBP19.64■□□□□ 0.73
CHMP3-202ENST00000393773 PPP2R3BQ9Y5P8 575 aa19.64■□□□□ 0.73
CHMP3-202ENST00000393773 AOX1Q06278 1338 aa19.64■□□□□ 0.73
CHMP3-202ENST00000393773 DLGAP5Q15398 846 aa19.63■□□□□ 0.73
CHMP3-202ENST00000393773 CLMNQ96JQ2 1002 aa19.63■□□□□ 0.73
CHMP3-202ENST00000393773 ANKRD18BA2A2Z9 1011 aa19.62■□□□□ 0.73
CHMP3-202ENST00000393773 MANSC4A6NHS7 340 aaPredicted RBP19.62■□□□□ 0.73
CHMP3-202ENST00000393773 TAF5LO75529 589 aa19.62■□□□□ 0.73
CHMP3-202ENST00000393773 ALDH1A1P00352 501 aa19.62■□□□□ 0.73
CHMP3-202ENST00000393773 ZBTB48P10074 688 aaPredicted RBP19.62■□□□□ 0.73
CHMP3-202ENST00000393773 IL1R1P14778 569 aa19.62■□□□□ 0.73
CHMP3-202ENST00000393773 FOXO4P98177 505 aa19.62■□□□□ 0.73
CHMP3-202ENST00000393773 IFNL1Q8IU54 200 aa19.62■□□□□ 0.73
CHMP3-202ENST00000393773 WNK4Q96J92 1243 aa19.62■□□□□ 0.73
CHMP3-202ENST00000393773 SPDYE2BA6NHP3 402 aa19.61■□□□□ 0.73
CHMP3-202ENST00000393773 IGF2BP3O00425 579 aaKnown RBP eCLIP19.61■□□□□ 0.73
CHMP3-202ENST00000393773 SPDYE6P0CI01 402 aa19.61■□□□□ 0.73
CHMP3-202ENST00000393773 FKBP1AP62942 108 aaKnown RBP19.61■□□□□ 0.73
CHMP3-202ENST00000393773 HELBQ8NG08 1087 aaPredicted RBP19.61■□□□□ 0.73
CHMP3-202ENST00000393773 CLRN2A0PK11 232 aa19.6■□□□□ 0.73
CHMP3-202ENST00000393773 CFAP100Q494V2 611 aa19.6■□□□□ 0.73
CHMP3-202ENST00000393773 ZNF804AQ7Z570 1209 aa19.6■□□□□ 0.73
CHMP3-202ENST00000393773 KIAA0100Q14667 2235 aaKnown RBP19.59■□□□□ 0.73
CHMP3-202ENST00000393773 MYH13Q9UKX3 1938 aa19.59■□□□□ 0.73
CHMP3-202ENST00000393773 F8W031 263 aaPredicted RBP19.59■□□□□ 0.73
CHMP3-202ENST00000393773 IFIT5Q13325 482 aaKnown RBP19.59■□□□□ 0.73
CHMP3-202ENST00000393773 NCBP3Q53F19 620 aaKnown RBP19.59■□□□□ 0.73
CHMP3-202ENST00000393773 ZSWIM8A7E2V4 1837 aa19.58■□□□□ 0.73
CHMP3-202ENST00000393773 UNCXA6NJT0 531 aa19.58■□□□□ 0.72
CHMP3-202ENST00000393773 GJA5P36382 358 aa19.58■□□□□ 0.72
CHMP3-202ENST00000393773 INHBEP58166 350 aa19.58■□□□□ 0.72
CHMP3-202ENST00000393773 BEND3Q5T5X7 828 aa19.58■□□□□ 0.72
CHMP3-202ENST00000393773 OTOP1Q7RTM1 612 aa19.58■□□□□ 0.72
CHMP3-202ENST00000393773 SLC10A4Q96EP9 437 aa19.58■□□□□ 0.72
CHMP3-202ENST00000393773 PRMT6Q96LA8 375 aaPredicted RBP19.58■□□□□ 0.72
CHMP3-202ENST00000393773 JAG2Q9Y219 1238 aa19.58■□□□□ 0.72
CHMP3-202ENST00000393773 PPP1R12BO60237 982 aaPredicted RBP19.57■□□□□ 0.72
CHMP3-202ENST00000393773 VAMP4O75379 141 aa19.57■□□□□ 0.72
CHMP3-202ENST00000393773 EPHA10Q5JZY3 1008 aa19.57■□□□□ 0.72
CHMP3-202ENST00000393773 NBPF12Q5TAG4 269 aaPredicted RBP19.57■□□□□ 0.72
CHMP3-202ENST00000393773 VEZTQ9HBM0 779 aa19.57■□□□□ 0.72
CHMP3-202ENST00000393773 F6X3S4 739 aa19.56■□□□□ 0.72
CHMP3-202ENST00000393773 MYO1BO43795 1136 aa19.56■□□□□ 0.72
CHMP3-202ENST00000393773 CHMP3Q9Y3E7 222 aa19.56■□□□□ 0.72
CHMP3-202ENST00000393773 TRIM17Q9Y577 477 aa19.56■□□□□ 0.72
CHMP3-202ENST00000393773 FAM205AQ6ZU69 1335 aa19.55■□□□□ 0.72
CHMP3-202ENST00000393773 SUPT20HL1Q3ZLR7 823 aa19.55■□□□□ 0.72
CHMP3-202ENST00000393773 LMBR1LQ6UX01 489 aa19.55■□□□□ 0.72
CHMP3-202ENST00000393773 ZNF594Q96JF6 807 aaPredicted RBP19.55■□□□□ 0.72
CHMP3-202ENST00000393773 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.55■□□□□ 0.72
CHMP3-202ENST00000393773 USP2O75604 605 aaPredicted RBP19.54■□□□□ 0.72
CHMP3-202ENST00000393773 IREB2P48200 963 aaKnown RBP19.54■□□□□ 0.72
CHMP3-202ENST00000393773 CRHR2Q13324 411 aa19.54■□□□□ 0.72
CHMP3-202ENST00000393773 RASA3Q14644 834 aa19.54■□□□□ 0.72
CHMP3-202ENST00000393773 TESPA1A2RU30 521 aaPredicted RBP19.53■□□□□ 0.72
CHMP3-202ENST00000393773 POTEFA5A3E0 1075 aa19.53■□□□□ 0.72
CHMP3-202ENST00000393773 GRM8O00222 908 aa19.53■□□□□ 0.72
CHMP3-202ENST00000393773 CAP1Q01518 475 aa19.53■□□□□ 0.72
CHMP3-202ENST00000393773 EXOSC9Q06265 439 aaKnown RBP19.53■□□□□ 0.72
CHMP3-202ENST00000393773 SPDYE2Q495Y8 402 aa19.53■□□□□ 0.72
CHMP3-202ENST00000393773 ANKRD13AQ8IZ07 590 aa19.53■□□□□ 0.72
CHMP3-202ENST00000393773 CD99L2Q8TCZ2 262 aa19.53■□□□□ 0.72
CHMP3-202ENST00000393773 PTPN18Q99952 460 aa19.53■□□□□ 0.72
CHMP3-202ENST00000393773 LDHAL6AQ6ZMR3 332 aa19.52■□□□□ 0.72
CHMP3-202ENST00000393773 CDAN1Q8IWY9 1227 aa19.52■□□□□ 0.72
CHMP3-202ENST00000393773 ERO1AQ96HE7 468 aa19.52■□□□□ 0.72
CHMP3-202ENST00000393773 TEPSINQ96N21 525 aa19.52■□□□□ 0.72
CHMP3-202ENST00000393773 PTPN22Q9Y2R2 807 aa19.52■□□□□ 0.72
CHMP3-202ENST00000393773 RBM5P52756 815 aaKnown RBP eCLIP19.51■□□□□ 0.71
CHMP3-202ENST00000393773 TNFAIP1Q13829 316 aa19.51■□□□□ 0.71
CHMP3-202ENST00000393773 CCDC57Q2TAC2 916 aa19.51■□□□□ 0.71
CHMP3-202ENST00000393773 MFSD14BQ5SR56 506 aa19.51■□□□□ 0.71
CHMP3-202ENST00000393773 WDR63Q8IWG1 891 aa19.51■□□□□ 0.71
CHMP3-202ENST00000393773 TDRD7Q8NHU6 1098 aaKnown RBP19.51■□□□□ 0.71
CHMP3-202ENST00000393773 ZNF70Q9UC06 446 aaPredicted RBP19.51■□□□□ 0.71
CHMP3-202ENST00000393773 SERPINA10Q9UK55 444 aa19.51■□□□□ 0.71
CHMP3-202ENST00000393773 PLIN1O60240 522 aa19.5■□□□□ 0.71
CHMP3-202ENST00000393773 TAF7LQ5H9L4 462 aa19.5■□□□□ 0.71
CHMP3-202ENST00000393773 INTS3Q68E01 1043 aaKnown RBP19.5■□□□□ 0.71
CHMP3-202ENST00000393773 ARMC5Q96C12 935 aa19.5■□□□□ 0.71
CHMP3-202ENST00000393773 OPTNQ96CV9 577 aa19.5■□□□□ 0.71
CHMP3-202ENST00000393773 ELP3Q9H9T3 547 aa19.5■□□□□ 0.71
CHMP3-202ENST00000393773 SPINK5Q9NQ38 1064 aaPredicted RBP19.5■□□□□ 0.71
CHMP3-202ENST00000393773 CNNM1Q9NRU3 951 aa19.5■□□□□ 0.71
CHMP3-202ENST00000393773 GYG1P46976 350 aa19.49■□□□□ 0.71
CHMP3-202ENST00000393773 UBE4AQ14139 1066 aa19.49■□□□□ 0.71
CHMP3-202ENST00000393773 OTUD7BQ6GQQ9 843 aa19.49■□□□□ 0.71
CHMP3-202ENST00000393773 MS4A4AQ96JQ5 239 aa19.49■□□□□ 0.71
CHMP3-202ENST00000393773 TDRD3Q9H7E2 651 aaKnown RBP19.49■□□□□ 0.71
CHMP3-202ENST00000393773 TTF2Q9UNY4 1162 aaKnown RBP19.49■□□□□ 0.71
CHMP3-202ENST00000393773 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.48■□□□□ 0.71
CHMP3-202ENST00000393773 CNKSR2Q8WXI2 1034 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms